Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
XRCC1P18887 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.46□□□□□ -2.02
XRCC1P18887 AC135776.4-201ENST00000624300 1904 ntBASIC2.46□□□□□ -2.02
XRCC1P18887 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.46□□□□□ -2.02
XRCC1P18887 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
XRCC1P18887 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
XRCC1P18887 RNU5F-6P-201ENST00000362979 116 ntBASIC2.45□□□□□ -2.02
XRCC1P18887 RNU6-533P-201ENST00000384144 107 ntBASIC2.45□□□□□ -2.02
XRCC1P18887 AL021407.1-201ENST00000404531 386 ntBASIC2.45□□□□□ -2.02
XRCC1P18887 RNU2-68P-201ENST00000410878 191 ntBASIC2.45□□□□□ -2.02
XRCC1P18887 RAC1P6-201ENST00000423911 575 ntBASIC2.45□□□□□ -2.02
XRCC1P18887 ISCA1P1-201ENST00000426679 387 ntBASIC2.45□□□□□ -2.02
XRCC1P18887 GPM6BP2-201ENST00000432046 144 ntBASIC2.45□□□□□ -2.02
XRCC1P18887 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.45□□□□□ -2.02
XRCC1P18887 GPM6BP1-201ENST00000446387 144 ntBASIC2.45□□□□□ -2.02
XRCC1P18887 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.45□□□□□ -2.02
XRCC1P18887 RBM43P1-201ENST00000476891 1081 ntBASIC2.45□□□□□ -2.02
XRCC1P18887 RPL31P41-201ENST00000477967 372 ntBASIC2.45□□□□□ -2.02
XRCC1P18887 SUMO2P6-201ENST00000505273 288 ntBASIC2.45□□□□□ -2.02
XRCC1P18887 RPL37P25-201ENST00000507308 276 ntBASIC2.45□□□□□ -2.02
XRCC1P18887 AC008716.1-201ENST00000511084 513 ntBASIC2.45□□□□□ -2.02
XRCC1P18887 AP006587.4-201ENST00000526053 529 ntBASIC2.45□□□□□ -2.02
XRCC1P18887 AC011979.2-201ENST00000527568 352 ntBASIC2.45□□□□□ -2.02
XRCC1P18887 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.45□□□□□ -2.02
XRCC1P18887 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.45□□□□□ -2.02
XRCC1P18887 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.45□□□□□ -2.02
XRCC1P18887 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.45□□□□□ -2.02
XRCC1P18887 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.45□□□□□ -2.02
XRCC1P18887 AC027176.1-201ENST00000560204 514 ntBASIC2.45□□□□□ -2.02
XRCC1P18887 AC009163.5-201ENST00000575421 637 ntBASIC2.45□□□□□ -2.02
XRCC1P18887 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.45□□□□□ -2.02
XRCC1P18887 MIR5194-201ENST00000582634 120 ntBASIC2.45□□□□□ -2.02
XRCC1P18887 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.45□□□□□ -2.02
XRCC1P18887 AP001981.2-201ENST00000603241 418 ntBASIC2.45□□□□□ -2.02
XRCC1P18887 DPPA3P3-201ENST00000603842 430 ntBASIC2.45□□□□□ -2.02
XRCC1P18887 AL360219.1-201ENST00000610230 366 ntBASIC2.45□□□□□ -2.02
XRCC1P18887 AC087683.2-201ENST00000611384 326 ntBASIC2.45□□□□□ -2.02
XRCC1P18887 AC009159.2-201ENST00000617603 606 ntBASIC2.45□□□□□ -2.02
XRCC1P18887 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.45□□□□□ -2.02
XRCC1P18887 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.45□□□□□ -2.02
XRCC1P18887 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
XRCC1P18887 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
XRCC1P18887 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
XRCC1P18887 RNA5SP456-201ENST00000364002 114 ntBASIC2.44□□□□□ -2.02
XRCC1P18887 MIR518C-201ENST00000384822 101 ntBASIC2.44□□□□□ -2.02
XRCC1P18887 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.44□□□□□ -2.02
XRCC1P18887 AL162578.1-201ENST00000406202 378 ntBASIC2.44□□□□□ -2.02
XRCC1P18887 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.44□□□□□ -2.02
XRCC1P18887 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.44□□□□□ -2.02
XRCC1P18887 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.44□□□□□ -2.02
XRCC1P18887 AC080125.1-201ENST00000414888 684 ntBASIC2.44□□□□□ -2.02
XRCC1P18887 AC009963.1-201ENST00000417265 157 ntBASIC2.44□□□□□ -2.02
XRCC1P18887 AL139413.1-201ENST00000421309 217 ntBASIC2.44□□□□□ -2.02
XRCC1P18887 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
XRCC1P18887 GTF2IP20-201ENST00000431663 360 ntBASIC2.44□□□□□ -2.02
XRCC1P18887 AC010153.1-201ENST00000432862 727 ntBASIC2.44□□□□□ -2.02
XRCC1P18887 CECR9-201ENST00000453421 199 ntBASIC2.44□□□□□ -2.02
XRCC1P18887 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
XRCC1P18887 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.44□□□□□ -2.02
XRCC1P18887 AC128713.1-201ENST00000471495 306 ntBASIC2.44□□□□□ -2.02
XRCC1P18887 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.44□□□□□ -2.02
XRCC1P18887 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.44□□□□□ -2.02
XRCC1P18887 RPS3AP22-201ENST00000488297 769 ntBASIC2.44□□□□□ -2.02
XRCC1P18887 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.44□□□□□ -2.02
XRCC1P18887 MRPS33P3-201ENST00000513456 322 ntBASIC2.44□□□□□ -2.02
XRCC1P18887 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.44□□□□□ -2.02
XRCC1P18887 RNU2-10P-201ENST00000516375 211 ntBASIC2.44□□□□□ -2.02
XRCC1P18887 RNU6-232P-201ENST00000517144 64 ntBASIC2.44□□□□□ -2.02
XRCC1P18887 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.44□□□□□ -2.02
XRCC1P18887 ZNF519P3-201ENST00000557158 1032 ntBASIC2.44□□□□□ -2.02
XRCC1P18887 AC012435.1-202ENST00000568772 240 ntBASIC2.44□□□□□ -2.02
XRCC1P18887 AL355877.2-201ENST00000603670 358 ntBASIC2.44□□□□□ -2.02
XRCC1P18887 AL355598.1-201ENST00000604169 202 ntBASIC2.44□□□□□ -2.02
XRCC1P18887 AC007621.1-201ENST00000604544 437 ntBASIC2.44□□□□□ -2.02
XRCC1P18887 DUSP12P1-201ENST00000612874 516 ntBASIC2.44□□□□□ -2.02
XRCC1P18887 AC025034.2-201ENST00000623264 286 ntBASIC2.44□□□□□ -2.02
XRCC1P18887 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.44□□□□□ -2.02
XRCC1P18887 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
XRCC1P18887 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.44□□□□□ -2.02
XRCC1P18887 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
XRCC1P18887 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
XRCC1P18887 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
XRCC1P18887 UBE2L2-201ENST00000254302 429 ntBASIC2.43□□□□□ -2.02
XRCC1P18887 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.43□□□□□ -2.02
XRCC1P18887 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.43□□□□□ -2.02
XRCC1P18887 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.43□□□□□ -2.02
XRCC1P18887 RNU6-817P-201ENST00000391083 104 ntBASIC2.43□□□□□ -2.02
XRCC1P18887 AL139397.2-201ENST00000404529 772 ntBASIC2.43□□□□□ -2.02
XRCC1P18887 Y_RNA.608-201ENST00000410647 95 ntBASIC2.43□□□□□ -2.02
XRCC1P18887 RPL26P27-201ENST00000414397 437 ntBASIC2.43□□□□□ -2.02
XRCC1P18887 AL365203.2-201ENST00000423444 196 ntBASIC2.43□□□□□ -2.02
XRCC1P18887 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.43□□□□□ -2.02
XRCC1P18887 AC098831.1-201ENST00000440661 216 ntBASIC2.43□□□□□ -2.02
XRCC1P18887 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC2.43□□□□□ -2.02
XRCC1P18887 NEFMP1-201ENST00000443423 1006 ntBASIC2.43□□□□□ -2.02
XRCC1P18887 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
XRCC1P18887 EEF1B2P7-201ENST00000451177 676 ntBASIC2.43□□□□□ -2.02
XRCC1P18887 FABP5P15-201ENST00000453566 214 ntBASIC2.43□□□□□ -2.02
XRCC1P18887 MTND1P12-201ENST00000455231 147 ntBASIC2.43□□□□□ -2.02
XRCC1P18887 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 146.8 ms