Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 MIR548M-201ENST00000408260 86 ntBASIC5.12□□□□□ -1.59
RXRBP28702 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC5.12□□□□□ -1.59
RXRBP28702 USMG5P1-201ENST00000425964 177 ntBASIC5.12□□□□□ -1.59
RXRBP28702 USP9YP30-201ENST00000430729 455 ntBASIC5.12□□□□□ -1.59
RXRBP28702 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC5.12□□□□□ -1.59
RXRBP28702 FTH1P24-201ENST00000503502 462 ntBASIC5.12□□□□□ -1.59
RXRBP28702 AC023141.12-201ENST00000512399 199 ntBASIC5.12□□□□□ -1.59
RXRBP28702 SNORA14.1-201ENST00000516113 141 ntBASIC5.12□□□□□ -1.59
RXRBP28702 RNU6-798P-201ENST00000516912 103 ntBASIC5.12□□□□□ -1.59
RXRBP28702 AL133271.1-201ENST00000538229 291 ntBASIC5.12□□□□□ -1.59
RXRBP28702 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC5.12□□□□□ -1.59
RXRBP28702 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC5.12□□□□□ -1.59
RXRBP28702 AC078899.3-201ENST00000599065 212 ntBASIC5.12□□□□□ -1.59
RXRBP28702 RPL12P50-201ENST00000603116 116 ntBASIC5.12□□□□□ -1.59
RXRBP28702 IGHV3-29-201ENST00000604817 344 ntBASIC5.12□□□□□ -1.59
RXRBP28702 AL590099.1-201ENST00000615276 138 ntBASIC5.12□□□□□ -1.59
RXRBP28702 AC110801.1-201ENST00000623590 212 ntBASIC5.12□□□□□ -1.59
RXRBP28702 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RXRBP28702 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RXRBP28702 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
RXRBP28702 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
RXRBP28702 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
RXRBP28702 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RXRBP28702 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.12□□□□□ -1.59
RXRBP28702 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
RXRBP28702 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.12□□□□□ -1.59
RXRBP28702 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RXRBP28702 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC5.11□□□□□ -1.59
RXRBP28702 ZNF33CP-201ENST00000432492 2030 ntBASIC5.11□□□□□ -1.59
RXRBP28702 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC5.11□□□□□ -1.59
RXRBP28702 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
RXRBP28702 Y_RNA.399-201ENST00000383955 105 ntBASIC5.11□□□□□ -1.59
RXRBP28702 RNU6-128P-201ENST00000383976 107 ntBASIC5.11□□□□□ -1.59
RXRBP28702 Y_RNA.461-201ENST00000384263 103 ntBASIC5.11□□□□□ -1.59
RXRBP28702 Y_RNA.483-201ENST00000384380 101 ntBASIC5.11□□□□□ -1.59
RXRBP28702 MIR921-201ENST00000401133 56 ntBASIC5.11□□□□□ -1.59
RXRBP28702 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC5.11□□□□□ -1.59
RXRBP28702 RPLP0P7-201ENST00000416050 667 ntBASIC5.11□□□□□ -1.59
RXRBP28702 OOSP1P1-201ENST00000423265 274 ntBASIC5.11□□□□□ -1.59
RXRBP28702 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC5.11□□□□□ -1.59
RXRBP28702 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC5.11□□□□□ -1.59
RXRBP28702 AL590664.1-201ENST00000448065 339 ntBASIC5.11□□□□□ -1.59
RXRBP28702 AC087884.1-201ENST00000469738 328 ntBASIC5.11□□□□□ -1.59
RXRBP28702 GZMAP1-201ENST00000503054 631 ntBASIC5.11□□□□□ -1.59
RXRBP28702 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC5.11□□□□□ -1.59
RXRBP28702 AC108078.2-201ENST00000510750 236 ntBASIC5.11□□□□□ -1.59
RXRBP28702 RNU6-1092P-201ENST00000516955 87 ntBASIC5.11□□□□□ -1.59
RXRBP28702 RNU1-54P-201ENST00000517181 120 ntBASIC5.11□□□□□ -1.59
RXRBP28702 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.11□□□□□ -1.59
RXRBP28702 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.11□□□□□ -1.59
RXRBP28702 AC098479.1-201ENST00000609225 154 ntBASIC5.11□□□□□ -1.59
RXRBP28702 BTBD10P1-201ENST00000549824 1352 ntBASIC5.11□□□□□ -1.59
RXRBP28702 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RXRBP28702 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.11□□□□□ -1.59
RXRBP28702 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RXRBP28702 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RXRBP28702 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
RXRBP28702 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.1□□□□□ -1.59
RXRBP28702 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
RXRBP28702 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
RXRBP28702 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RXRBP28702 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
RXRBP28702 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
RXRBP28702 SNORD82-201ENST00000365530 70 ntBASIC5.1□□□□□ -1.59
RXRBP28702 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.1□□□□□ -1.59
RXRBP28702 Y_RNA.562-201ENST00000384695 113 ntBASIC5.1□□□□□ -1.59
RXRBP28702 MIR1252-201ENST00000408861 65 ntBASIC5.1□□□□□ -1.59
RXRBP28702 RNU6-55P-201ENST00000411092 107 ntBASIC5.1□□□□□ -1.59
RXRBP28702 RNA5SP107-201ENST00000411358 122 ntBASIC5.1□□□□□ -1.59
RXRBP28702 AC069218.2-201ENST00000411665 344 ntBASIC5.1□□□□□ -1.59
RXRBP28702 Z99755.1-201ENST00000414048 380 ntBASIC5.1□□□□□ -1.59
RXRBP28702 Z95327.2-201ENST00000414579 1873 ntBASIC5.1□□□□□ -1.59
RXRBP28702 SAGE2P-201ENST00000420011 2126 ntBASIC5.1□□□□□ -1.59
RXRBP28702 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC5.1□□□□□ -1.59
RXRBP28702 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC5.1□□□□□ -1.59
RXRBP28702 AL353597.2-202ENST00000434901 373 ntBASIC5.1□□□□□ -1.59
RXRBP28702 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC5.1□□□□□ -1.59
RXRBP28702 CHEK2P4-201ENST00000450340 246 ntBASIC5.1□□□□□ -1.59
RXRBP28702 AC239809.1-201ENST00000450470 217 ntBASIC5.1□□□□□ -1.59
RXRBP28702 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC5.1□□□□□ -1.59
RXRBP28702 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC5.1□□□□□ -1.59
RXRBP28702 RNU6-1023P-201ENST00000516137 106 ntBASIC5.1□□□□□ -1.59
RXRBP28702 RNU6-1332P-201ENST00000516666 104 ntBASIC5.1□□□□□ -1.59
RXRBP28702 RNU6-789P-201ENST00000517105 102 ntBASIC5.1□□□□□ -1.59
RXRBP28702 AC022695.1-201ENST00000522089 237 ntBASIC5.1□□□□□ -1.59
RXRBP28702 APAF1-207ENST00000547743 651 ntTSL 3 BASIC5.1□□□□□ -1.59
RXRBP28702 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC5.1□□□□□ -1.59
RXRBP28702 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC5.1□□□□□ -1.59
RXRBP28702 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RXRBP28702 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC5.1□□□□□ -1.59
RXRBP28702 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
RXRBP28702 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
RXRBP28702 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
RXRBP28702 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC5.09□□□□□ -1.59
RXRBP28702 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RXRBP28702 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
RXRBP28702 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC5.09□□□□□ -1.59
RXRBP28702 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RXRBP28702 RNU6-1059P-201ENST00000363752 98 ntBASIC5.09□□□□□ -1.59
RXRBP28702 RNU6-306P-201ENST00000384617 107 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms