Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.43□□□□□ -2.02
HOXC4P09017 AL356575.1-201ENST00000603008 283 ntBASIC2.43□□□□□ -2.02
HOXC4P09017 AC107304.1-201ENST00000604229 296 ntBASIC2.43□□□□□ -2.02
HOXC4P09017 AC006566.1-201ENST00000608943 513 ntBASIC2.43□□□□□ -2.02
HOXC4P09017 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
HOXC4P09017 AC008498.1-201ENST00000613012 531 ntBASIC2.43□□□□□ -2.02
HOXC4P09017 AC015540.1-201ENST00000615828 501 ntBASIC2.43□□□□□ -2.02
HOXC4P09017 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.43□□□□□ -2.02
HOXC4P09017 AC002064.3-201ENST00000623448 346 ntBASIC2.43□□□□□ -2.02
HOXC4P09017 AC093591.3-201ENST00000634516 308 ntBASIC2.43□□□□□ -2.02
HOXC4P09017 AC138915.1-201ENST00000565427 1685 ntBASIC2.43□□□□□ -2.02
HOXC4P09017 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
HOXC4P09017 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
HOXC4P09017 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
HOXC4P09017 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
HOXC4P09017 AC010680.1-201ENST00000590024 3590 ntBASIC2.43□□□□□ -2.02
HOXC4P09017 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
HOXC4P09017 RNU6-1215P-201ENST00000384441 102 ntBASIC2.42□□□□□ -2.02
HOXC4P09017 RNU6-809P-201ENST00000384461 107 ntBASIC2.42□□□□□ -2.02
HOXC4P09017 RNA5SP508-201ENST00000411327 119 ntBASIC2.42□□□□□ -2.02
HOXC4P09017 RPL17P12-201ENST00000413391 526 ntBASIC2.42□□□□□ -2.02
HOXC4P09017 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.42□□□□□ -2.02
HOXC4P09017 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.42□□□□□ -2.02
HOXC4P09017 AL590383.1-201ENST00000428602 75 ntBASIC2.42□□□□□ -2.02
HOXC4P09017 AL356867.1-201ENST00000429623 299 ntBASIC2.42□□□□□ -2.02
HOXC4P09017 MYL8P-204ENST00000431574 518 ntBASIC2.42□□□□□ -2.02
HOXC4P09017 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.42□□□□□ -2.02
HOXC4P09017 FCF1P1-201ENST00000432690 571 ntBASIC2.42□□□□□ -2.02
HOXC4P09017 AC092573.2-201ENST00000434546 243 ntBASIC2.42□□□□□ -2.02
HOXC4P09017 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.42□□□□□ -2.02
HOXC4P09017 CR769767.1-201ENST00000436337 346 ntBASIC2.42□□□□□ -2.02
HOXC4P09017 RSU1P2-202ENST00000437884 485 ntBASIC2.42□□□□□ -2.02
HOXC4P09017 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.42□□□□□ -2.02
HOXC4P09017 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.42□□□□□ -2.02
HOXC4P09017 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.42□□□□□ -2.02
HOXC4P09017 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.42□□□□□ -2.02
HOXC4P09017 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.42□□□□□ -2.02
HOXC4P09017 SSXP1-201ENST00000453640 473 ntBASIC2.42□□□□□ -2.02
HOXC4P09017 MTCYBP1-201ENST00000454315 1119 ntBASIC2.42□□□□□ -2.02
HOXC4P09017 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.42□□□□□ -2.02
HOXC4P09017 RAC1P5-201ENST00000512182 576 ntBASIC2.42□□□□□ -2.02
HOXC4P09017 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.42□□□□□ -2.02
HOXC4P09017 AC116347.2-201ENST00000514912 523 ntBASIC2.42□□□□□ -2.02
HOXC4P09017 RNA5SP24-201ENST00000516478 95 ntBASIC2.42□□□□□ -2.02
HOXC4P09017 RNU6-798P-201ENST00000516912 103 ntBASIC2.42□□□□□ -2.02
HOXC4P09017 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.42□□□□□ -2.02
HOXC4P09017 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.42□□□□□ -2.02
HOXC4P09017 AC128657.1-201ENST00000549459 145 ntBASIC2.42□□□□□ -2.02
HOXC4P09017 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.42□□□□□ -2.02
HOXC4P09017 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.42□□□□□ -2.02
HOXC4P09017 AC245505.1-201ENST00000556398 224 ntBASIC2.42□□□□□ -2.02
HOXC4P09017 AC009063.1-201ENST00000563342 702 ntBASIC2.42□□□□□ -2.02
HOXC4P09017 AC020895.1-201ENST00000595362 272 ntBASIC2.42□□□□□ -2.02
HOXC4P09017 AC091805.2-201ENST00000603848 235 ntBASIC2.42□□□□□ -2.02
HOXC4P09017 SEPT7P9-203ENST00000604116 343 ntBASIC2.42□□□□□ -2.02
HOXC4P09017 AC004853.1-201ENST00000604902 698 ntBASIC2.42□□□□□ -2.02
HOXC4P09017 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.42□□□□□ -2.02
HOXC4P09017 AC108747.1-201ENST00000609508 535 ntBASIC2.42□□□□□ -2.02
HOXC4P09017 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.42□□□□□ -2.02
HOXC4P09017 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.42□□□□□ -2.02
HOXC4P09017 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.42□□□□□ -2.02
HOXC4P09017 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.42□□□□□ -2.02
HOXC4P09017 ELF2P3-201ENST00000445099 1506 ntBASIC2.42□□□□□ -2.02
HOXC4P09017 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.41□□□□□ -2.02
HOXC4P09017 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
HOXC4P09017 RNA5SP393-201ENST00000363423 117 ntBASIC2.41□□□□□ -2.02
HOXC4P09017 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.41□□□□□ -2.02
HOXC4P09017 RNU6-517P-201ENST00000384362 110 ntBASIC2.41□□□□□ -2.02
HOXC4P09017 RNU6-769P-201ENST00000384407 104 ntBASIC2.41□□□□□ -2.02
HOXC4P09017 SNORA41-201ENST00000384675 132 ntBASIC2.41□□□□□ -2.02
HOXC4P09017 SNORA40.3-201ENST00000390964 122 ntBASIC2.41□□□□□ -2.02
HOXC4P09017 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
HOXC4P09017 RPS4XP7-201ENST00000406274 780 ntBASIC2.41□□□□□ -2.02
HOXC4P09017 RPS3AP24-201ENST00000407896 734 ntBASIC2.41□□□□□ -2.02
HOXC4P09017 MIR320C1-201ENST00000408566 88 ntBASIC2.41□□□□□ -2.02
HOXC4P09017 RNU6-648P-201ENST00000410190 107 ntBASIC2.41□□□□□ -2.02
HOXC4P09017 RNU6-248P-201ENST00000410720 107 ntBASIC2.41□□□□□ -2.02
HOXC4P09017 RNU2-25P-201ENST00000411041 191 ntBASIC2.41□□□□□ -2.02
HOXC4P09017 UBE2V1P10-201ENST00000414685 269 ntBASIC2.41□□□□□ -2.02
HOXC4P09017 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
HOXC4P09017 AC010975.2-201ENST00000427781 588 ntBASIC2.41□□□□□ -2.02
HOXC4P09017 MTND1P4-201ENST00000435196 415 ntBASIC2.41□□□□□ -2.02
HOXC4P09017 MTCYBP45-201ENST00000435243 565 ntBASIC2.41□□□□□ -2.02
HOXC4P09017 AC090774.1-201ENST00000435925 246 ntBASIC2.41□□□□□ -2.02
HOXC4P09017 RPL26P6-201ENST00000440913 438 ntBASIC2.41□□□□□ -2.02
HOXC4P09017 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC2.41□□□□□ -2.02
HOXC4P09017 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.41□□□□□ -2.02
HOXC4P09017 MTCO1P42-201ENST00000457379 726 ntBASIC2.41□□□□□ -2.02
HOXC4P09017 SRRM1P2-201ENST00000464531 1192 ntBASIC2.41□□□□□ -2.02
HOXC4P09017 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.41□□□□□ -2.02
HOXC4P09017 RPL36AP51-201ENST00000487216 318 ntBASIC2.41□□□□□ -2.02
HOXC4P09017 RN7SL636P-201ENST00000497504 294 ntBASIC2.41□□□□□ -2.02
HOXC4P09017 MTND1P5-201ENST00000517906 940 ntBASIC2.41□□□□□ -2.02
HOXC4P09017 AP003392.2-201ENST00000527269 208 ntBASIC2.41□□□□□ -2.02
HOXC4P09017 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.41□□□□□ -2.02
HOXC4P09017 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.41□□□□□ -2.02
HOXC4P09017 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.41□□□□□ -2.02
HOXC4P09017 EIF1P4-201ENST00000572664 335 ntBASIC2.41□□□□□ -2.02
HOXC4P09017 MIR3913-1-201ENST00000577744 102 ntBASIC2.41□□□□□ -2.02
HOXC4P09017 MIR3945-201ENST00000581853 98 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms