Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
RPL28P46779 AL109620.1-201ENST00000618738 1197 ntBASIC1.31□□□□□ -2.2
RPL28P46779 MIR6852-201ENST00000621699 66 ntBASIC1.31□□□□□ -2.2
RPL28P46779 AL158801.5-201ENST00000623123 465 ntBASIC1.31□□□□□ -2.2
RPL28P46779 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.31□□□□□ -2.2
RPL28P46779 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.31□□□□□ -2.2
RPL28P46779 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
RPL28P46779 Z75746.1-201ENST00000440243 2080 ntBASIC1.3□□□□□ -2.2
RPL28P46779 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
RPL28P46779 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.3□□□□□ -2.2
RPL28P46779 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
RPL28P46779 NACAP2-201ENST00000318548 624 ntBASIC1.3□□□□□ -2.2
RPL28P46779 RNU6-744P-201ENST00000365557 107 ntBASIC1.3□□□□□ -2.2
RPL28P46779 RNU6-1316P-201ENST00000384242 108 ntBASIC1.3□□□□□ -2.2
RPL28P46779 RNU6-658P-201ENST00000384606 106 ntBASIC1.3□□□□□ -2.2
RPL28P46779 MIR95-201ENST00000385072 81 ntBASIC1.3□□□□□ -2.2
RPL28P46779 MIR676-201ENST00000390702 67 ntBASIC1.3□□□□□ -2.2
RPL28P46779 RSL24D1P4-201ENST00000400938 484 ntBASIC1.3□□□□□ -2.2
RPL28P46779 RN7SKP192-201ENST00000411291 327 ntBASIC1.3□□□□□ -2.2
RPL28P46779 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC1.3□□□□□ -2.2
RPL28P46779 DPH3P2-201ENST00000422618 250 ntBASIC1.3□□□□□ -2.2
RPL28P46779 XKRYP1-201ENST00000423438 492 ntBASIC1.3□□□□□ -2.2
RPL28P46779 GPM6BP2-201ENST00000432046 144 ntBASIC1.3□□□□□ -2.2
RPL28P46779 XKRYP2-201ENST00000432915 492 ntBASIC1.3□□□□□ -2.2
RPL28P46779 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.3□□□□□ -2.2
RPL28P46779 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.3□□□□□ -2.2
RPL28P46779 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC1.3□□□□□ -2.2
RPL28P46779 AC009238.1-201ENST00000442165 424 ntBASIC1.3□□□□□ -2.2
RPL28P46779 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.3□□□□□ -2.2
RPL28P46779 GPM6BP1-201ENST00000446387 144 ntBASIC1.3□□□□□ -2.2
RPL28P46779 AC009237.6-201ENST00000446969 424 ntBASIC1.3□□□□□ -2.2
RPL28P46779 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.3□□□□□ -2.2
RPL28P46779 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.3□□□□□ -2.2
RPL28P46779 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.3□□□□□ -2.2
RPL28P46779 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.3□□□□□ -2.2
RPL28P46779 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC1.3□□□□□ -2.2
RPL28P46779 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.3□□□□□ -2.2
RPL28P46779 UBE2DNL-203ENST00000474922 222 ntBASIC1.3□□□□□ -2.2
RPL28P46779 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC1.3□□□□□ -2.2
RPL28P46779 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.3□□□□□ -2.2
RPL28P46779 AC093281.2-201ENST00000510153 597 ntBASIC1.3□□□□□ -2.2
RPL28P46779 AC024589.1-201ENST00000512207 263 ntBASIC1.3□□□□□ -2.2
RPL28P46779 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
RPL28P46779 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC1.3□□□□□ -2.2
RPL28P46779 RNU6-150P-201ENST00000516237 95 ntBASIC1.3□□□□□ -2.2
RPL28P46779 RNU6-390P-201ENST00000516259 103 ntBASIC1.3□□□□□ -2.2
RPL28P46779 RN7SKP258-201ENST00000517151 304 ntBASIC1.3□□□□□ -2.2
RPL28P46779 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.3□□□□□ -2.2
RPL28P46779 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.3□□□□□ -2.2
RPL28P46779 AC087894.1-201ENST00000538359 518 ntBASIC1.3□□□□□ -2.2
RPL28P46779 AL132657.2-201ENST00000564417 358 ntBASIC1.3□□□□□ -2.2
RPL28P46779 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.3□□□□□ -2.2
RPL28P46779 MIR4299-201ENST00000577899 72 ntBASIC1.3□□□□□ -2.2
RPL28P46779 AC022662.1-201ENST00000580252 331 ntBASIC1.3□□□□□ -2.2
RPL28P46779 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC1.3□□□□□ -2.2
RPL28P46779 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC1.3□□□□□ -2.2
RPL28P46779 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.3□□□□□ -2.2
RPL28P46779 AC073544.2-201ENST00000601155 540 ntBASIC1.3□□□□□ -2.2
RPL28P46779 AL355297.2-201ENST00000604792 129 ntBASIC1.3□□□□□ -2.2
RPL28P46779 AL590808.1-201ENST00000618696 141 ntBASIC1.3□□□□□ -2.2
RPL28P46779 MIR5739-201ENST00000619803 80 ntBASIC1.3□□□□□ -2.2
RPL28P46779 AC064859.1-201ENST00000624741 174 ntBASIC1.3□□□□□ -2.2
RPL28P46779 ZNF702P-202ENST00000434269 1966 ntBASIC1.3□□□□□ -2.2
RPL28P46779 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.3□□□□□ -2.2
RPL28P46779 AL390862.1-201ENST00000635467 1469 ntBASIC1.3□□□□□ -2.2
RPL28P46779 AC006020.1-201ENST00000420179 1854 ntBASIC1.29□□□□□ -2.2
RPL28P46779 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.29□□□□□ -2.2
RPL28P46779 MIR449A-201ENST00000362113 91 ntBASIC1.29□□□□□ -2.2
RPL28P46779 RNU6-234P-201ENST00000365229 104 ntBASIC1.29□□□□□ -2.2
RPL28P46779 RNA5SP240-201ENST00000365355 128 ntBASIC1.29□□□□□ -2.2
RPL28P46779 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.29□□□□□ -2.2
RPL28P46779 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
RPL28P46779 AL021407.1-201ENST00000404531 386 ntBASIC1.29□□□□□ -2.2
RPL28P46779 AL590084.1-201ENST00000407885 387 ntBASIC1.29□□□□□ -2.2
RPL28P46779 RNA5SP450-201ENST00000411206 102 ntBASIC1.29□□□□□ -2.2
RPL28P46779 USP9YP6-201ENST00000413550 854 ntBASIC1.29□□□□□ -2.2
RPL28P46779 AC097463.2-201ENST00000421074 142 ntBASIC1.29□□□□□ -2.2
RPL28P46779 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.29□□□□□ -2.2
RPL28P46779 AC013262.1-201ENST00000426710 252 ntBASIC1.29□□□□□ -2.2
RPL28P46779 RPL36AP53-201ENST00000432891 316 ntBASIC1.29□□□□□ -2.2
RPL28P46779 RPL7P34-201ENST00000433316 712 ntBASIC1.29□□□□□ -2.2
RPL28P46779 GTF2IP3-201ENST00000433887 494 ntBASIC1.29□□□□□ -2.2
RPL28P46779 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
RPL28P46779 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC1.29□□□□□ -2.2
RPL28P46779 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.29□□□□□ -2.2
RPL28P46779 AC093809.1-201ENST00000509155 340 ntBASIC1.29□□□□□ -2.2
RPL28P46779 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.29□□□□□ -2.2
RPL28P46779 SNORA31.23-201ENST00000517219 133 ntBASIC1.29□□□□□ -2.2
RPL28P46779 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.29□□□□□ -2.2
RPL28P46779 AC107953.1-201ENST00000522216 297 ntBASIC1.29□□□□□ -2.2
RPL28P46779 AC021451.1-201ENST00000523498 1129 ntBASIC1.29□□□□□ -2.2
RPL28P46779 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.29□□□□□ -2.2
RPL28P46779 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.29□□□□□ -2.2
RPL28P46779 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.29□□□□□ -2.2
RPL28P46779 MEG8-218ENST00000556720 456 ntTSL 3 BASIC1.29□□□□□ -2.2
RPL28P46779 AC024614.2-201ENST00000577584 372 ntBASIC1.29□□□□□ -2.2
RPL28P46779 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.29□□□□□ -2.2
RPL28P46779 AC008507.2-201ENST00000588402 1176 ntBASIC1.29□□□□□ -2.2
RPL28P46779 AC091057.3-201ENST00000602684 733 ntBASIC1.29□□□□□ -2.2
RPL28P46779 AC004987.4-201ENST00000603383 338 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms