Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 MIR4703-201ENST00000577728 79 ntBASIC3.3□□□□□ -1.88
CTPS1P17812 BNIP3P30-201ENST00000601184 574 ntBASIC3.3□□□□□ -1.88
CTPS1P17812 AC174048.1-201ENST00000603389 144 ntBASIC3.3□□□□□ -1.88
CTPS1P17812 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CTPS1P17812 AC130324.3-201ENST00000614165 542 ntBASIC3.3□□□□□ -1.88
CTPS1P17812 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CTPS1P17812 AC002553.4-201ENST00000616896 331 ntBASIC3.3□□□□□ -1.88
CTPS1P17812 AC011155.2-201ENST00000623202 216 ntBASIC3.3□□□□□ -1.88
CTPS1P17812 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CTPS1P17812 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.3□□□□□ -1.88
CTPS1P17812 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CTPS1P17812 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CTPS1P17812 AC004520.1-201ENST00000608362 1413 ntBASIC3.29□□□□□ -1.88
CTPS1P17812 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CTPS1P17812 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CTPS1P17812 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CTPS1P17812 RNU6-288P-201ENST00000363690 104 ntBASIC3.29□□□□□ -1.88
CTPS1P17812 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CTPS1P17812 AL357075.1-201ENST00000404107 726 ntBASIC3.29□□□□□ -1.88
CTPS1P17812 RNA5SP120-201ENST00000410900 112 ntBASIC3.29□□□□□ -1.88
CTPS1P17812 RNA5SP31-201ENST00000411144 127 ntBASIC3.29□□□□□ -1.88
CTPS1P17812 AC092809.3-201ENST00000415453 231 ntBASIC3.29□□□□□ -1.88
CTPS1P17812 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.29□□□□□ -1.88
CTPS1P17812 SNRPEP10-201ENST00000420249 274 ntBASIC3.29□□□□□ -1.88
CTPS1P17812 AL109913.1-201ENST00000421173 514 ntBASIC3.29□□□□□ -1.88
CTPS1P17812 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.29□□□□□ -1.88
CTPS1P17812 AC092573.2-201ENST00000434546 243 ntBASIC3.29□□□□□ -1.88
CTPS1P17812 CBWD4P-201ENST00000445695 655 ntBASIC3.29□□□□□ -1.88
CTPS1P17812 Z75741.1-201ENST00000446793 314 ntBASIC3.29□□□□□ -1.88
CTPS1P17812 BX510359.1-201ENST00000456973 237 ntBASIC3.29□□□□□ -1.88
CTPS1P17812 RN7SL601P-201ENST00000471221 293 ntBASIC3.29□□□□□ -1.88
CTPS1P17812 AP002884.2-201ENST00000471647 395 ntBASIC3.29□□□□□ -1.88
CTPS1P17812 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.29□□□□□ -1.88
CTPS1P17812 AC092436.1-201ENST00000506450 503 ntBASIC3.29□□□□□ -1.88
CTPS1P17812 AC104806.1-201ENST00000508720 308 ntBASIC3.29□□□□□ -1.88
CTPS1P17812 TTC39CP1-201ENST00000512513 755 ntBASIC3.29□□□□□ -1.88
CTPS1P17812 RNA5SP401-201ENST00000515920 127 ntBASIC3.29□□□□□ -1.88
CTPS1P17812 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.29□□□□□ -1.88
CTPS1P17812 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CTPS1P17812 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.29□□□□□ -1.88
CTPS1P17812 RANP3-201ENST00000530970 276 ntBASIC3.29□□□□□ -1.88
CTPS1P17812 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.29□□□□□ -1.88
CTPS1P17812 HIGD1AP1-201ENST00000550979 275 ntBASIC3.29□□□□□ -1.88
CTPS1P17812 AC013553.2-201ENST00000604244 589 ntBASIC3.29□□□□□ -1.88
CTPS1P17812 AC007179.3-201ENST00000604976 235 ntBASIC3.29□□□□□ -1.88
CTPS1P17812 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
CTPS1P17812 uc_338.11-201ENST00000619132 160 ntBASIC3.29□□□□□ -1.88
CTPS1P17812 AC024940.5-201ENST00000622889 474 ntBASIC3.29□□□□□ -1.88
CTPS1P17812 MTND5P42-201ENST00000637720 498 ntBASIC3.29□□□□□ -1.88
CTPS1P17812 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
CTPS1P17812 AC004972.1-201ENST00000623934 2209 ntBASIC3.29□□□□□ -1.88
CTPS1P17812 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.29□□□□□ -1.88
CTPS1P17812 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CTPS1P17812 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CTPS1P17812 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CTPS1P17812 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
CTPS1P17812 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.28□□□□□ -1.88
CTPS1P17812 RNU6-552P-201ENST00000362869 119 ntBASIC3.28□□□□□ -1.88
CTPS1P17812 RNU6-1287P-201ENST00000362914 107 ntBASIC3.28□□□□□ -1.88
CTPS1P17812 RNU6-451P-201ENST00000362921 107 ntBASIC3.28□□□□□ -1.88
CTPS1P17812 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CTPS1P17812 RNU6-1060P-201ENST00000384664 107 ntBASIC3.28□□□□□ -1.88
CTPS1P17812 UBE2V1P2-201ENST00000397758 440 ntBASIC3.28□□□□□ -1.88
CTPS1P17812 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CTPS1P17812 AL354719.1-201ENST00000406535 843 ntBASIC3.28□□□□□ -1.88
CTPS1P17812 RNU2-29P-201ENST00000410423 189 ntBASIC3.28□□□□□ -1.88
CTPS1P17812 RNA5SP44-201ENST00000410446 133 ntBASIC3.28□□□□□ -1.88
CTPS1P17812 RNA5SP38-201ENST00000410750 119 ntBASIC3.28□□□□□ -1.88
CTPS1P17812 Z85995.1-201ENST00000415547 335 ntBASIC3.28□□□□□ -1.88
CTPS1P17812 BTF3L4P3-201ENST00000418879 476 ntBASIC3.28□□□□□ -1.88
CTPS1P17812 AL591212.2-201ENST00000433923 257 ntBASIC3.28□□□□□ -1.88
CTPS1P17812 TAAR7P-201ENST00000436141 242 ntBASIC3.28□□□□□ -1.88
CTPS1P17812 HIGD1AP11-201ENST00000438361 280 ntBASIC3.28□□□□□ -1.88
CTPS1P17812 MTND4P25-201ENST00000441039 533 ntBASIC3.28□□□□□ -1.88
CTPS1P17812 CALM1P1-201ENST00000442082 433 ntBASIC3.28□□□□□ -1.88
CTPS1P17812 WASF1P1-201ENST00000447560 1131 ntBASIC3.28□□□□□ -1.88
CTPS1P17812 DPPA3P1-201ENST00000448050 469 ntBASIC3.28□□□□□ -1.88
CTPS1P17812 RPL37P6-201ENST00000460682 294 ntBASIC3.28□□□□□ -1.88
CTPS1P17812 AC087588.1-201ENST00000462203 316 ntBASIC3.28□□□□□ -1.88
CTPS1P17812 PRDX4P1-201ENST00000507189 574 ntBASIC3.28□□□□□ -1.88
CTPS1P17812 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CTPS1P17812 AC098591.2-201ENST00000510152 315 ntBASIC3.28□□□□□ -1.88
CTPS1P17812 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.28□□□□□ -1.88
CTPS1P17812 Y_RNA.689-201ENST00000516589 107 ntBASIC3.28□□□□□ -1.88
CTPS1P17812 AP005435.4-201ENST00000529514 284 ntBASIC3.28□□□□□ -1.88
CTPS1P17812 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CTPS1P17812 ADI1P3-201ENST00000549509 470 ntBASIC3.28□□□□□ -1.88
CTPS1P17812 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.28□□□□□ -1.88
CTPS1P17812 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.28□□□□□ -1.88
CTPS1P17812 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.28□□□□□ -1.88
CTPS1P17812 NRBF2P5-201ENST00000603087 788 ntBASIC3.28□□□□□ -1.88
CTPS1P17812 AL158032.1-201ENST00000605401 106 ntBASIC3.28□□□□□ -1.88
CTPS1P17812 AC034102.8-201ENST00000615146 484 ntBASIC3.28□□□□□ -1.88
CTPS1P17812 AL359547.2-201ENST00000615810 418 ntBASIC3.28□□□□□ -1.88
CTPS1P17812 MIR7112-201ENST00000616126 65 ntBASIC3.28□□□□□ -1.88
CTPS1P17812 MIR6076-201ENST00000617521 113 ntBASIC3.28□□□□□ -1.88
CTPS1P17812 SNORD39.4-201ENST00000620099 78 ntBASIC3.28□□□□□ -1.88
CTPS1P17812 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.28□□□□□ -1.88
CTPS1P17812 MIR3662-201ENST00000637030 95 ntBASIC3.28□□□□□ -1.88
CTPS1P17812 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms