Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.82□□□□□ -2.12
COL5A1P20908 RPS15AP38-201ENST00000413110 372 ntBASIC1.82□□□□□ -2.12
COL5A1P20908 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC1.82□□□□□ -2.12
COL5A1P20908 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.82□□□□□ -2.12
COL5A1P20908 AC092634.6-201ENST00000418558 192 ntBASIC1.82□□□□□ -2.12
COL5A1P20908 AC016907.1-201ENST00000419483 435 ntBASIC1.82□□□□□ -2.12
COL5A1P20908 AL953862.1-201ENST00000423016 168 ntBASIC1.82□□□□□ -2.12
COL5A1P20908 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC1.82□□□□□ -2.12
COL5A1P20908 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.82□□□□□ -2.12
COL5A1P20908 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC1.82□□□□□ -2.12
COL5A1P20908 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.82□□□□□ -2.12
COL5A1P20908 MTCO2P7-201ENST00000446518 666 ntBASIC1.82□□□□□ -2.12
COL5A1P20908 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC1.82□□□□□ -2.12
COL5A1P20908 AC025033.1-201ENST00000463883 194 ntBASIC1.82□□□□□ -2.12
COL5A1P20908 ARL4AP2-201ENST00000507378 601 ntBASIC1.82□□□□□ -2.12
COL5A1P20908 AC104057.1-201ENST00000515547 497 ntBASIC1.82□□□□□ -2.12
COL5A1P20908 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
COL5A1P20908 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.82□□□□□ -2.12
COL5A1P20908 AC090502.2-201ENST00000549267 280 ntBASIC1.82□□□□□ -2.12
COL5A1P20908 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC1.82□□□□□ -2.12
COL5A1P20908 SULT1C2P1-202ENST00000562418 459 ntBASIC1.82□□□□□ -2.12
COL5A1P20908 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.82□□□□□ -2.12
COL5A1P20908 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC1.82□□□□□ -2.12
COL5A1P20908 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC1.82□□□□□ -2.12
COL5A1P20908 WISP1-OT1-201ENST00000602893 642 ntBASIC1.82□□□□□ -2.12
COL5A1P20908 AL121917.1-203ENST00000605534 577 ntBASIC1.82□□□□□ -2.12
COL5A1P20908 RN7SKP299-201ENST00000606679 301 ntBASIC1.82□□□□□ -2.12
COL5A1P20908 AC012360.2-201ENST00000609349 391 ntBASIC1.82□□□□□ -2.12
COL5A1P20908 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC1.82□□□□□ -2.12
COL5A1P20908 PCMTD1P7-201ENST00000634506 357 ntBASIC1.82□□□□□ -2.12
COL5A1P20908 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.82□□□□□ -2.12
COL5A1P20908 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
COL5A1P20908 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.82□□□□□ -2.12
COL5A1P20908 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
COL5A1P20908 RNA5SP160-201ENST00000364866 120 ntBASIC1.82□□□□□ -2.12
COL5A1P20908 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC1.82□□□□□ -2.12
COL5A1P20908 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC1.82□□□□□ -2.12
COL5A1P20908 SNORD116-4-201ENST00000384733 96 ntBASIC1.82□□□□□ -2.12
COL5A1P20908 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.82□□□□□ -2.12
COL5A1P20908 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.82□□□□□ -2.12
COL5A1P20908 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.82□□□□□ -2.12
COL5A1P20908 TPMTP2-201ENST00000414372 726 ntBASIC1.82□□□□□ -2.12
COL5A1P20908 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.82□□□□□ -2.12
COL5A1P20908 CDK8P2-201ENST00000415020 547 ntBASIC1.82□□□□□ -2.12
COL5A1P20908 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.82□□□□□ -2.12
COL5A1P20908 MTCO2P34-201ENST00000421994 607 ntBASIC1.82□□□□□ -2.12
COL5A1P20908 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC1.82□□□□□ -2.12
COL5A1P20908 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.82□□□□□ -2.12
COL5A1P20908 MED14P1-201ENST00000430517 648 ntBASIC1.82□□□□□ -2.12
COL5A1P20908 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC1.82□□□□□ -2.12
COL5A1P20908 TRIM60P3Y-201ENST00000432201 673 ntBASIC1.82□□□□□ -2.12
COL5A1P20908 HMGB1P12-201ENST00000438594 598 ntBASIC1.82□□□□□ -2.12
COL5A1P20908 AC004865.1-201ENST00000442276 1003 ntBASIC1.82□□□□□ -2.12
COL5A1P20908 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC1.82□□□□□ -2.12
COL5A1P20908 RPL21P39-201ENST00000463605 483 ntBASIC1.82□□□□□ -2.12
COL5A1P20908 RNF138P1-201ENST00000502765 546 ntBASIC1.82□□□□□ -2.12
COL5A1P20908 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC1.82□□□□□ -2.12
COL5A1P20908 RNU1-40P-201ENST00000516816 164 ntBASIC1.82□□□□□ -2.12
COL5A1P20908 RNU1-97P-201ENST00000516872 164 ntBASIC1.82□□□□□ -2.12
COL5A1P20908 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.82□□□□□ -2.12
COL5A1P20908 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC1.82□□□□□ -2.12
COL5A1P20908 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC1.82□□□□□ -2.12
COL5A1P20908 AC068587.4-201ENST00000533893 186 ntBASIC1.82□□□□□ -2.12
COL5A1P20908 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC1.82□□□□□ -2.12
COL5A1P20908 RPS3AP4-201ENST00000555161 764 ntBASIC1.82□□□□□ -2.12
COL5A1P20908 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.82□□□□□ -2.12
COL5A1P20908 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC1.82□□□□□ -2.12
COL5A1P20908 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.82□□□□□ -2.12
COL5A1P20908 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.82□□□□□ -2.12
COL5A1P20908 SNORD39.3-201ENST00000584451 71 ntBASIC1.82□□□□□ -2.12
COL5A1P20908 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.82□□□□□ -2.12
COL5A1P20908 AC146944.4-201ENST00000602697 718 ntBASIC1.82□□□□□ -2.12
COL5A1P20908 AC068276.1-201ENST00000605793 379 ntBASIC1.82□□□□□ -2.12
COL5A1P20908 AL031775.1-201ENST00000607014 887 ntBASIC1.82□□□□□ -2.12
COL5A1P20908 AC122108.2-201ENST00000611946 526 ntBASIC1.82□□□□□ -2.12
COL5A1P20908 MIR6504-201ENST00000613520 61 ntBASIC1.82□□□□□ -2.12
COL5A1P20908 AC009509.4-201ENST00000619202 509 ntBASIC1.82□□□□□ -2.12
COL5A1P20908 AP000676.3-201ENST00000623299 569 ntBASIC1.82□□□□□ -2.12
COL5A1P20908 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC1.82□□□□□ -2.12
COL5A1P20908 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
COL5A1P20908 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
COL5A1P20908 Y_RNA.191-201ENST00000363972 113 ntBASIC1.81□□□□□ -2.12
COL5A1P20908 RNU6-621P-201ENST00000364752 109 ntBASIC1.81□□□□□ -2.12
COL5A1P20908 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
COL5A1P20908 RNU1-109P-201ENST00000383960 147 ntBASIC1.81□□□□□ -2.12
COL5A1P20908 RNU1-57P-201ENST00000384491 166 ntBASIC1.81□□□□□ -2.12
COL5A1P20908 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
COL5A1P20908 AC073264.1-201ENST00000411508 416 ntBASIC1.81□□□□□ -2.12
COL5A1P20908 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.81□□□□□ -2.12
COL5A1P20908 AC244098.2-201ENST00000422068 99 ntBASIC1.81□□□□□ -2.12
COL5A1P20908 AC010153.1-201ENST00000432862 727 ntBASIC1.81□□□□□ -2.12
COL5A1P20908 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC1.81□□□□□ -2.12
COL5A1P20908 KATNBL1P6-201ENST00000453433 915 ntBASIC1.81□□□□□ -2.12
COL5A1P20908 SSXP1-201ENST00000453640 473 ntBASIC1.81□□□□□ -2.12
COL5A1P20908 BX322784.1-201ENST00000455793 1077 ntBASIC1.81□□□□□ -2.12
COL5A1P20908 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.81□□□□□ -2.12
COL5A1P20908 RNU7-95P-201ENST00000459222 64 ntBASIC1.81□□□□□ -2.12
COL5A1P20908 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
COL5A1P20908 RPL30P11-201ENST00000495304 339 ntBASIC1.81□□□□□ -2.12
COL5A1P20908 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms