Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 MIR126-201ENST00000362291 85 ntBASIC1.15□□□□□ -2.23
CXCL1P09341 MIR150-201ENST00000385048 84 ntBASIC1.15□□□□□ -2.23
CXCL1P09341 MIR1304-201ENST00000408243 91 ntBASIC1.15□□□□□ -2.23
CXCL1P09341 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.15□□□□□ -2.23
CXCL1P09341 MTCO2P5-201ENST00000422621 426 ntBASIC1.15□□□□□ -2.23
CXCL1P09341 AL121882.1-201ENST00000422893 417 ntBASIC1.15□□□□□ -2.23
CXCL1P09341 CR848007.2-201ENST00000424918 787 ntBASIC1.15□□□□□ -2.23
CXCL1P09341 PTGES3P4-201ENST00000426243 356 ntBASIC1.15□□□□□ -2.23
CXCL1P09341 AL445669.1-201ENST00000426743 755 ntBASIC1.15□□□□□ -2.23
CXCL1P09341 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.15□□□□□ -2.23
CXCL1P09341 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.15□□□□□ -2.23
CXCL1P09341 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.15□□□□□ -2.23
CXCL1P09341 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC1.15□□□□□ -2.23
CXCL1P09341 RPL39P6-201ENST00000448289 150 ntBASIC1.15□□□□□ -2.23
CXCL1P09341 USP9YP10-201ENST00000454868 628 ntBASIC1.15□□□□□ -2.23
CXCL1P09341 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC1.15□□□□□ -2.23
CXCL1P09341 AC018868.1-201ENST00000491307 315 ntBASIC1.15□□□□□ -2.23
CXCL1P09341 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.15□□□□□ -2.23
CXCL1P09341 TPT1P8-201ENST00000510120 555 ntBASIC1.15□□□□□ -2.23
CXCL1P09341 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.15□□□□□ -2.23
CXCL1P09341 Y_RNA.675-201ENST00000516389 149 ntBASIC1.15□□□□□ -2.23
CXCL1P09341 SNORA26.10-201ENST00000516427 141 ntBASIC1.15□□□□□ -2.23
CXCL1P09341 RNU1-103P-201ENST00000516502 125 ntBASIC1.15□□□□□ -2.23
CXCL1P09341 RNA5SP290-201ENST00000517133 127 ntBASIC1.15□□□□□ -2.23
CXCL1P09341 AP005597.4-201ENST00000526762 229 ntBASIC1.15□□□□□ -2.23
CXCL1P09341 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.15□□□□□ -2.23
CXCL1P09341 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC1.15□□□□□ -2.23
CXCL1P09341 MRPS36P5-201ENST00000551909 298 ntBASIC1.15□□□□□ -2.23
CXCL1P09341 AL160236.1-201ENST00000556317 195 ntBASIC1.15□□□□□ -2.23
CXCL1P09341 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.15□□□□□ -2.23
CXCL1P09341 MIR3167-201ENST00000579623 85 ntBASIC1.15□□□□□ -2.23
CXCL1P09341 MIR4648-201ENST00000580107 72 ntBASIC1.15□□□□□ -2.23
CXCL1P09341 RN7SL622P-201ENST00000585292 275 ntBASIC1.15□□□□□ -2.23
CXCL1P09341 AP002906.1-201ENST00000603405 233 ntBASIC1.15□□□□□ -2.23
CXCL1P09341 BX248123.2-201ENST00000606318 124 ntBASIC1.15□□□□□ -2.23
CXCL1P09341 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.15□□□□□ -2.23
CXCL1P09341 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.15□□□□□ -2.23
CXCL1P09341 Z75746.1-201ENST00000440243 2080 ntBASIC1.15□□□□□ -2.23
CXCL1P09341 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
CXCL1P09341 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.14□□□□□ -2.23
CXCL1P09341 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
CXCL1P09341 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.14□□□□□ -2.23
CXCL1P09341 RNU6-637P-201ENST00000384050 107 ntBASIC1.14□□□□□ -2.23
CXCL1P09341 RNU6-253P-201ENST00000384730 105 ntBASIC1.14□□□□□ -2.23
CXCL1P09341 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
CXCL1P09341 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
CXCL1P09341 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.14□□□□□ -2.23
CXCL1P09341 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.14□□□□□ -2.23
CXCL1P09341 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC1.14□□□□□ -2.23
CXCL1P09341 CKS1BP2-201ENST00000497342 240 ntBASIC1.14□□□□□ -2.23
CXCL1P09341 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC1.14□□□□□ -2.23
CXCL1P09341 AC092436.1-201ENST00000506450 503 ntBASIC1.14□□□□□ -2.23
CXCL1P09341 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.14□□□□□ -2.23
CXCL1P09341 AC093677.1-201ENST00000514414 678 ntBASIC1.14□□□□□ -2.23
CXCL1P09341 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.14□□□□□ -2.23
CXCL1P09341 AC022861.1-201ENST00000522981 663 ntBASIC1.14□□□□□ -2.23
CXCL1P09341 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.14□□□□□ -2.23
CXCL1P09341 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.14□□□□□ -2.23
CXCL1P09341 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC1.14□□□□□ -2.23
CXCL1P09341 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC1.14□□□□□ -2.23
CXCL1P09341 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC1.14□□□□□ -2.23
CXCL1P09341 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.14□□□□□ -2.23
CXCL1P09341 AL355598.1-201ENST00000604169 202 ntBASIC1.14□□□□□ -2.23
CXCL1P09341 AL450270.1-201ENST00000606160 391 ntBASIC1.14□□□□□ -2.23
CXCL1P09341 AC092953.2-201ENST00000608000 699 ntBASIC1.14□□□□□ -2.23
CXCL1P09341 AC103710.2-201ENST00000609912 942 ntBASIC1.14□□□□□ -2.23
CXCL1P09341 AC010133.1-201ENST00000615809 842 ntBASIC1.14□□□□□ -2.23
CXCL1P09341 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.14□□□□□ -2.23
CXCL1P09341 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.14□□□□□ -2.23
CXCL1P09341 AC092192.1-201ENST00000633154 1018 ntBASIC1.14□□□□□ -2.23
CXCL1P09341 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.14□□□□□ -2.23
CXCL1P09341 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
CXCL1P09341 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
CXCL1P09341 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
CXCL1P09341 RNU6-359P-201ENST00000365466 108 ntBASIC1.13□□□□□ -2.23
CXCL1P09341 AC083799.1-201ENST00000366451 910 ntBASIC1.13□□□□□ -2.23
CXCL1P09341 RNU1-39P-201ENST00000383897 165 ntBASIC1.13□□□□□ -2.23
CXCL1P09341 Y_RNA.548-201ENST00000384656 105 ntBASIC1.13□□□□□ -2.23
CXCL1P09341 MIR517C-201ENST00000385103 95 ntBASIC1.13□□□□□ -2.23
CXCL1P09341 AC009310.1-201ENST00000414414 451 ntBASIC1.13□□□□□ -2.23
CXCL1P09341 AL353621.1-201ENST00000418219 243 ntBASIC1.13□□□□□ -2.23
CXCL1P09341 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC1.13□□□□□ -2.23
CXCL1P09341 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.13□□□□□ -2.23
CXCL1P09341 MTND1P28-201ENST00000435623 950 ntBASIC1.13□□□□□ -2.23
CXCL1P09341 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC1.13□□□□□ -2.23
CXCL1P09341 AMD1P1-201ENST00000457220 922 ntBASIC1.13□□□□□ -2.23
CXCL1P09341 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.13□□□□□ -2.23
CXCL1P09341 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC1.13□□□□□ -2.23
CXCL1P09341 SNORA44.1-201ENST00000517031 108 ntBASIC1.13□□□□□ -2.23
CXCL1P09341 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.13□□□□□ -2.23
CXCL1P09341 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC1.13□□□□□ -2.23
CXCL1P09341 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC1.13□□□□□ -2.23
CXCL1P09341 AC079598.5-201ENST00000547460 117 ntBASIC1.13□□□□□ -2.23
CXCL1P09341 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.13□□□□□ -2.23
CXCL1P09341 AC067805.1-201ENST00000559344 470 ntBASIC1.13□□□□□ -2.23
CXCL1P09341 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC1.13□□□□□ -2.23
CXCL1P09341 AC008269.2-201ENST00000561915 1105 ntBASIC1.13□□□□□ -2.23
CXCL1P09341 AC090079.2-201ENST00000575289 768 ntBASIC1.13□□□□□ -2.23
CXCL1P09341 MIR4435-1-201ENST00000582552 80 ntBASIC1.13□□□□□ -2.23
CXCL1P09341 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms