Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
KRT9P35527 RNA5SP274-201ENST00000410484 108 ntBASIC3.35□□□□□ -1.87
KRT9P35527 RNU4-47P-201ENST00000410876 114 ntBASIC3.35□□□□□ -1.87
KRT9P35527 AC114491.1-201ENST00000416095 246 ntBASIC3.35□□□□□ -1.87
KRT9P35527 BX295541.1-201ENST00000417774 250 ntBASIC3.35□□□□□ -1.87
KRT9P35527 AL109913.1-201ENST00000421173 514 ntBASIC3.35□□□□□ -1.87
KRT9P35527 MTCO2P34-201ENST00000421994 607 ntBASIC3.35□□□□□ -1.87
KRT9P35527 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3.35□□□□□ -1.87
KRT9P35527 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.35□□□□□ -1.87
KRT9P35527 AC005326.1-201ENST00000429197 123 ntBASIC3.35□□□□□ -1.87
KRT9P35527 RPL36AP6-201ENST00000435770 321 ntBASIC3.35□□□□□ -1.87
KRT9P35527 RPS15AP5-201ENST00000436276 388 ntBASIC3.35□□□□□ -1.87
KRT9P35527 Z75741.1-201ENST00000446793 314 ntBASIC3.35□□□□□ -1.87
KRT9P35527 RPL37P4-201ENST00000448908 268 ntBASIC3.35□□□□□ -1.87
KRT9P35527 RN7SL601P-201ENST00000471221 293 ntBASIC3.35□□□□□ -1.87
KRT9P35527 AC109925.1-201ENST00000478069 331 ntBASIC3.35□□□□□ -1.87
KRT9P35527 AC126182.1-201ENST00000478134 357 ntBASIC3.35□□□□□ -1.87
KRT9P35527 AC105252.1-201ENST00000503089 286 ntBASIC3.35□□□□□ -1.87
KRT9P35527 HSPD1P15-201ENST00000505573 1122 ntBASIC3.35□□□□□ -1.87
KRT9P35527 AC117522.1-201ENST00000509821 380 ntBASIC3.35□□□□□ -1.87
KRT9P35527 SCARNA13-201ENST00000516672 275 ntBASIC3.35□□□□□ -1.87
KRT9P35527 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.35□□□□□ -1.87
KRT9P35527 AC090572.1-201ENST00000519251 160 ntBASIC3.35□□□□□ -1.87
KRT9P35527 SUB1P1-201ENST00000524415 382 ntBASIC3.35□□□□□ -1.87
KRT9P35527 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
KRT9P35527 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.35□□□□□ -1.87
KRT9P35527 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.35□□□□□ -1.87
KRT9P35527 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.35□□□□□ -1.87
KRT9P35527 AC006362.1-201ENST00000567392 174 ntBASIC3.35□□□□□ -1.87
KRT9P35527 AGGF1P4-201ENST00000568249 801 ntBASIC3.35□□□□□ -1.87
KRT9P35527 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.35□□□□□ -1.87
KRT9P35527 AC078795.2-201ENST00000602835 1252 ntBASIC3.35□□□□□ -1.87
KRT9P35527 AC245014.2-201ENST00000603689 287 ntBASIC3.35□□□□□ -1.87
KRT9P35527 AL355598.1-201ENST00000604169 202 ntBASIC3.35□□□□□ -1.87
KRT9P35527 AC246785.4-201ENST00000605374 287 ntBASIC3.35□□□□□ -1.87
KRT9P35527 AC006566.1-201ENST00000608943 513 ntBASIC3.35□□□□□ -1.87
KRT9P35527 AC109347.2-201ENST00000610220 349 ntBASIC3.35□□□□□ -1.87
KRT9P35527 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.35□□□□□ -1.87
KRT9P35527 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.35□□□□□ -1.87
KRT9P35527 AC138932.5-201ENST00000617759 563 ntBASIC3.35□□□□□ -1.87
KRT9P35527 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
KRT9P35527 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
KRT9P35527 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.34□□□□□ -1.87
KRT9P35527 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
KRT9P35527 RNA5SP267-201ENST00000364893 126 ntBASIC3.34□□□□□ -1.87
KRT9P35527 SNORA51.4-201ENST00000364993 124 ntBASIC3.34□□□□□ -1.87
KRT9P35527 RNA5SP120-201ENST00000410900 112 ntBASIC3.34□□□□□ -1.87
KRT9P35527 RN7SKP58-201ENST00000411010 305 ntBASIC3.34□□□□□ -1.87
KRT9P35527 AC023141.4-201ENST00000412031 328 ntBASIC3.34□□□□□ -1.87
KRT9P35527 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.34□□□□□ -1.87
KRT9P35527 BPY2DP-201ENST00000422208 265 ntBASIC3.34□□□□□ -1.87
KRT9P35527 AL158156.1-201ENST00000422509 473 ntBASIC3.34□□□□□ -1.87
KRT9P35527 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.34□□□□□ -1.87
KRT9P35527 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.34□□□□□ -1.87
KRT9P35527 HMGB1P9-201ENST00000429856 646 ntBASIC3.34□□□□□ -1.87
KRT9P35527 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.34□□□□□ -1.87
KRT9P35527 RPL23AP58-201ENST00000440453 469 ntBASIC3.34□□□□□ -1.87
KRT9P35527 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.34□□□□□ -1.87
KRT9P35527 RN7SL863P-201ENST00000462370 296 ntBASIC3.34□□□□□ -1.87
KRT9P35527 SRRM1P2-201ENST00000464531 1192 ntBASIC3.34□□□□□ -1.87
KRT9P35527 KLF3P2-201ENST00000465138 268 ntBASIC3.34□□□□□ -1.87
KRT9P35527 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.34□□□□□ -1.87
KRT9P35527 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.34□□□□□ -1.87
KRT9P35527 AC108078.2-201ENST00000510750 236 ntBASIC3.34□□□□□ -1.87
KRT9P35527 AC074250.1-201ENST00000511117 192 ntBASIC3.34□□□□□ -1.87
KRT9P35527 AC022447.1-201ENST00000515358 464 ntBASIC3.34□□□□□ -1.87
KRT9P35527 AP003122.3-201ENST00000526316 255 ntBASIC3.34□□□□□ -1.87
KRT9P35527 AC084851.1-201ENST00000529105 249 ntBASIC3.34□□□□□ -1.87
KRT9P35527 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.34□□□□□ -1.87
KRT9P35527 MIR5680-201ENST00000577577 84 ntBASIC3.34□□□□□ -1.87
KRT9P35527 MIR4528-201ENST00000577763 90 ntBASIC3.34□□□□□ -1.87
KRT9P35527 MIR4801-201ENST00000582704 82 ntBASIC3.34□□□□□ -1.87
KRT9P35527 AL021997.1-201ENST00000605757 193 ntBASIC3.34□□□□□ -1.87
KRT9P35527 AL121992.2-201ENST00000606262 256 ntBASIC3.34□□□□□ -1.87
KRT9P35527 AC098614.4-201ENST00000607601 462 ntBASIC3.34□□□□□ -1.87
KRT9P35527 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
KRT9P35527 WT1-AS_8.1-201ENST00000615200 275 ntBASIC3.34□□□□□ -1.87
KRT9P35527 AC099842.1-201ENST00000619919 596 ntBASIC3.34□□□□□ -1.87
KRT9P35527 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
KRT9P35527 AL359740.1-201ENST00000624340 592 ntBASIC3.34□□□□□ -1.87
KRT9P35527 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.34□□□□□ -1.87
KRT9P35527 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
KRT9P35527 AC092435.3-201ENST00000565538 3654 ntBASIC3.34□□□□□ -1.88
KRT9P35527 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
KRT9P35527 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
KRT9P35527 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.33□□□□□ -1.88
KRT9P35527 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
KRT9P35527 SNORD15B-201ENST00000384714 146 ntBASIC3.33□□□□□ -1.88
KRT9P35527 RNVU1-14-201ENST00000384770 164 ntBASIC3.33□□□□□ -1.88
KRT9P35527 MIR301A-201ENST00000385261 86 ntBASIC3.33□□□□□ -1.88
KRT9P35527 AL031121.1-201ENST00000406553 254 ntBASIC3.33□□□□□ -1.88
KRT9P35527 UBE2V1P10-201ENST00000414685 269 ntBASIC3.33□□□□□ -1.88
KRT9P35527 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.33□□□□□ -1.88
KRT9P35527 MTCYBP5-201ENST00000423752 1135 ntBASIC3.33□□□□□ -1.88
KRT9P35527 AL353729.1-201ENST00000425044 720 ntBASIC3.33□□□□□ -1.88
KRT9P35527 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.33□□□□□ -1.88
KRT9P35527 AC093151.1-201ENST00000427711 313 ntBASIC3.33□□□□□ -1.88
KRT9P35527 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC3.33□□□□□ -1.88
KRT9P35527 MTCYBP1-201ENST00000454315 1119 ntBASIC3.33□□□□□ -1.88
KRT9P35527 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms