Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.14□□□□□ -1.75
HOXC12P31275 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC4.14□□□□□ -1.75
HOXC12P31275 CPDP1-201ENST00000579660 283 ntBASIC4.14□□□□□ -1.75
HOXC12P31275 MIR4503-201ENST00000582187 83 ntBASIC4.14□□□□□ -1.75
HOXC12P31275 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.14□□□□□ -1.75
HOXC12P31275 AC104695.3-201ENST00000604052 296 ntBASIC4.14□□□□□ -1.75
HOXC12P31275 AC136601.2-201ENST00000604356 474 ntBASIC4.14□□□□□ -1.75
HOXC12P31275 AP000787.2-201ENST00000604432 568 ntBASIC4.14□□□□□ -1.75
HOXC12P31275 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.14□□□□□ -1.75
HOXC12P31275 FP236240.3-201ENST00000623061 327 ntBASIC4.14□□□□□ -1.75
HOXC12P31275 AC099506.2-201ENST00000623074 221 ntBASIC4.14□□□□□ -1.75
HOXC12P31275 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.14□□□□□ -1.75
HOXC12P31275 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HOXC12P31275 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HOXC12P31275 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HOXC12P31275 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HOXC12P31275 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.14□□□□□ -1.75
HOXC12P31275 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
HOXC12P31275 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HOXC12P31275 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.14□□□□□ -1.75
HOXC12P31275 AC126323.6-202ENST00000568092 3511 ntBASIC4.13□□□□□ -1.75
HOXC12P31275 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
HOXC12P31275 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.13□□□□□ -1.75
HOXC12P31275 ZNF137P-201ENST00000456718 1920 ntBASIC4.13□□□□□ -1.75
HOXC12P31275 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HOXC12P31275 AL359693.1-201ENST00000614959 2407 ntBASIC4.13□□□□□ -1.75
HOXC12P31275 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HOXC12P31275 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HOXC12P31275 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HOXC12P31275 RNU6-99P-201ENST00000364721 107 ntBASIC4.13□□□□□ -1.75
HOXC12P31275 Y_RNA.314-201ENST00000365114 102 ntBASIC4.13□□□□□ -1.75
HOXC12P31275 Y_RNA.389-201ENST00000383924 113 ntBASIC4.13□□□□□ -1.75
HOXC12P31275 Y_RNA.455-201ENST00000384230 98 ntBASIC4.13□□□□□ -1.75
HOXC12P31275 MIR34A-201ENST00000385130 110 ntBASIC4.13□□□□□ -1.75
HOXC12P31275 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
HOXC12P31275 AP000580.1-201ENST00000404439 358 ntBASIC4.13□□□□□ -1.75
HOXC12P31275 RNU2-23P-201ENST00000410545 195 ntBASIC4.13□□□□□ -1.75
HOXC12P31275 AC009237.10-201ENST00000414112 510 ntBASIC4.13□□□□□ -1.75
HOXC12P31275 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC4.13□□□□□ -1.75
HOXC12P31275 Z82210.1-201ENST00000440037 231 ntBASIC4.13□□□□□ -1.75
HOXC12P31275 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC4.13□□□□□ -1.75
HOXC12P31275 AC092798.1-201ENST00000458542 409 ntBASIC4.13□□□□□ -1.75
HOXC12P31275 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC4.13□□□□□ -1.75
HOXC12P31275 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.13□□□□□ -1.75
HOXC12P31275 HMGN2P13-201ENST00000476476 274 ntBASIC4.13□□□□□ -1.75
HOXC12P31275 RPL21P129-201ENST00000491732 478 ntBASIC4.13□□□□□ -1.75
HOXC12P31275 SCARNA22-201ENST00000503991 125 ntBASIC4.13□□□□□ -1.75
HOXC12P31275 AC022447.4-201ENST00000504053 364 ntBASIC4.13□□□□□ -1.75
HOXC12P31275 HMGB3P16-201ENST00000508037 287 ntBASIC4.13□□□□□ -1.75
HOXC12P31275 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.13□□□□□ -1.75
HOXC12P31275 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC4.13□□□□□ -1.75
HOXC12P31275 RNA5SP392-201ENST00000516905 112 ntBASIC4.13□□□□□ -1.75
HOXC12P31275 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.13□□□□□ -1.75
HOXC12P31275 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.13□□□□□ -1.75
HOXC12P31275 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC4.13□□□□□ -1.75
HOXC12P31275 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.13□□□□□ -1.75
HOXC12P31275 AC008121.1-201ENST00000603244 268 ntBASIC4.13□□□□□ -1.75
HOXC12P31275 AC010205.1-201ENST00000616668 449 ntBASIC4.13□□□□□ -1.75
HOXC12P31275 AC011944.2-201ENST00000624440 683 ntBASIC4.13□□□□□ -1.75
HOXC12P31275 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HOXC12P31275 AC125257.1-201ENST00000560400 2930 ntBASIC4.13□□□□□ -1.75
HOXC12P31275 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.13□□□□□ -1.75
HOXC12P31275 AC091812.1-201ENST00000432235 1948 ntBASIC4.13□□□□□ -1.75
HOXC12P31275 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
HOXC12P31275 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.13□□□□□ -1.75
HOXC12P31275 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.12□□□□□ -1.75
HOXC12P31275 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.12□□□□□ -1.75
HOXC12P31275 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
HOXC12P31275 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
HOXC12P31275 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HOXC12P31275 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
HOXC12P31275 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
HOXC12P31275 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HOXC12P31275 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HOXC12P31275 RNU6-166P-201ENST00000384371 107 ntBASIC4.12□□□□□ -1.75
HOXC12P31275 RNU6-1197P-201ENST00000391183 107 ntBASIC4.12□□□□□ -1.75
HOXC12P31275 Y_RNA.645-201ENST00000391229 102 ntBASIC4.12□□□□□ -1.75
HOXC12P31275 MIR548F4-201ENST00000408515 105 ntBASIC4.12□□□□□ -1.75
HOXC12P31275 HMGB3P2-201ENST00000411913 584 ntBASIC4.12□□□□□ -1.75
HOXC12P31275 MTCYBP9-201ENST00000431021 303 ntBASIC4.12□□□□□ -1.75
HOXC12P31275 SNRPEP9-201ENST00000436794 238 ntBASIC4.12□□□□□ -1.75
HOXC12P31275 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.12□□□□□ -1.75
HOXC12P31275 AC069499.1-201ENST00000489433 509 ntBASIC4.12□□□□□ -1.75
HOXC12P31275 AC105758.1-201ENST00000506038 399 ntBASIC4.12□□□□□ -1.75
HOXC12P31275 MTCO2P24-201ENST00000515611 426 ntBASIC4.12□□□□□ -1.75
HOXC12P31275 AC007991.1-201ENST00000522680 631 ntBASIC4.12□□□□□ -1.75
HOXC12P31275 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HOXC12P31275 AC103996.1-201ENST00000555468 102 ntBASIC4.12□□□□□ -1.75
HOXC12P31275 AC007224.1-201ENST00000564410 144 ntBASIC4.12□□□□□ -1.75
HOXC12P31275 AC093249.4-201ENST00000564755 259 ntBASIC4.12□□□□□ -1.75
HOXC12P31275 MIR4644-201ENST00000579929 84 ntBASIC4.12□□□□□ -1.75
HOXC12P31275 AC009314.1-201ENST00000603871 304 ntBASIC4.12□□□□□ -1.75
HOXC12P31275 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.12□□□□□ -1.75
HOXC12P31275 AC138627.2-201ENST00000624202 601 ntBASIC4.12□□□□□ -1.75
HOXC12P31275 MPP6-209ENST00000625307 126 ntTSL 5 BASIC4.12□□□□□ -1.75
HOXC12P31275 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.12□□□□□ -1.75
HOXC12P31275 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.12□□□□□ -1.75
HOXC12P31275 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
HOXC12P31275 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HOXC12P31275 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms