Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 HMGB1P18-201ENST00000438801 619 ntBASIC4.51□□□□□ -1.69
ATP2B1P20020 NDUFB1P2-201ENST00000449477 176 ntBASIC4.51□□□□□ -1.69
ATP2B1P20020 AC117503.1-201ENST00000472241 394 ntBASIC4.51□□□□□ -1.69
ATP2B1P20020 RPL30P14-201ENST00000482744 348 ntBASIC4.51□□□□□ -1.69
ATP2B1P20020 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC4.51□□□□□ -1.69
ATP2B1P20020 NDUFB4P9-201ENST00000511646 388 ntBASIC4.51□□□□□ -1.69
ATP2B1P20020 AC026402.1-201ENST00000513642 170 ntBASIC4.51□□□□□ -1.69
ATP2B1P20020 RNU1-86P-201ENST00000516108 154 ntBASIC4.51□□□□□ -1.69
ATP2B1P20020 RNU1-107P-201ENST00000516617 154 ntBASIC4.51□□□□□ -1.69
ATP2B1P20020 RNU6-256P-201ENST00000516747 97 ntBASIC4.51□□□□□ -1.69
ATP2B1P20020 SNORA25.17-201ENST00000517184 124 ntBASIC4.51□□□□□ -1.69
ATP2B1P20020 RNU6-323P-201ENST00000521915 107 ntBASIC4.51□□□□□ -1.69
ATP2B1P20020 AC091516.1-201ENST00000549191 703 ntBASIC4.51□□□□□ -1.69
ATP2B1P20020 AC011611.1-201ENST00000552179 197 ntBASIC4.51□□□□□ -1.69
ATP2B1P20020 RPS3AP23-202ENST00000574601 686 ntBASIC4.51□□□□□ -1.69
ATP2B1P20020 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.51□□□□□ -1.69
ATP2B1P20020 C8orf59P2-201ENST00000603441 271 ntBASIC4.51□□□□□ -1.69
ATP2B1P20020 AC012531.5-201ENST00000611375 151 ntBASIC4.51□□□□□ -1.69
ATP2B1P20020 RMST_4.1-201ENST00000616886 107 ntBASIC4.51□□□□□ -1.69
ATP2B1P20020 RMST_7.1-201ENST00000621935 268 ntBASIC4.51□□□□□ -1.69
ATP2B1P20020 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ATP2B1P20020 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
ATP2B1P20020 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.51□□□□□ -1.69
ATP2B1P20020 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.51□□□□□ -1.69
ATP2B1P20020 RPS4XP5-202ENST00000449995 1334 ntBASIC4.5□□□□□ -1.69
ATP2B1P20020 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
ATP2B1P20020 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
ATP2B1P20020 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
ATP2B1P20020 RNA5SP283-201ENST00000365604 119 ntBASIC4.5□□□□□ -1.69
ATP2B1P20020 Y_RNA.529-201ENST00000384586 119 ntBASIC4.5□□□□□ -1.69
ATP2B1P20020 Y_RNA.623-201ENST00000411128 95 ntBASIC4.5□□□□□ -1.69
ATP2B1P20020 VN1R36P-201ENST00000414936 291 ntBASIC4.5□□□□□ -1.69
ATP2B1P20020 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.5□□□□□ -1.69
ATP2B1P20020 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.5□□□□□ -1.69
ATP2B1P20020 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.5□□□□□ -1.69
ATP2B1P20020 AC098614.2-201ENST00000426040 255 ntBASIC4.5□□□□□ -1.69
ATP2B1P20020 AL117339.2-201ENST00000430475 180 ntBASIC4.5□□□□□ -1.69
ATP2B1P20020 AC011742.1-201ENST00000431448 434 ntBASIC4.5□□□□□ -1.69
ATP2B1P20020 AC005019.1-201ENST00000436455 431 ntBASIC4.5□□□□□ -1.69
ATP2B1P20020 HMGB1P37-201ENST00000439613 609 ntBASIC4.5□□□□□ -1.69
ATP2B1P20020 HMGB3P8-201ENST00000449709 577 ntBASIC4.5□□□□□ -1.69
ATP2B1P20020 SSXP4-201ENST00000451349 245 ntBASIC4.5□□□□□ -1.69
ATP2B1P20020 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC4.5□□□□□ -1.69
ATP2B1P20020 AL583843.1-201ENST00000456070 346 ntBASIC4.5□□□□□ -1.69
ATP2B1P20020 CEACAMP4-201ENST00000457676 421 ntBASIC4.5□□□□□ -1.69
ATP2B1P20020 RPL7P43-201ENST00000478876 753 ntBASIC4.5□□□□□ -1.69
ATP2B1P20020 RN7SL271P-201ENST00000487601 295 ntBASIC4.5□□□□□ -1.69
ATP2B1P20020 RNA5SP143-201ENST00000516936 115 ntBASIC4.5□□□□□ -1.69
ATP2B1P20020 RNU6-273P-201ENST00000516937 96 ntBASIC4.5□□□□□ -1.69
ATP2B1P20020 AC087854.1-201ENST00000519706 414 ntBASIC4.5□□□□□ -1.69
ATP2B1P20020 AC105029.1-201ENST00000520250 669 ntBASIC4.5□□□□□ -1.69
ATP2B1P20020 HIGD1AP1-201ENST00000550979 275 ntBASIC4.5□□□□□ -1.69
ATP2B1P20020 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
ATP2B1P20020 AC120057.2-201ENST00000571520 271 ntBASIC4.5□□□□□ -1.69
ATP2B1P20020 VN1R85P-201ENST00000601587 426 ntBASIC4.5□□□□□ -1.69
ATP2B1P20020 AL355598.1-201ENST00000604169 202 ntBASIC4.5□□□□□ -1.69
ATP2B1P20020 HSPE1P7-201ENST00000604681 321 ntBASIC4.5□□□□□ -1.69
ATP2B1P20020 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.5□□□□□ -1.69
ATP2B1P20020 AL391261.4-201ENST00000616012 481 ntBASIC4.5□□□□□ -1.69
ATP2B1P20020 U7.8-201ENST00000619968 63 ntBASIC4.5□□□□□ -1.69
ATP2B1P20020 MIR6500-201ENST00000622700 86 ntBASIC4.5□□□□□ -1.69
ATP2B1P20020 U6.99-201ENST00000637524 83 ntBASIC4.5□□□□□ -1.69
ATP2B1P20020 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
ATP2B1P20020 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
ATP2B1P20020 TNPO1P3-201ENST00000436471 2662 ntBASIC4.49□□□□□ -1.69
ATP2B1P20020 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.49□□□□□ -1.69
ATP2B1P20020 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
ATP2B1P20020 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.49□□□□□ -1.69
ATP2B1P20020 Y_RNA.324-201ENST00000365165 102 ntBASIC4.49□□□□□ -1.69
ATP2B1P20020 RNU6-628P-201ENST00000410675 107 ntBASIC4.49□□□□□ -1.69
ATP2B1P20020 AL592148.1-201ENST00000413568 445 ntBASIC4.49□□□□□ -1.69
ATP2B1P20020 HMGN2P30-201ENST00000423237 256 ntBASIC4.49□□□□□ -1.69
ATP2B1P20020 AL627311.1-201ENST00000431514 115 ntBASIC4.49□□□□□ -1.69
ATP2B1P20020 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.49□□□□□ -1.69
ATP2B1P20020 AL078601.1-201ENST00000444542 271 ntBASIC4.49□□□□□ -1.69
ATP2B1P20020 RPL32P34-201ENST00000486380 400 ntBASIC4.49□□□□□ -1.69
ATP2B1P20020 AC011005.2-201ENST00000487324 359 ntBASIC4.49□□□□□ -1.69
ATP2B1P20020 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.49□□□□□ -1.69
ATP2B1P20020 FGF7P4-201ENST00000509595 295 ntBASIC4.49□□□□□ -1.69
ATP2B1P20020 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.49□□□□□ -1.69
ATP2B1P20020 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.49□□□□□ -1.69
ATP2B1P20020 MIR3672-201ENST00000584290 82 ntBASIC4.49□□□□□ -1.69
ATP2B1P20020 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.49□□□□□ -1.69
ATP2B1P20020 AL645944.1-201ENST00000603857 493 ntBASIC4.49□□□□□ -1.69
ATP2B1P20020 AC069234.5-201ENST00000611056 416 ntBASIC4.49□□□□□ -1.69
ATP2B1P20020 AC104237.2-201ENST00000612456 443 ntBASIC4.49□□□□□ -1.69
ATP2B1P20020 uc_338.15-201ENST00000615470 191 ntBASIC4.49□□□□□ -1.69
ATP2B1P20020 AC009233.1-201ENST00000616477 371 ntBASIC4.49□□□□□ -1.69
ATP2B1P20020 AC068831.7-201ENST00000616954 363 ntBASIC4.49□□□□□ -1.69
ATP2B1P20020 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.49□□□□□ -1.69
ATP2B1P20020 AL133216.2-202ENST00000634512 349 ntBASIC4.49□□□□□ -1.69
ATP2B1P20020 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
ATP2B1P20020 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
ATP2B1P20020 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.48□□□□□ -1.69
ATP2B1P20020 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
ATP2B1P20020 Y_RNA.61-201ENST00000362835 102 ntBASIC4.48□□□□□ -1.69
ATP2B1P20020 Y_RNA.184-201ENST00000363884 108 ntBASIC4.48□□□□□ -1.69
ATP2B1P20020 RNU6-884P-201ENST00000363889 107 ntBASIC4.48□□□□□ -1.69
ATP2B1P20020 MIR888-201ENST00000401186 77 ntBASIC4.48□□□□□ -1.69
ATP2B1P20020 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms