Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 AC107081.1-201ENST00000414975 361 ntBASIC1.88□□□□□ -2.11
MT-ND4P03905 AC096649.2-201ENST00000416186 393 ntBASIC1.88□□□□□ -2.11
MT-ND4P03905 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC1.88□□□□□ -2.11
MT-ND4P03905 VPS26BP1-201ENST00000417155 755 ntBASIC1.88□□□□□ -2.11
MT-ND4P03905 AC106883.1-201ENST00000418805 562 ntBASIC1.88□□□□□ -2.11
MT-ND4P03905 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC1.88□□□□□ -2.11
MT-ND4P03905 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.88□□□□□ -2.11
MT-ND4P03905 HMGN2P38-201ENST00000423806 265 ntBASIC1.88□□□□□ -2.11
MT-ND4P03905 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1.88□□□□□ -2.11
MT-ND4P03905 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
MT-ND4P03905 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC1.88□□□□□ -2.11
MT-ND4P03905 LARP1BP3-201ENST00000437229 869 ntBASIC1.88□□□□□ -2.11
MT-ND4P03905 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.88□□□□□ -2.11
MT-ND4P03905 AC128713.1-201ENST00000471495 306 ntBASIC1.88□□□□□ -2.11
MT-ND4P03905 AC022493.1-201ENST00000492984 337 ntBASIC1.88□□□□□ -2.11
MT-ND4P03905 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.88□□□□□ -2.11
MT-ND4P03905 HSPE1P23-201ENST00000509838 286 ntBASIC1.88□□□□□ -2.11
MT-ND4P03905 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC1.88□□□□□ -2.11
MT-ND4P03905 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.88□□□□□ -2.11
MT-ND4P03905 DUXAP1-201ENST00000556632 463 ntBASIC1.88□□□□□ -2.11
MT-ND4P03905 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.88□□□□□ -2.11
MT-ND4P03905 AC002984.1-201ENST00000591692 448 ntBASIC1.88□□□□□ -2.11
MT-ND4P03905 AC005261.5-201ENST00000596280 355 ntBASIC1.88□□□□□ -2.11
MT-ND4P03905 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.88□□□□□ -2.11
MT-ND4P03905 AL355472.4-201ENST00000610233 626 ntBASIC1.88□□□□□ -2.11
MT-ND4P03905 DLEU1_1.1-201ENST00000618107 190 ntBASIC1.88□□□□□ -2.11
MT-ND4P03905 AC079416.3-201ENST00000624479 549 ntBASIC1.88□□□□□ -2.11
MT-ND4P03905 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC1.88□□□□□ -2.11
MT-ND4P03905 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
MT-ND4P03905 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
MT-ND4P03905 AC004520.1-201ENST00000608362 1413 ntBASIC1.88□□□□□ -2.11
MT-ND4P03905 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.88□□□□□ -2.11
MT-ND4P03905 ZNF736P9Y-201ENST00000439586 1345 ntBASIC1.88□□□□□ -2.11
MT-ND4P03905 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.88□□□□□ -2.11
MT-ND4P03905 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
MT-ND4P03905 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC1.87□□□□□ -2.11
MT-ND4P03905 UBE2L2-201ENST00000254302 429 ntBASIC1.87□□□□□ -2.11
MT-ND4P03905 U3.12-201ENST00000364498 214 ntBASIC1.87□□□□□ -2.11
MT-ND4P03905 RNA5SP88-201ENST00000365560 109 ntBASIC1.87□□□□□ -2.11
MT-ND4P03905 AL445529.1-201ENST00000398713 389 ntBASIC1.87□□□□□ -2.11
MT-ND4P03905 RNU2-68P-201ENST00000410878 191 ntBASIC1.87□□□□□ -2.11
MT-ND4P03905 RPL17P12-201ENST00000413391 526 ntBASIC1.87□□□□□ -2.11
MT-ND4P03905 RPL26P27-201ENST00000414397 437 ntBASIC1.87□□□□□ -2.11
MT-ND4P03905 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.87□□□□□ -2.11
MT-ND4P03905 MTCO2P21-201ENST00000419780 677 ntBASIC1.87□□□□□ -2.11
MT-ND4P03905 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.87□□□□□ -2.11
MT-ND4P03905 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.87□□□□□ -2.11
MT-ND4P03905 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC1.87□□□□□ -2.11
MT-ND4P03905 HMGB1P9-201ENST00000429856 646 ntBASIC1.87□□□□□ -2.11
MT-ND4P03905 AC236972.1-201ENST00000433225 199 ntBASIC1.87□□□□□ -2.11
MT-ND4P03905 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC1.87□□□□□ -2.11
MT-ND4P03905 RPL7P36-201ENST00000444633 681 ntBASIC1.87□□□□□ -2.11
MT-ND4P03905 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.87□□□□□ -2.11
MT-ND4P03905 FABP5P15-201ENST00000453566 214 ntBASIC1.87□□□□□ -2.11
MT-ND4P03905 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC1.87□□□□□ -2.11
MT-ND4P03905 DYNLL1P5-201ENST00000467158 270 ntBASIC1.87□□□□□ -2.11
MT-ND4P03905 TRBV1-201ENST00000476502 284 ntBASIC1.87□□□□□ -2.11
MT-ND4P03905 RPL23AP49-201ENST00000492925 468 ntBASIC1.87□□□□□ -2.11
MT-ND4P03905 RPF2P2-201ENST00000504693 896 ntBASIC1.87□□□□□ -2.11
MT-ND4P03905 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.87□□□□□ -2.11
MT-ND4P03905 MTCYBP20-201ENST00000524239 1129 ntBASIC1.87□□□□□ -2.11
MT-ND4P03905 AP001646.1-201ENST00000527936 915 ntBASIC1.87□□□□□ -2.11
MT-ND4P03905 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.87□□□□□ -2.11
MT-ND4P03905 AP000907.2-201ENST00000530827 353 ntBASIC1.87□□□□□ -2.11
MT-ND4P03905 AP004247.1-201ENST00000531556 1289 ntBASIC1.87□□□□□ -2.11
MT-ND4P03905 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.87□□□□□ -2.11
MT-ND4P03905 CYCSP26-201ENST00000534107 320 ntBASIC1.87□□□□□ -2.11
MT-ND4P03905 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC1.87□□□□□ -2.11
MT-ND4P03905 AL138976.2-201ENST00000563989 694 ntBASIC1.87□□□□□ -2.11
MT-ND4P03905 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.87□□□□□ -2.11
MT-ND4P03905 AC024619.4-201ENST00000580924 316 ntBASIC1.87□□□□□ -2.11
MT-ND4P03905 MIR4448-201ENST00000584360 86 ntBASIC1.87□□□□□ -2.11
MT-ND4P03905 MIR5002-201ENST00000584713 97 ntBASIC1.87□□□□□ -2.11
MT-ND4P03905 APOOP1-201ENST00000604695 592 ntBASIC1.87□□□□□ -2.11
MT-ND4P03905 AC025588.2-201ENST00000604851 466 ntBASIC1.87□□□□□ -2.11
MT-ND4P03905 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.87□□□□□ -2.11
MT-ND4P03905 AL162373.1-201ENST00000620433 407 ntBASIC1.87□□□□□ -2.11
MT-ND4P03905 AC007998.5-201ENST00000622938 237 ntBASIC1.87□□□□□ -2.11
MT-ND4P03905 AC010329.5-201ENST00000623497 2174 ntBASIC1.87□□□□□ -2.11
MT-ND4P03905 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.87□□□□□ -2.11
MT-ND4P03905 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.87□□□□□ -2.11
MT-ND4P03905 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
MT-ND4P03905 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.86□□□□□ -2.11
MT-ND4P03905 HSPE1P11-201ENST00000339579 310 ntBASIC1.86□□□□□ -2.11
MT-ND4P03905 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.86□□□□□ -2.11
MT-ND4P03905 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
MT-ND4P03905 AC078974.1-201ENST00000411597 223 ntBASIC1.86□□□□□ -2.11
MT-ND4P03905 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.86□□□□□ -2.11
MT-ND4P03905 ISCA1P1-201ENST00000426679 387 ntBASIC1.86□□□□□ -2.11
MT-ND4P03905 GPM6BP2-201ENST00000432046 144 ntBASIC1.86□□□□□ -2.11
MT-ND4P03905 RPL36AP53-201ENST00000432891 316 ntBASIC1.86□□□□□ -2.11
MT-ND4P03905 MTND1P32-201ENST00000433043 938 ntBASIC1.86□□□□□ -2.11
MT-ND4P03905 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC1.86□□□□□ -2.11
MT-ND4P03905 SDR42E1P3-201ENST00000438345 502 ntBASIC1.86□□□□□ -2.11
MT-ND4P03905 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.86□□□□□ -2.11
MT-ND4P03905 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.86□□□□□ -2.11
MT-ND4P03905 AL591719.1-201ENST00000444669 744 ntBASIC1.86□□□□□ -2.11
MT-ND4P03905 GPM6BP1-201ENST00000446387 144 ntBASIC1.86□□□□□ -2.11
MT-ND4P03905 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.86□□□□□ -2.11
MT-ND4P03905 EEF1B2P7-201ENST00000451177 676 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms