Protein–RNA interactions for Protein: P05023

ATP1A1, Sodium/potassium-transporting ATPase subunit alpha-1, humanhuman

Known RBP Predictions only

Length 1,023 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1P05023 RNA5SP295-201ENST00000362655 121 ntBASIC3.14□□□□□ -1.91
ATP1A1P05023 RNU6-1097P-201ENST00000363586 107 ntBASIC3.14□□□□□ -1.91
ATP1A1P05023 RNU6-188P-201ENST00000364207 107 ntBASIC3.14□□□□□ -1.91
ATP1A1P05023 MIR558-201ENST00000384920 94 ntBASIC3.14□□□□□ -1.91
ATP1A1P05023 RNU6-876P-201ENST00000391295 104 ntBASIC3.14□□□□□ -1.91
ATP1A1P05023 RNA5SP129-201ENST00000410276 118 ntBASIC3.14□□□□□ -1.91
ATP1A1P05023 MRPL50P2-201ENST00000416821 482 ntBASIC3.14□□□□□ -1.91
ATP1A1P05023 RPL21P66-201ENST00000426566 466 ntBASIC3.14□□□□□ -1.91
ATP1A1P05023 HMGB3P12-201ENST00000438745 556 ntBASIC3.14□□□□□ -1.91
ATP1A1P05023 AC093156.1-201ENST00000440382 670 ntBASIC3.14□□□□□ -1.91
ATP1A1P05023 MTND5P20-201ENST00000448677 143 ntBASIC3.14□□□□□ -1.91
ATP1A1P05023 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.14□□□□□ -1.91
ATP1A1P05023 RNU7-59P-201ENST00000459101 61 ntBASIC3.14□□□□□ -1.91
ATP1A1P05023 RPL21P104-201ENST00000464143 478 ntBASIC3.14□□□□□ -1.91
ATP1A1P05023 RPS29P2-201ENST00000479278 136 ntBASIC3.14□□□□□ -1.91
ATP1A1P05023 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.14□□□□□ -1.91
ATP1A1P05023 AC006445.1-201ENST00000491925 405 ntBASIC3.14□□□□□ -1.91
ATP1A1P05023 RPS15AP36-201ENST00000492022 382 ntBASIC3.14□□□□□ -1.91
ATP1A1P05023 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.14□□□□□ -1.91
ATP1A1P05023 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.14□□□□□ -1.91
ATP1A1P05023 HMGB1P41-201ENST00000520234 440 ntBASIC3.14□□□□□ -1.91
ATP1A1P05023 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.14□□□□□ -1.91
ATP1A1P05023 AF235103.2-201ENST00000525753 346 ntBASIC3.14□□□□□ -1.91
ATP1A1P05023 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.14□□□□□ -1.91
ATP1A1P05023 AC128657.1-201ENST00000549459 145 ntBASIC3.14□□□□□ -1.91
ATP1A1P05023 AC024619.4-201ENST00000580924 316 ntBASIC3.14□□□□□ -1.91
ATP1A1P05023 AP001029.3-201ENST00000588063 596 ntBASIC3.14□□□□□ -1.91
ATP1A1P05023 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.14□□□□□ -1.91
ATP1A1P05023 AL162413.1-201ENST00000603198 110 ntBASIC3.14□□□□□ -1.91
ATP1A1P05023 BNIP3P9-201ENST00000603714 553 ntBASIC3.14□□□□□ -1.91
ATP1A1P05023 AL160281.1-201ENST00000605307 311 ntBASIC3.14□□□□□ -1.91
ATP1A1P05023 AL450472.3-201ENST00000615578 367 ntBASIC3.14□□□□□ -1.91
ATP1A1P05023 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.14□□□□□ -1.91
ATP1A1P05023 AC010338.1-201ENST00000621823 717 ntBASIC3.14□□□□□ -1.91
ATP1A1P05023 AC024940.5-201ENST00000622889 474 ntBASIC3.14□□□□□ -1.91
ATP1A1P05023 AC005609.4-201ENST00000625071 447 ntBASIC3.14□□□□□ -1.91
ATP1A1P05023 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.14□□□□□ -1.91
ATP1A1P05023 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.14□□□□□ -1.91
ATP1A1P05023 MTND5P7-201ENST00000413558 1798 ntBASIC3.14□□□□□ -1.91
ATP1A1P05023 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.14□□□□□ -1.91
ATP1A1P05023 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
ATP1A1P05023 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
ATP1A1P05023 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
ATP1A1P05023 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
ATP1A1P05023 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.13□□□□□ -1.91
ATP1A1P05023 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.13□□□□□ -1.91
ATP1A1P05023 RNU1-35P-201ENST00000362782 153 ntBASIC3.13□□□□□ -1.91
ATP1A1P05023 MIR591-201ENST00000385290 95 ntBASIC3.13□□□□□ -1.91
ATP1A1P05023 AL356776.1-201ENST00000406574 447 ntBASIC3.13□□□□□ -1.91
ATP1A1P05023 SNORD88.1-201ENST00000408684 91 ntBASIC3.13□□□□□ -1.91
ATP1A1P05023 RNU6-1148P-201ENST00000410992 104 ntBASIC3.13□□□□□ -1.91
ATP1A1P05023 RNU6-516P-201ENST00000411381 104 ntBASIC3.13□□□□□ -1.91
ATP1A1P05023 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.13□□□□□ -1.91
ATP1A1P05023 AC114491.1-201ENST00000416095 246 ntBASIC3.13□□□□□ -1.91
ATP1A1P05023 MTCYBP8-201ENST00000422855 651 ntBASIC3.13□□□□□ -1.91
ATP1A1P05023 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.13□□□□□ -1.91
ATP1A1P05023 RPS20P5-201ENST00000434808 360 ntBASIC3.13□□□□□ -1.91
ATP1A1P05023 MTND4P25-201ENST00000441039 533 ntBASIC3.13□□□□□ -1.91
ATP1A1P05023 USP9YP8-201ENST00000441913 500 ntBASIC3.13□□□□□ -1.91
ATP1A1P05023 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.13□□□□□ -1.91
ATP1A1P05023 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
ATP1A1P05023 AC140076.1-201ENST00000449897 361 ntBASIC3.13□□□□□ -1.91
ATP1A1P05023 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.13□□□□□ -1.91
ATP1A1P05023 MTND1P9-201ENST00000453775 944 ntBASIC3.13□□□□□ -1.91
ATP1A1P05023 AC108059.3-201ENST00000456388 214 ntBASIC3.13□□□□□ -1.91
ATP1A1P05023 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.13□□□□□ -1.91
ATP1A1P05023 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.13□□□□□ -1.91
ATP1A1P05023 HMGN1P12-201ENST00000499125 195 ntBASIC3.13□□□□□ -1.91
ATP1A1P05023 AC008628.2-201ENST00000502605 298 ntBASIC3.13□□□□□ -1.91
ATP1A1P05023 AC018710.1-201ENST00000506509 158 ntBASIC3.13□□□□□ -1.91
ATP1A1P05023 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.13□□□□□ -1.91
ATP1A1P05023 RNU6-1073P-201ENST00000517182 106 ntBASIC3.13□□□□□ -1.91
ATP1A1P05023 SUB1P1-201ENST00000524415 382 ntBASIC3.13□□□□□ -1.91
ATP1A1P05023 AP005435.4-201ENST00000529514 284 ntBASIC3.13□□□□□ -1.91
ATP1A1P05023 AC123904.3-201ENST00000547218 814 ntBASIC3.13□□□□□ -1.91
ATP1A1P05023 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.13□□□□□ -1.91
ATP1A1P05023 AL031176.1-201ENST00000604554 466 ntBASIC3.13□□□□□ -1.91
ATP1A1P05023 AC004908.2-201ENST00000609090 574 ntBASIC3.13□□□□□ -1.91
ATP1A1P05023 AC093838.1-201ENST00000613014 469 ntBASIC3.13□□□□□ -1.91
ATP1A1P05023 AC104260.1-201ENST00000616660 539 ntBASIC3.13□□□□□ -1.91
ATP1A1P05023 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.13□□□□□ -1.91
ATP1A1P05023 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.13□□□□□ -1.91
ATP1A1P05023 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
ATP1A1P05023 AP001350.1-201ENST00000601906 1524 ntBASIC3.13□□□□□ -1.91
ATP1A1P05023 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
ATP1A1P05023 AC005183.1-201ENST00000603687 1979 ntBASIC3.12□□□□□ -1.91
ATP1A1P05023 AC009487.2-201ENST00000420969 6821 ntBASIC3.12□□□□□ -1.91
ATP1A1P05023 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
ATP1A1P05023 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
ATP1A1P05023 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
ATP1A1P05023 Y_RNA.160-201ENST00000363677 92 ntBASIC3.12□□□□□ -1.91
ATP1A1P05023 RNU5E-6P-201ENST00000365574 115 ntBASIC3.12□□□□□ -1.91
ATP1A1P05023 RNU6-877P-201ENST00000383868 107 ntBASIC3.12□□□□□ -1.91
ATP1A1P05023 RNU6-637P-201ENST00000384050 107 ntBASIC3.12□□□□□ -1.91
ATP1A1P05023 Y_RNA.481-201ENST00000384373 102 ntBASIC3.12□□□□□ -1.91
ATP1A1P05023 AL354719.1-201ENST00000406535 843 ntBASIC3.12□□□□□ -1.91
ATP1A1P05023 ZNF90P2-204ENST00000419323 1075 ntBASIC3.12□□□□□ -1.91
ATP1A1P05023 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
ATP1A1P05023 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.12□□□□□ -1.91
ATP1A1P05023 AC090774.1-201ENST00000435925 246 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms