Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.85□□□□□ -1.95
NEDD4P46934 AC137800.2-201ENST00000574375 120 ntBASIC2.85□□□□□ -1.95
NEDD4P46934 NRBF2P1-201ENST00000587407 859 ntBASIC2.85□□□□□ -1.95
NEDD4P46934 AL358072.1-201ENST00000604156 575 ntBASIC2.85□□□□□ -1.95
NEDD4P46934 AC064872.1-201ENST00000604823 1072 ntBASIC2.85□□□□□ -1.95
NEDD4P46934 AC090578.1-201ENST00000604955 591 ntBASIC2.85□□□□□ -1.95
NEDD4P46934 AC090132.2-201ENST00000615881 347 ntBASIC2.85□□□□□ -1.95
NEDD4P46934 AL136313.1-201ENST00000624804 202 ntBASIC2.85□□□□□ -1.95
NEDD4P46934 PISRT1-201ENST00000626175 531 ntBASIC2.85□□□□□ -1.95
NEDD4P46934 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.85□□□□□ -1.95
NEDD4P46934 AL359693.1-201ENST00000614959 2407 ntBASIC2.84□□□□□ -1.95
NEDD4P46934 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.84□□□□□ -1.95
NEDD4P46934 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
NEDD4P46934 U8.8-201ENST00000365399 135 ntBASIC2.84□□□□□ -1.96
NEDD4P46934 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.84□□□□□ -1.96
NEDD4P46934 RNU1-39P-201ENST00000383897 165 ntBASIC2.84□□□□□ -1.96
NEDD4P46934 RNU6-1197P-201ENST00000391183 107 ntBASIC2.84□□□□□ -1.96
NEDD4P46934 AL359634.1-202ENST00000404721 284 ntBASIC2.84□□□□□ -1.96
NEDD4P46934 RNU6-248P-201ENST00000410720 107 ntBASIC2.84□□□□□ -1.96
NEDD4P46934 AL513331.1-201ENST00000411908 397 ntBASIC2.84□□□□□ -1.96
NEDD4P46934 RPS15AP12-201ENST00000419498 388 ntBASIC2.84□□□□□ -1.96
NEDD4P46934 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC2.84□□□□□ -1.96
NEDD4P46934 MTCO2P34-201ENST00000421994 607 ntBASIC2.84□□□□□ -1.96
NEDD4P46934 TMEM167AP1-201ENST00000423409 219 ntBASIC2.84□□□□□ -1.96
NEDD4P46934 RPS12P2-201ENST00000439728 269 ntBASIC2.84□□□□□ -1.96
NEDD4P46934 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.84□□□□□ -1.96
NEDD4P46934 AC009237.8-201ENST00000445492 379 ntBASIC2.84□□□□□ -1.96
NEDD4P46934 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.84□□□□□ -1.96
NEDD4P46934 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.84□□□□□ -1.96
NEDD4P46934 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC2.84□□□□□ -1.96
NEDD4P46934 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.84□□□□□ -1.96
NEDD4P46934 NDUFB4P2-201ENST00000509515 391 ntBASIC2.84□□□□□ -1.96
NEDD4P46934 AC114797.1-201ENST00000514003 728 ntBASIC2.84□□□□□ -1.96
NEDD4P46934 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.84□□□□□ -1.96
NEDD4P46934 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.84□□□□□ -1.96
NEDD4P46934 NRON-201ENST00000517270 370 ntBASIC2.84□□□□□ -1.96
NEDD4P46934 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.84□□□□□ -1.96
NEDD4P46934 AC124947.2-202ENST00000552735 133 ntBASIC2.84□□□□□ -1.96
NEDD4P46934 AC006362.1-201ENST00000567392 174 ntBASIC2.84□□□□□ -1.96
NEDD4P46934 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.84□□□□□ -1.96
NEDD4P46934 RSL24D1P11-201ENST00000591045 491 ntBASIC2.84□□□□□ -1.96
NEDD4P46934 AL451064.1-201ENST00000607718 471 ntBASIC2.84□□□□□ -1.96
NEDD4P46934 AC009570.1-201ENST00000609599 745 ntBASIC2.84□□□□□ -1.96
NEDD4P46934 AC046143.2-201ENST00000609789 160 ntBASIC2.84□□□□□ -1.96
NEDD4P46934 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.96
NEDD4P46934 CTSLP2-204ENST00000629029 392 ntBASIC2.84□□□□□ -1.96
NEDD4P46934 IGHVIII-44-202ENST00000636235 289 ntBASIC2.84□□□□□ -1.96
NEDD4P46934 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.84□□□□□ -1.96
NEDD4P46934 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.96
NEDD4P46934 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.84□□□□□ -1.96
NEDD4P46934 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
NEDD4P46934 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
NEDD4P46934 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.83□□□□□ -1.96
NEDD4P46934 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
NEDD4P46934 U8.3-201ENST00000363321 132 ntBASIC2.83□□□□□ -1.96
NEDD4P46934 SNORA1.3-201ENST00000384676 136 ntBASIC2.83□□□□□ -1.96
NEDD4P46934 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
NEDD4P46934 FAT1P1-201ENST00000406588 507 ntBASIC2.83□□□□□ -1.96
NEDD4P46934 AL451054.2-201ENST00000420896 202 ntBASIC2.83□□□□□ -1.96
NEDD4P46934 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.83□□□□□ -1.96
NEDD4P46934 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.83□□□□□ -1.96
NEDD4P46934 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.83□□□□□ -1.96
NEDD4P46934 AC009961.2-201ENST00000435771 251 ntBASIC2.83□□□□□ -1.96
NEDD4P46934 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.83□□□□□ -1.96
NEDD4P46934 AL353706.1-201ENST00000436728 494 ntBASIC2.83□□□□□ -1.96
NEDD4P46934 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.83□□□□□ -1.96
NEDD4P46934 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.83□□□□□ -1.96
NEDD4P46934 AC104389.3-201ENST00000445629 235 ntBASIC2.83□□□□□ -1.96
NEDD4P46934 AL136380.1-201ENST00000447970 162 ntBASIC2.83□□□□□ -1.96
NEDD4P46934 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.83□□□□□ -1.96
NEDD4P46934 GAPDHP17-201ENST00000449858 1001 ntBASIC2.83□□□□□ -1.96
NEDD4P46934 SNORD97-201ENST00000459187 142 ntBASIC2.83□□□□□ -1.96
NEDD4P46934 AC012181.1-201ENST00000479895 423 ntBASIC2.83□□□□□ -1.96
NEDD4P46934 RPL30P5-201ENST00000494923 336 ntBASIC2.83□□□□□ -1.96
NEDD4P46934 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.83□□□□□ -1.96
NEDD4P46934 MTND4LP22-201ENST00000508209 276 ntBASIC2.83□□□□□ -1.96
NEDD4P46934 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.83□□□□□ -1.96
NEDD4P46934 AC026436.1-201ENST00000510537 270 ntBASIC2.83□□□□□ -1.96
NEDD4P46934 AC079140.3-201ENST00000511111 550 ntBASIC2.83□□□□□ -1.96
NEDD4P46934 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
NEDD4P46934 RN7SKP282-201ENST00000516824 299 ntBASIC2.83□□□□□ -1.96
NEDD4P46934 SNORA31.26-201ENST00000517250 137 ntBASIC2.83□□□□□ -1.96
NEDD4P46934 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.83□□□□□ -1.96
NEDD4P46934 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
NEDD4P46934 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.83□□□□□ -1.96
NEDD4P46934 AC040904.1-201ENST00000590850 223 ntBASIC2.83□□□□□ -1.96
NEDD4P46934 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
NEDD4P46934 AC011939.3-201ENST00000613686 466 ntBASIC2.83□□□□□ -1.96
NEDD4P46934 AC010678.1-201ENST00000614118 713 ntBASIC2.83□□□□□ -1.96
NEDD4P46934 AC006338.1-201ENST00000618453 749 ntBASIC2.83□□□□□ -1.96
NEDD4P46934 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.83□□□□□ -1.96
NEDD4P46934 MIR1291-201ENST00000627649 87 ntBASIC2.83□□□□□ -1.96
NEDD4P46934 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
NEDD4P46934 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
NEDD4P46934 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.83□□□□□ -1.96
NEDD4P46934 OR4G2P-202ENST00000641004 1759 ntBASIC2.83□□□□□ -1.96
NEDD4P46934 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.82□□□□□ -1.96
NEDD4P46934 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
NEDD4P46934 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
NEDD4P46934 RNU6-511P-201ENST00000363496 107 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms