Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 Z82217.1-201ENST00000625157 8149 ntBASIC4.2□□□□□ -1.74
LTBRP36941 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
LTBRP36941 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
LTBRP36941 Y_RNA.245-201ENST00000364493 95 ntBASIC4.2□□□□□ -1.74
LTBRP36941 RNU6-1279P-201ENST00000383917 103 ntBASIC4.2□□□□□ -1.74
LTBRP36941 Y_RNA.496-201ENST00000384444 101 ntBASIC4.2□□□□□ -1.74
LTBRP36941 RNU1-44P-201ENST00000384453 163 ntBASIC4.2□□□□□ -1.74
LTBRP36941 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LTBRP36941 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LTBRP36941 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
LTBRP36941 MIR1290-201ENST00000408735 78 ntBASIC4.2□□□□□ -1.74
LTBRP36941 AC008267.5-201ENST00000424928 265 ntBASIC4.2□□□□□ -1.74
LTBRP36941 AC007919.1-201ENST00000429380 217 ntBASIC4.2□□□□□ -1.74
LTBRP36941 USP9YP7-201ENST00000436723 430 ntBASIC4.2□□□□□ -1.74
LTBRP36941 USP9YP32-201ENST00000452432 430 ntBASIC4.2□□□□□ -1.74
LTBRP36941 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC4.2□□□□□ -1.74
LTBRP36941 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.2□□□□□ -1.74
LTBRP36941 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.2□□□□□ -1.74
LTBRP36941 RNU6-264P-201ENST00000517134 104 ntBASIC4.2□□□□□ -1.74
LTBRP36941 RNU6-1073P-201ENST00000517182 106 ntBASIC4.2□□□□□ -1.74
LTBRP36941 RNA5SP179-201ENST00000517284 121 ntBASIC4.2□□□□□ -1.74
LTBRP36941 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.2□□□□□ -1.74
LTBRP36941 ATP5F1P5-201ENST00000526403 760 ntBASIC4.2□□□□□ -1.74
LTBRP36941 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.2□□□□□ -1.74
LTBRP36941 AC004024.1-201ENST00000549244 247 ntBASIC4.2□□□□□ -1.74
LTBRP36941 AL117187.1-201ENST00000555482 181 ntBASIC4.2□□□□□ -1.74
LTBRP36941 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.2□□□□□ -1.74
LTBRP36941 AC109446.1-201ENST00000566172 220 ntBASIC4.2□□□□□ -1.74
LTBRP36941 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.2□□□□□ -1.74
LTBRP36941 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.2□□□□□ -1.74
LTBRP36941 AC091167.4-201ENST00000605079 184 ntBASIC4.2□□□□□ -1.74
LTBRP36941 AC123912.5-201ENST00000605470 343 ntBASIC4.2□□□□□ -1.74
LTBRP36941 AL121655.1-201ENST00000605811 308 ntBASIC4.2□□□□□ -1.74
LTBRP36941 U3.45-201ENST00000607547 219 ntBASIC4.2□□□□□ -1.74
LTBRP36941 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.2□□□□□ -1.74
LTBRP36941 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LTBRP36941 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LTBRP36941 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.2□□□□□ -1.74
LTBRP36941 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LTBRP36941 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LTBRP36941 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.2□□□□□ -1.74
LTBRP36941 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
LTBRP36941 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.19□□□□□ -1.74
LTBRP36941 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
LTBRP36941 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
LTBRP36941 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
LTBRP36941 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
LTBRP36941 Y_RNA.428-201ENST00000384078 102 ntBASIC4.19□□□□□ -1.74
LTBRP36941 RNU6-574P-201ENST00000384265 107 ntBASIC4.19□□□□□ -1.74
LTBRP36941 RNU6-196P-201ENST00000384315 107 ntBASIC4.19□□□□□ -1.74
LTBRP36941 Y_RNA.527-201ENST00000384573 102 ntBASIC4.19□□□□□ -1.74
LTBRP36941 RN7SKP167-201ENST00000411047 285 ntBASIC4.19□□□□□ -1.74
LTBRP36941 AL035423.1-201ENST00000420331 213 ntBASIC4.19□□□□□ -1.74
LTBRP36941 AC243428.1-201ENST00000421099 264 ntBASIC4.19□□□□□ -1.74
LTBRP36941 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC4.19□□□□□ -1.74
LTBRP36941 RPS26P2-201ENST00000440331 348 ntBASIC4.19□□□□□ -1.74
LTBRP36941 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC4.19□□□□□ -1.74
LTBRP36941 IPO7P1-201ENST00000442031 636 ntBASIC4.19□□□□□ -1.74
LTBRP36941 AC073587.1-201ENST00000447093 876 ntBASIC4.19□□□□□ -1.74
LTBRP36941 FABP5P15-201ENST00000453566 214 ntBASIC4.19□□□□□ -1.74
LTBRP36941 HMGB3P30-201ENST00000457863 606 ntBASIC4.19□□□□□ -1.74
LTBRP36941 AC008571.1-201ENST00000467232 300 ntBASIC4.19□□□□□ -1.74
LTBRP36941 RPS23P3-201ENST00000470993 430 ntBASIC4.19□□□□□ -1.74
LTBRP36941 AC011005.2-201ENST00000487324 359 ntBASIC4.19□□□□□ -1.74
LTBRP36941 HMGB3P16-201ENST00000508037 287 ntBASIC4.19□□□□□ -1.74
LTBRP36941 AC104619.4-201ENST00000510773 249 ntBASIC4.19□□□□□ -1.74
LTBRP36941 SNORA31.8-201ENST00000516327 108 ntBASIC4.19□□□□□ -1.74
LTBRP36941 RNU6-764P-201ENST00000516396 105 ntBASIC4.19□□□□□ -1.74
LTBRP36941 RNA5SP290-201ENST00000517133 127 ntBASIC4.19□□□□□ -1.74
LTBRP36941 SNORD116.3-201ENST00000517176 78 ntBASIC4.19□□□□□ -1.74
LTBRP36941 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.19□□□□□ -1.74
LTBRP36941 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.19□□□□□ -1.74
LTBRP36941 AC025627.2-201ENST00000576220 160 ntBASIC4.19□□□□□ -1.74
LTBRP36941 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC4.19□□□□□ -1.74
LTBRP36941 AC090132.2-201ENST00000615881 347 ntBASIC4.19□□□□□ -1.74
LTBRP36941 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.19□□□□□ -1.74
LTBRP36941 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
LTBRP36941 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.19□□□□□ -1.74
LTBRP36941 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
LTBRP36941 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC4.19□□□□□ -1.74
LTBRP36941 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.19□□□□□ -1.74
LTBRP36941 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.18□□□□□ -1.74
LTBRP36941 AP001642.1-201ENST00000624727 2117 ntBASIC4.18□□□□□ -1.74
LTBRP36941 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
LTBRP36941 U1.1-201ENST00000384101 164 ntBASIC4.18□□□□□ -1.74
LTBRP36941 RNU6-790P-201ENST00000384479 105 ntBASIC4.18□□□□□ -1.74
LTBRP36941 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
LTBRP36941 RNU6-55P-201ENST00000411092 107 ntBASIC4.18□□□□□ -1.74
LTBRP36941 AL030996.1-201ENST00000411430 235 ntBASIC4.18□□□□□ -1.74
LTBRP36941 AL133396.1-201ENST00000432048 687 ntBASIC4.18□□□□□ -1.74
LTBRP36941 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC4.18□□□□□ -1.74
LTBRP36941 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.18□□□□□ -1.74
LTBRP36941 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.18□□□□□ -1.74
LTBRP36941 Vault.1-201ENST00000516474 102 ntBASIC4.18□□□□□ -1.74
LTBRP36941 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.18□□□□□ -1.74
LTBRP36941 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.18□□□□□ -1.74
LTBRP36941 AL162373.1-201ENST00000620433 407 ntBASIC4.18□□□□□ -1.74
LTBRP36941 TTK-211ENST00000627129 240 ntTSL 5 BASIC4.18□□□□□ -1.74
LTBRP36941 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
LTBRP36941 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms