Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 RPS15AP34-201ENST00000487776 387 ntBASIC2.04□□□□□ -2.08
CXCL12P48061 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.04□□□□□ -2.08
CXCL12P48061 AC022447.3-201ENST00000506865 495 ntBASIC2.04□□□□□ -2.08
CXCL12P48061 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.04□□□□□ -2.08
CXCL12P48061 AC034244.1-201ENST00000507687 207 ntBASIC2.04□□□□□ -2.08
CXCL12P48061 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.04□□□□□ -2.08
CXCL12P48061 RNU6-1282P-201ENST00000516735 96 ntBASIC2.04□□□□□ -2.08
CXCL12P48061 RNA5SP471-201ENST00000516971 106 ntBASIC2.04□□□□□ -2.08
CXCL12P48061 HMGN1P28-201ENST00000521340 364 ntBASIC2.04□□□□□ -2.08
CXCL12P48061 OR4R1P-201ENST00000529879 463 ntBASIC2.04□□□□□ -2.08
CXCL12P48061 AC013828.2-201ENST00000532487 235 ntBASIC2.04□□□□□ -2.08
CXCL12P48061 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC2.04□□□□□ -2.08
CXCL12P48061 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC2.04□□□□□ -2.08
CXCL12P48061 HMGB1P14-201ENST00000557424 591 ntBASIC2.04□□□□□ -2.08
CXCL12P48061 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.04□□□□□ -2.08
CXCL12P48061 AC090888.1-201ENST00000561335 1141 ntBASIC2.04□□□□□ -2.08
CXCL12P48061 MYL12BP1-201ENST00000569826 507 ntBASIC2.04□□□□□ -2.08
CXCL12P48061 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC2.04□□□□□ -2.08
CXCL12P48061 AF038458.1-201ENST00000588406 262 ntBASIC2.04□□□□□ -2.08
CXCL12P48061 AC008739.2-201ENST00000597006 317 ntBASIC2.04□□□□□ -2.08
CXCL12P48061 BNIP3P23-201ENST00000599655 511 ntBASIC2.04□□□□□ -2.08
CXCL12P48061 AL356575.1-201ENST00000603008 283 ntBASIC2.04□□□□□ -2.08
CXCL12P48061 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CXCL12P48061 BCRP9-201ENST00000605312 388 ntBASIC2.04□□□□□ -2.08
CXCL12P48061 AC013244.3-201ENST00000605614 388 ntBASIC2.04□□□□□ -2.08
CXCL12P48061 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.04□□□□□ -2.08
CXCL12P48061 AC013476.2-201ENST00000614456 459 ntBASIC2.04□□□□□ -2.08
CXCL12P48061 AC010133.1-201ENST00000615809 842 ntBASIC2.04□□□□□ -2.08
CXCL12P48061 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.04□□□□□ -2.08
CXCL12P48061 AP002782.1-201ENST00000623107 614 ntBASIC2.04□□□□□ -2.08
CXCL12P48061 AC068787.1-201ENST00000623908 691 ntBASIC2.04□□□□□ -2.08
CXCL12P48061 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.04□□□□□ -2.08
CXCL12P48061 MIR4275-201ENST00000636486 87 ntBASIC2.04□□□□□ -2.08
CXCL12P48061 MAPK10-266ENST00000641066 6555 ntBASIC2.04□□□□□ -2.08
CXCL12P48061 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.03□□□□□ -2.08
CXCL12P48061 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.03□□□□□ -2.08
CXCL12P48061 MTND4P16-201ENST00000466108 1367 ntBASIC2.03□□□□□ -2.08
CXCL12P48061 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.03□□□□□ -2.08
CXCL12P48061 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
CXCL12P48061 RNU6-1200P-201ENST00000384162 107 ntBASIC2.03□□□□□ -2.08
CXCL12P48061 RNU6-1035P-201ENST00000384477 107 ntBASIC2.03□□□□□ -2.08
CXCL12P48061 AL109755.1-201ENST00000401791 649 ntBASIC2.03□□□□□ -2.08
CXCL12P48061 FGF7P8-201ENST00000402994 292 ntBASIC2.03□□□□□ -2.08
CXCL12P48061 CCNG1P1-201ENST00000406783 885 ntBASIC2.03□□□□□ -2.08
CXCL12P48061 AC099548.1-201ENST00000421443 426 ntBASIC2.03□□□□□ -2.08
CXCL12P48061 AL022400.1-201ENST00000423946 935 ntBASIC2.03□□□□□ -2.08
CXCL12P48061 MTND1P20-201ENST00000430341 950 ntBASIC2.03□□□□□ -2.08
CXCL12P48061 RPL35AP22-201ENST00000436855 335 ntBASIC2.03□□□□□ -2.08
CXCL12P48061 RPS15AP7-201ENST00000439294 405 ntBASIC2.03□□□□□ -2.08
CXCL12P48061 BNIP3P2-201ENST00000441221 577 ntBASIC2.03□□□□□ -2.08
CXCL12P48061 PIGFP3-201ENST00000441918 722 ntBASIC2.03□□□□□ -2.08
CXCL12P48061 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.03□□□□□ -2.08
CXCL12P48061 Z73417.1-201ENST00000447373 778 ntBASIC2.03□□□□□ -2.08
CXCL12P48061 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC2.03□□□□□ -2.08
CXCL12P48061 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.03□□□□□ -2.08
CXCL12P48061 OR6C5P-201ENST00000452388 923 ntBASIC2.03□□□□□ -2.08
CXCL12P48061 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.03□□□□□ -2.08
CXCL12P48061 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.03□□□□□ -2.08
CXCL12P48061 RPL23AP63-201ENST00000498752 471 ntBASIC2.03□□□□□ -2.08
CXCL12P48061 LTV1P1-201ENST00000510683 1237 ntBASIC2.03□□□□□ -2.08
CXCL12P48061 TBCAP3-201ENST00000512475 312 ntBASIC2.03□□□□□ -2.08
CXCL12P48061 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.03□□□□□ -2.08
CXCL12P48061 MRPS36P3-201ENST00000519284 130 ntBASIC2.03□□□□□ -2.08
CXCL12P48061 MTCO1P47-201ENST00000523889 1271 ntBASIC2.03□□□□□ -2.08
CXCL12P48061 AP000889.2-201ENST00000532684 490 ntBASIC2.03□□□□□ -2.08
CXCL12P48061 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.03□□□□□ -2.08
CXCL12P48061 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.03□□□□□ -2.08
CXCL12P48061 AL354943.1-201ENST00000572103 781 ntBASIC2.03□□□□□ -2.08
CXCL12P48061 AL356280.1-201ENST00000603614 379 ntBASIC2.03□□□□□ -2.08
CXCL12P48061 TUSC7.1-201ENST00000610969 165 ntBASIC2.03□□□□□ -2.08
CXCL12P48061 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CXCL12P48061 AC093838.1-201ENST00000613014 469 ntBASIC2.03□□□□□ -2.08
CXCL12P48061 AL161629.2-201ENST00000615347 275 ntBASIC2.03□□□□□ -2.08
CXCL12P48061 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.03□□□□□ -2.08
CXCL12P48061 AC012150.2-201ENST00000621300 544 ntBASIC2.03□□□□□ -2.08
CXCL12P48061 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.03□□□□□ -2.08
CXCL12P48061 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
CXCL12P48061 AC010680.1-201ENST00000590024 3590 ntBASIC2.03□□□□□ -2.08
CXCL12P48061 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CXCL12P48061 AC131280.1-202ENST00000624067 4211 ntBASIC2.03□□□□□ -2.08
CXCL12P48061 AC092125.1-201ENST00000562568 1995 ntBASIC2.03□□□□□ -2.08
CXCL12P48061 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CXCL12P48061 MTND4P35-201ENST00000604257 1375 ntBASIC2.02□□□□□ -2.09
CXCL12P48061 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CXCL12P48061 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CXCL12P48061 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.02□□□□□ -2.09
CXCL12P48061 RNU6-769P-201ENST00000384407 104 ntBASIC2.02□□□□□ -2.09
CXCL12P48061 TAS2R15P-201ENST00000390674 928 ntBASIC2.02□□□□□ -2.09
CXCL12P48061 TXNP7-201ENST00000406296 293 ntBASIC2.02□□□□□ -2.09
CXCL12P48061 MIR1305-201ENST00000408300 86 ntBASIC2.02□□□□□ -2.09
CXCL12P48061 AL139156.1-201ENST00000412785 841 ntBASIC2.02□□□□□ -2.09
CXCL12P48061 RPL22P18-201ENST00000417197 377 ntBASIC2.02□□□□□ -2.09
CXCL12P48061 AL451054.2-201ENST00000420896 202 ntBASIC2.02□□□□□ -2.09
CXCL12P48061 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.02□□□□□ -2.09
CXCL12P48061 MTND2P9-201ENST00000422293 931 ntBASIC2.02□□□□□ -2.09
CXCL12P48061 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.02□□□□□ -2.09
CXCL12P48061 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC2.02□□□□□ -2.09
CXCL12P48061 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.02□□□□□ -2.09
CXCL12P48061 Z80107.1-201ENST00000436830 412 ntBASIC2.02□□□□□ -2.09
CXCL12P48061 AL714022.1-201ENST00000439897 151 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms