Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCNFP41002 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCNFP41002 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.43□□□□□ -1.7
CCNFP41002 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCNFP41002 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.43□□□□□ -1.7
CCNFP41002 ZNF72P-201ENST00000425869 1908 ntBASIC4.42□□□□□ -1.7
CCNFP41002 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CCNFP41002 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.42□□□□□ -1.7
CCNFP41002 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCNFP41002 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCNFP41002 RNU6-600P-201ENST00000362524 99 ntBASIC4.42□□□□□ -1.7
CCNFP41002 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
CCNFP41002 MIR192-201ENST00000384915 110 ntBASIC4.42□□□□□ -1.7
CCNFP41002 AL513475.1-201ENST00000406602 315 ntBASIC4.42□□□□□ -1.7
CCNFP41002 MIR1911-201ENST00000410783 80 ntBASIC4.42□□□□□ -1.7
CCNFP41002 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.42□□□□□ -1.7
CCNFP41002 CYP4F29P-201ENST00000420685 446 ntBASIC4.42□□□□□ -1.7
CCNFP41002 RPS12P10-201ENST00000427031 377 ntBASIC4.42□□□□□ -1.7
CCNFP41002 TOMM20P4-201ENST00000427861 435 ntBASIC4.42□□□□□ -1.7
CCNFP41002 HMGB1P12-201ENST00000438594 598 ntBASIC4.42□□□□□ -1.7
CCNFP41002 DAP3P1-201ENST00000441522 278 ntBASIC4.42□□□□□ -1.7
CCNFP41002 AC012671.1-201ENST00000451912 203 ntBASIC4.42□□□□□ -1.7
CCNFP41002 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.42□□□□□ -1.7
CCNFP41002 HMGN2P13-201ENST00000476476 274 ntBASIC4.42□□□□□ -1.7
CCNFP41002 RPL17P19-201ENST00000489069 552 ntBASIC4.42□□□□□ -1.7
CCNFP41002 AL160314.1-201ENST00000490836 438 ntBASIC4.42□□□□□ -1.7
CCNFP41002 PARP4P3-201ENST00000510265 317 ntBASIC4.42□□□□□ -1.7
CCNFP41002 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC4.42□□□□□ -1.7
CCNFP41002 AP000827.1-201ENST00000527814 258 ntBASIC4.42□□□□□ -1.7
CCNFP41002 CBX3P8-201ENST00000532412 525 ntBASIC4.42□□□□□ -1.7
CCNFP41002 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC4.42□□□□□ -1.7
CCNFP41002 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.42□□□□□ -1.7
CCNFP41002 SNORD58B-201ENST00000607313 66 ntBASIC4.42□□□□□ -1.7
CCNFP41002 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
CCNFP41002 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCNFP41002 AC066616.2-201ENST00000559334 1481 ntBASIC4.42□□□□□ -1.7
CCNFP41002 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CCNFP41002 OR56B2P-202ENST00000641377 2453 ntBASIC4.41□□□□□ -1.7
CCNFP41002 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.41□□□□□ -1.7
CCNFP41002 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.41□□□□□ -1.7
CCNFP41002 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCNFP41002 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CCNFP41002 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCNFP41002 RNY3P11-201ENST00000364153 102 ntBASIC4.41□□□□□ -1.7
CCNFP41002 RNU6-1317P-201ENST00000364582 104 ntBASIC4.41□□□□□ -1.7
CCNFP41002 RNU6-1318P-201ENST00000365389 103 ntBASIC4.41□□□□□ -1.7
CCNFP41002 RNU6-823P-201ENST00000391042 103 ntBASIC4.41□□□□□ -1.7
CCNFP41002 Y_RNA.618-201ENST00000410949 107 ntBASIC4.41□□□□□ -1.7
CCNFP41002 AC114482.1-201ENST00000418010 247 ntBASIC4.41□□□□□ -1.7
CCNFP41002 CBX3P6-201ENST00000430257 527 ntBASIC4.41□□□□□ -1.7
CCNFP41002 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.41□□□□□ -1.7
CCNFP41002 RPL23AP93-201ENST00000440847 484 ntBASIC4.41□□□□□ -1.7
CCNFP41002 AL583843.1-201ENST00000456070 346 ntBASIC4.41□□□□□ -1.7
CCNFP41002 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.41□□□□□ -1.7
CCNFP41002 RN7SL354P-201ENST00000469282 294 ntBASIC4.41□□□□□ -1.7
CCNFP41002 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.41□□□□□ -1.7
CCNFP41002 AC022447.4-201ENST00000504053 364 ntBASIC4.41□□□□□ -1.7
CCNFP41002 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.41□□□□□ -1.7
CCNFP41002 MRPS35P2-201ENST00000508242 191 ntBASIC4.41□□□□□ -1.7
CCNFP41002 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC4.41□□□□□ -1.7
CCNFP41002 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.41□□□□□ -1.7
CCNFP41002 AC007991.1-201ENST00000522680 631 ntBASIC4.41□□□□□ -1.7
CCNFP41002 ATP5F1P5-201ENST00000526403 760 ntBASIC4.41□□□□□ -1.7
CCNFP41002 AC084851.1-201ENST00000529105 249 ntBASIC4.41□□□□□ -1.7
CCNFP41002 AP001781.1-201ENST00000530977 207 ntBASIC4.41□□□□□ -1.7
CCNFP41002 SUB1P3-201ENST00000564581 315 ntBASIC4.41□□□□□ -1.7
CCNFP41002 RMST_4.1-201ENST00000616886 107 ntBASIC4.41□□□□□ -1.7
CCNFP41002 FP236240.3-201ENST00000623061 327 ntBASIC4.41□□□□□ -1.7
CCNFP41002 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CCNFP41002 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCNFP41002 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCNFP41002 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC4.41□□□□□ -1.7
CCNFP41002 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.41□□□□□ -1.7
CCNFP41002 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.41□□□□□ -1.7
CCNFP41002 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCNFP41002 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CCNFP41002 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.4□□□□□ -1.7
CCNFP41002 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
CCNFP41002 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
CCNFP41002 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CCNFP41002 MIR412-201ENST00000362142 91 ntBASIC4.4□□□□□ -1.71
CCNFP41002 Y_RNA.512-201ENST00000384518 102 ntBASIC4.4□□□□□ -1.71
CCNFP41002 MIR521-1-201ENST00000384902 87 ntBASIC4.4□□□□□ -1.71
CCNFP41002 MIR659-201ENST00000384963 97 ntBASIC4.4□□□□□ -1.71
CCNFP41002 RPL23AP48-201ENST00000406913 488 ntBASIC4.4□□□□□ -1.71
CCNFP41002 RNU6-174P-201ENST00000410406 106 ntBASIC4.4□□□□□ -1.71
CCNFP41002 AC016397.1-201ENST00000412463 242 ntBASIC4.4□□□□□ -1.71
CCNFP41002 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.4□□□□□ -1.71
CCNFP41002 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC4.4□□□□□ -1.71
CCNFP41002 PIGFP3-201ENST00000441918 722 ntBASIC4.4□□□□□ -1.71
CCNFP41002 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.4□□□□□ -1.71
CCNFP41002 OR2AQ1P-201ENST00000451972 200 ntBASIC4.4□□□□□ -1.71
CCNFP41002 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC4.4□□□□□ -1.71
CCNFP41002 RPS20P22-201ENST00000473700 357 ntBASIC4.4□□□□□ -1.71
CCNFP41002 KC877373.1-201ENST00000479066 408 ntBASIC4.4□□□□□ -1.71
CCNFP41002 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.4□□□□□ -1.71
CCNFP41002 HMGN1P11-201ENST00000508668 303 ntBASIC4.4□□□□□ -1.71
CCNFP41002 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.4□□□□□ -1.71
CCNFP41002 RNA5SP497-201ENST00000516081 97 ntBASIC4.4□□□□□ -1.71
CCNFP41002 SNORA70.16-201ENST00000516390 95 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms