Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 VPS26BP1-201ENST00000417155 755 ntBASIC2.36□□□□□ -2.03
SSR1P43307 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC2.36□□□□□ -2.03
SSR1P43307 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.36□□□□□ -2.03
SSR1P43307 ELOCP14-201ENST00000428070 331 ntBASIC2.36□□□□□ -2.03
SSR1P43307 AC244035.1-201ENST00000430042 390 ntBASIC2.36□□□□□ -2.03
SSR1P43307 ELOCP7-201ENST00000439968 331 ntBASIC2.36□□□□□ -2.03
SSR1P43307 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.36□□□□□ -2.03
SSR1P43307 OR6C5P-201ENST00000452388 923 ntBASIC2.36□□□□□ -2.03
SSR1P43307 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC2.36□□□□□ -2.03
SSR1P43307 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.36□□□□□ -2.03
SSR1P43307 AC055855.1-201ENST00000489563 579 ntBASIC2.36□□□□□ -2.03
SSR1P43307 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC2.36□□□□□ -2.03
SSR1P43307 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.36□□□□□ -2.03
SSR1P43307 LRRC37A5P-203ENST00000580181 585 ntBASIC2.36□□□□□ -2.03
SSR1P43307 AC024619.4-201ENST00000580924 316 ntBASIC2.36□□□□□ -2.03
SSR1P43307 MIR3199-1-201ENST00000582434 88 ntBASIC2.36□□□□□ -2.03
SSR1P43307 MIR4293-201ENST00000584305 78 ntBASIC2.36□□□□□ -2.03
SSR1P43307 MTCO2P2-201ENST00000591258 225 ntBASIC2.36□□□□□ -2.03
SSR1P43307 RPP40P2-201ENST00000603596 712 ntBASIC2.36□□□□□ -2.03
SSR1P43307 AL161798.1-201ENST00000604630 131 ntBASIC2.36□□□□□ -2.03
SSR1P43307 AC007938.3-201ENST00000604965 623 ntBASIC2.36□□□□□ -2.03
SSR1P43307 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
SSR1P43307 AL391834.2-201ENST00000609982 546 ntBASIC2.36□□□□□ -2.03
SSR1P43307 AC009159.1-201ENST00000618386 642 ntBASIC2.36□□□□□ -2.03
SSR1P43307 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.36□□□□□ -2.03
SSR1P43307 AC010889.1-201ENST00000566193 2666 ntBASIC2.35□□□□□ -2.03
SSR1P43307 AL354685.2-201ENST00000448218 1447 ntBASIC2.35□□□□□ -2.03
SSR1P43307 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC2.35□□□□□ -2.03
SSR1P43307 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.35□□□□□ -2.03
SSR1P43307 RNU6-778P-201ENST00000363269 103 ntBASIC2.35□□□□□ -2.03
SSR1P43307 RNU4-92P-201ENST00000363783 136 ntBASIC2.35□□□□□ -2.03
SSR1P43307 U3.12-201ENST00000364498 214 ntBASIC2.35□□□□□ -2.03
SSR1P43307 SNORA67.4-201ENST00000384688 142 ntBASIC2.35□□□□□ -2.03
SSR1P43307 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
SSR1P43307 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.35□□□□□ -2.03
SSR1P43307 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.35□□□□□ -2.03
SSR1P43307 USP9YP13-201ENST00000417797 480 ntBASIC2.35□□□□□ -2.03
SSR1P43307 ELOCP9-201ENST00000418624 239 ntBASIC2.35□□□□□ -2.03
SSR1P43307 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.35□□□□□ -2.03
SSR1P43307 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.35□□□□□ -2.03
SSR1P43307 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC2.35□□□□□ -2.03
SSR1P43307 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.35□□□□□ -2.03
SSR1P43307 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.35□□□□□ -2.03
SSR1P43307 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.35□□□□□ -2.03
SSR1P43307 AC068781.1-201ENST00000488231 618 ntBASIC2.35□□□□□ -2.03
SSR1P43307 AC034222.1-201ENST00000494052 532 ntBASIC2.35□□□□□ -2.03
SSR1P43307 AC026801.1-201ENST00000497178 464 ntBASIC2.35□□□□□ -2.03
SSR1P43307 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
SSR1P43307 SNORA25.11-201ENST00000515935 105 ntBASIC2.35□□□□□ -2.03
SSR1P43307 RNU6-927P-201ENST00000516199 100 ntBASIC2.35□□□□□ -2.03
SSR1P43307 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC2.35□□□□□ -2.03
SSR1P43307 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC2.35□□□□□ -2.03
SSR1P43307 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.35□□□□□ -2.03
SSR1P43307 MIR5007-201ENST00000583098 95 ntBASIC2.35□□□□□ -2.03
SSR1P43307 AC008121.1-201ENST00000603244 268 ntBASIC2.35□□□□□ -2.03
SSR1P43307 BCRP9-201ENST00000605312 388 ntBASIC2.35□□□□□ -2.03
SSR1P43307 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
SSR1P43307 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.35□□□□□ -2.03
SSR1P43307 AL589743.7-201ENST00000612637 233 ntBASIC2.35□□□□□ -2.03
SSR1P43307 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC2.35□□□□□ -2.03
SSR1P43307 U2.21-201ENST00000637295 81 ntBASIC2.35□□□□□ -2.03
SSR1P43307 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
SSR1P43307 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
SSR1P43307 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
SSR1P43307 UBE2L2-201ENST00000254302 429 ntBASIC2.34□□□□□ -2.03
SSR1P43307 RNA5SP289-201ENST00000362332 137 ntBASIC2.34□□□□□ -2.03
SSR1P43307 RNU6-462P-201ENST00000362659 105 ntBASIC2.34□□□□□ -2.03
SSR1P43307 MIR221-201ENST00000385135 110 ntBASIC2.34□□□□□ -2.03
SSR1P43307 GSTA9P-201ENST00000406231 611 ntBASIC2.34□□□□□ -2.03
SSR1P43307 USP9YP26-201ENST00000421008 661 ntBASIC2.34□□□□□ -2.03
SSR1P43307 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.34□□□□□ -2.03
SSR1P43307 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC2.34□□□□□ -2.03
SSR1P43307 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.34□□□□□ -2.03
SSR1P43307 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.34□□□□□ -2.03
SSR1P43307 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.34□□□□□ -2.03
SSR1P43307 USP9YP24-201ENST00000434374 697 ntBASIC2.34□□□□□ -2.03
SSR1P43307 AC004854.1-201ENST00000440356 349 ntBASIC2.34□□□□□ -2.03
SSR1P43307 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
SSR1P43307 USP9YP17-201ENST00000444617 696 ntBASIC2.34□□□□□ -2.03
SSR1P43307 HIGD1AP2-201ENST00000446367 280 ntBASIC2.34□□□□□ -2.03
SSR1P43307 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.34□□□□□ -2.03
SSR1P43307 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
SSR1P43307 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.34□□□□□ -2.03
SSR1P43307 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.34□□□□□ -2.03
SSR1P43307 AC010186.2-204ENST00000537668 439 ntBASIC2.34□□□□□ -2.03
SSR1P43307 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC2.34□□□□□ -2.03
SSR1P43307 AC009097.3-201ENST00000563557 1018 ntBASIC2.34□□□□□ -2.03
SSR1P43307 TMF1P1-201ENST00000576058 373 ntBASIC2.34□□□□□ -2.03
SSR1P43307 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.34□□□□□ -2.03
SSR1P43307 AL109918.3-201ENST00000603072 338 ntBASIC2.34□□□□□ -2.03
SSR1P43307 AC012493.3-201ENST00000604494 112 ntBASIC2.34□□□□□ -2.03
SSR1P43307 AL355472.4-201ENST00000610233 626 ntBASIC2.34□□□□□ -2.03
SSR1P43307 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.34□□□□□ -2.03
SSR1P43307 AL607023.1-201ENST00000620045 248 ntBASIC2.34□□□□□ -2.03
SSR1P43307 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
SSR1P43307 PISRT1-201ENST00000626175 531 ntBASIC2.34□□□□□ -2.03
SSR1P43307 AC243829.7-201ENST00000633081 225 ntBASIC2.34□□□□□ -2.03
SSR1P43307 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.34□□□□□ -2.04
SSR1P43307 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
SSR1P43307 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms