Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC1.02□□□□□ -2.25
CLIP1P30622 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.02□□□□□ -2.25
CLIP1P30622 MIR8087-201ENST00000612745 78 ntBASIC1.02□□□□□ -2.25
CLIP1P30622 AC004852.3-201ENST00000614131 326 ntBASIC1.02□□□□□ -2.25
CLIP1P30622 AC091925.1-201ENST00000623204 462 ntBASIC1.02□□□□□ -2.25
CLIP1P30622 AC015726.3-201ENST00000624501 418 ntBASIC1.02□□□□□ -2.25
CLIP1P30622 RNA5SP347-201ENST00000362445 119 ntBASIC1.01□□□□□ -2.25
CLIP1P30622 RNU6-1187P-201ENST00000364771 110 ntBASIC1.01□□□□□ -2.25
CLIP1P30622 SNORA70.7-201ENST00000384159 133 ntBASIC1.01□□□□□ -2.25
CLIP1P30622 RN7SKP158-201ENST00000410453 326 ntBASIC1.01□□□□□ -2.25
CLIP1P30622 HMGB1P9-201ENST00000429856 646 ntBASIC1.01□□□□□ -2.25
CLIP1P30622 Z77249.1-201ENST00000444622 1175 ntBASIC1.01□□□□□ -2.25
CLIP1P30622 TPTE2P6-202ENST00000445572 1007 ntBASIC1.01□□□□□ -2.25
CLIP1P30622 MTND2P8-201ENST00000450555 1025 ntBASIC1.01□□□□□ -2.25
CLIP1P30622 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.01□□□□□ -2.25
CLIP1P30622 AC108078.1-201ENST00000508073 725 ntBASIC1.01□□□□□ -2.25
CLIP1P30622 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.01□□□□□ -2.25
CLIP1P30622 RNA5SP121-201ENST00000516537 101 ntBASIC1.01□□□□□ -2.25
CLIP1P30622 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC1.01□□□□□ -2.25
CLIP1P30622 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.01□□□□□ -2.25
CLIP1P30622 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC1.01□□□□□ -2.25
CLIP1P30622 LINC02211-204ENST00000642024 1070 ntBASIC1.01□□□□□ -2.25
CLIP1P30622 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC1.01□□□□□ -2.25
CLIP1P30622 RNU6-670P-201ENST00000364312 104 ntBASIC1□□□□□ -2.25
CLIP1P30622 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
CLIP1P30622 SNORD26-201ENST00000384147 75 ntBASIC1□□□□□ -2.25
CLIP1P30622 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1□□□□□ -2.25
CLIP1P30622 RNA5SP212-201ENST00000391223 107 ntBASIC1□□□□□ -2.25
CLIP1P30622 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC1□□□□□ -2.25
CLIP1P30622 MTCO3P12-201ENST00000416718 547 ntBASIC1□□□□□ -2.25
CLIP1P30622 TOMM22P2-201ENST00000430735 237 ntBASIC1□□□□□ -2.25
CLIP1P30622 MTND5P15-201ENST00000434246 349 ntBASIC1□□□□□ -2.25
CLIP1P30622 PTENP1-201ENST00000447117 1215 ntBASIC1□□□□□ -2.25
CLIP1P30622 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1□□□□□ -2.25
CLIP1P30622 AC008379.1-201ENST00000463655 464 ntBASIC1□□□□□ -2.25
CLIP1P30622 RPL31P60-201ENST00000478450 367 ntBASIC1□□□□□ -2.25
CLIP1P30622 AC093752.1-206ENST00000511823 336 ntBASIC1□□□□□ -2.25
CLIP1P30622 AC133963.2-201ENST00000513686 578 ntBASIC1□□□□□ -2.25
CLIP1P30622 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1□□□□□ -2.25
CLIP1P30622 AC008945.2-201ENST00000606056 604 ntBASIC1□□□□□ -2.25
CLIP1P30622 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC1□□□□□ -2.25
CLIP1P30622 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1□□□□□ -2.25
CLIP1P30622 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1□□□□□ -2.25
CLIP1P30622 Y_RNA.433-201ENST00000384089 102 ntBASIC0.99□□□□□ -2.25
CLIP1P30622 MIR767-201ENST00000390228 109 ntBASIC0.99□□□□□ -2.25
CLIP1P30622 AL139397.2-201ENST00000404529 772 ntBASIC0.99□□□□□ -2.25
CLIP1P30622 AC092047.1-201ENST00000424997 240 ntBASIC0.99□□□□□ -2.25
CLIP1P30622 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC0.99□□□□□ -2.25
CLIP1P30622 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.99□□□□□ -2.25
CLIP1P30622 RPL30P5-201ENST00000494923 336 ntBASIC0.99□□□□□ -2.25
CLIP1P30622 AC067942.3-201ENST00000512025 362 ntBASIC0.99□□□□□ -2.25
CLIP1P30622 AP003072.2-201ENST00000527756 676 ntBASIC0.99□□□□□ -2.25
CLIP1P30622 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.99□□□□□ -2.25
CLIP1P30622 AC107954.1-201ENST00000565906 727 ntBASIC0.99□□□□□ -2.25
CLIP1P30622 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC0.99□□□□□ -2.25
CLIP1P30622 PCNAP1-202ENST00000595299 752 ntBASIC0.99□□□□□ -2.25
CLIP1P30622 AC016925.2-201ENST00000605108 242 ntBASIC0.99□□□□□ -2.25
CLIP1P30622 AC090970.3-201ENST00000612566 866 ntBASIC0.99□□□□□ -2.25
CLIP1P30622 Y_RNA.85-201ENST00000363014 111 ntBASIC0.98□□□□□ -2.25
CLIP1P30622 MIR515-2-201ENST00000384883 83 ntBASIC0.98□□□□□ -2.25
CLIP1P30622 MIR515-1-201ENST00000384884 83 ntBASIC0.98□□□□□ -2.25
CLIP1P30622 MIR618-201ENST00000385287 98 ntBASIC0.98□□□□□ -2.25
CLIP1P30622 AL358176.2-201ENST00000425769 204 ntBASIC0.98□□□□□ -2.25
CLIP1P30622 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC0.98□□□□□ -2.25
CLIP1P30622 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC0.98□□□□□ -2.25
CLIP1P30622 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC0.98□□□□□ -2.25
CLIP1P30622 AC104806.1-201ENST00000508720 308 ntBASIC0.98□□□□□ -2.25
CLIP1P30622 AC090132.2-201ENST00000615881 347 ntBASIC0.98□□□□□ -2.25
CLIP1P30622 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC0.98□□□□□ -2.25
CLIP1P30622 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC0.98□□□□□ -2.25
CLIP1P30622 RNU6-220P-201ENST00000390919 107 ntBASIC0.98□□□□□ -2.25
CLIP1P30622 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
CLIP1P30622 TATDN1P1-201ENST00000414123 891 ntBASIC0.98□□□□□ -2.25
CLIP1P30622 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC0.98□□□□□ -2.25
CLIP1P30622 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.98□□□□□ -2.25
CLIP1P30622 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC0.98□□□□□ -2.25
CLIP1P30622 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC0.98□□□□□ -2.25
CLIP1P30622 RPL39P28-201ENST00000465655 155 ntBASIC0.98□□□□□ -2.25
CLIP1P30622 AP003484.1-201ENST00000530974 250 ntBASIC0.98□□□□□ -2.25
CLIP1P30622 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC0.98□□□□□ -2.25
CLIP1P30622 AC104229.1-201ENST00000561364 255 ntBASIC0.98□□□□□ -2.25
CLIP1P30622 MIR3198-2-201ENST00000577868 80 ntBASIC0.98□□□□□ -2.25
CLIP1P30622 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC0.98□□□□□ -2.25
CLIP1P30622 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC0.98□□□□□ -2.25
CLIP1P30622 RNU6-16P-201ENST00000384385 107 ntBASIC0.97□□□□□ -2.25
CLIP1P30622 MIR146A-201ENST00000385201 99 ntBASIC0.97□□□□□ -2.25
CLIP1P30622 PIGPP2-201ENST00000411569 458 ntBASIC0.97□□□□□ -2.25
CLIP1P30622 AC241584.1-201ENST00000438469 1241 ntBASIC0.97□□□□□ -2.25
CLIP1P30622 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC0.97□□□□□ -2.25
CLIP1P30622 Z82190.1-201ENST00000454534 490 ntBASIC0.97□□□□□ -2.25
CLIP1P30622 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC0.97□□□□□ -2.25
CLIP1P30622 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC0.97□□□□□ -2.25
CLIP1P30622 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC0.97□□□□□ -2.25
CLIP1P30622 AC025588.2-201ENST00000604851 466 ntBASIC0.97□□□□□ -2.25
CLIP1P30622 AC106900.2-201ENST00000604994 317 ntBASIC0.97□□□□□ -2.25
CLIP1P30622 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC0.97□□□□□ -2.25
CLIP1P30622 AC091925.2-201ENST00000625059 256 ntBASIC0.97□□□□□ -2.25
CLIP1P30622 GS1-279B7.1-204ENST00000641809 378 ntBASIC0.97□□□□□ -2.25
CLIP1P30622 MTND4P31-201ENST00000425607 1343 ntBASIC0.96□□□□□ -2.26
CLIP1P30622 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 129 ms