Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 SNHG22-203ENST00000617833 660 ntBASIC2.64□□□□□ -1.99
MT-ND1P03886 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.64□□□□□ -1.99
MT-ND1P03886 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
MT-ND1P03886 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
MT-ND1P03886 AL355596.1-201ENST00000565399 3996 ntBASIC2.63□□□□□ -1.99
MT-ND1P03886 MIR627-201ENST00000384979 97 ntBASIC2.63□□□□□ -1.99
MT-ND1P03886 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
MT-ND1P03886 RPL21P75-201ENST00000396599 483 ntBASIC2.63□□□□□ -1.99
MT-ND1P03886 AL512633.1-201ENST00000399931 655 ntBASIC2.63□□□□□ -1.99
MT-ND1P03886 RPL21P28-201ENST00000401418 483 ntBASIC2.63□□□□□ -1.99
MT-ND1P03886 AL592114.1-201ENST00000403842 483 ntBASIC2.63□□□□□ -1.99
MT-ND1P03886 AL139397.2-201ENST00000404529 772 ntBASIC2.63□□□□□ -1.99
MT-ND1P03886 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.63□□□□□ -1.99
MT-ND1P03886 RNU2-62P-201ENST00000410868 191 ntBASIC2.63□□□□□ -1.99
MT-ND1P03886 RNA5SP492-201ENST00000411330 114 ntBASIC2.63□□□□□ -1.99
MT-ND1P03886 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC2.63□□□□□ -1.99
MT-ND1P03886 FCF1P1-201ENST00000432690 571 ntBASIC2.63□□□□□ -1.99
MT-ND1P03886 MTCO3P5-201ENST00000433620 714 ntBASIC2.63□□□□□ -1.99
MT-ND1P03886 CYCSP32-201ENST00000440548 321 ntBASIC2.63□□□□□ -1.99
MT-ND1P03886 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.63□□□□□ -1.99
MT-ND1P03886 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.63□□□□□ -1.99
MT-ND1P03886 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.63□□□□□ -1.99
MT-ND1P03886 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.63□□□□□ -1.99
MT-ND1P03886 RPL21P39-201ENST00000463605 483 ntBASIC2.63□□□□□ -1.99
MT-ND1P03886 MTCO2P29-201ENST00000465212 189 ntBASIC2.63□□□□□ -1.99
MT-ND1P03886 AC008571.1-201ENST00000467232 300 ntBASIC2.63□□□□□ -1.99
MT-ND1P03886 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.63□□□□□ -1.99
MT-ND1P03886 RPL21P93-201ENST00000480465 489 ntBASIC2.63□□□□□ -1.99
MT-ND1P03886 AC087190.1-201ENST00000484462 480 ntBASIC2.63□□□□□ -1.99
MT-ND1P03886 AC093591.1-201ENST00000491435 481 ntBASIC2.63□□□□□ -1.99
MT-ND1P03886 RPL21P129-201ENST00000491732 478 ntBASIC2.63□□□□□ -1.99
MT-ND1P03886 RPL21P16-201ENST00000495531 483 ntBASIC2.63□□□□□ -1.99
MT-ND1P03886 AC105252.1-201ENST00000503089 286 ntBASIC2.63□□□□□ -1.99
MT-ND1P03886 AC114786.4-201ENST00000508771 728 ntBASIC2.63□□□□□ -1.99
MT-ND1P03886 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.63□□□□□ -1.99
MT-ND1P03886 AC113155.1-201ENST00000511141 769 ntBASIC2.63□□□□□ -1.99
MT-ND1P03886 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.63□□□□□ -1.99
MT-ND1P03886 RNU6-390P-201ENST00000516259 103 ntBASIC2.63□□□□□ -1.99
MT-ND1P03886 SNORA9.3-201ENST00000516383 129 ntBASIC2.63□□□□□ -1.99
MT-ND1P03886 SCARNA13-201ENST00000516672 275 ntBASIC2.63□□□□□ -1.99
MT-ND1P03886 Vault.3-201ENST00000516676 95 ntBASIC2.63□□□□□ -1.99
MT-ND1P03886 AC009812.2-201ENST00000517657 457 ntBASIC2.63□□□□□ -1.99
MT-ND1P03886 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
MT-ND1P03886 HSPE1P20-201ENST00000538133 289 ntBASIC2.63□□□□□ -1.99
MT-ND1P03886 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
MT-ND1P03886 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
MT-ND1P03886 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.63□□□□□ -1.99
MT-ND1P03886 AL391261.3-201ENST00000557194 520 ntBASIC2.63□□□□□ -1.99
MT-ND1P03886 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.63□□□□□ -1.99
MT-ND1P03886 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
MT-ND1P03886 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.63□□□□□ -1.99
MT-ND1P03886 BNIP3P33-201ENST00000598912 569 ntBASIC2.63□□□□□ -1.99
MT-ND1P03886 AL355877.2-201ENST00000603670 358 ntBASIC2.63□□□□□ -1.99
MT-ND1P03886 DPPA3P3-201ENST00000603842 430 ntBASIC2.63□□□□□ -1.99
MT-ND1P03886 AL136363.2-201ENST00000604173 851 ntBASIC2.63□□□□□ -1.99
MT-ND1P03886 AL022154.1-201ENST00000604698 785 ntBASIC2.63□□□□□ -1.99
MT-ND1P03886 YPEL5P2-201ENST00000605553 359 ntBASIC2.63□□□□□ -1.99
MT-ND1P03886 AC005332.10-201ENST00000612725 619 ntBASIC2.63□□□□□ -1.99
MT-ND1P03886 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.63□□□□□ -1.99
MT-ND1P03886 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
MT-ND1P03886 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.62□□□□□ -1.99
MT-ND1P03886 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
MT-ND1P03886 MTND5P26-201ENST00000426018 1752 ntBASIC2.62□□□□□ -1.99
MT-ND1P03886 SNORD56.2-201ENST00000363242 71 ntBASIC2.62□□□□□ -1.99
MT-ND1P03886 RNU6-1284P-201ENST00000363701 100 ntBASIC2.62□□□□□ -1.99
MT-ND1P03886 RNU5E-6P-201ENST00000365574 115 ntBASIC2.62□□□□□ -1.99
MT-ND1P03886 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.62□□□□□ -1.99
MT-ND1P03886 SNORA20.2-201ENST00000383922 131 ntBASIC2.62□□□□□ -1.99
MT-ND1P03886 Y_RNA.582-201ENST00000391023 95 ntBASIC2.62□□□□□ -1.99
MT-ND1P03886 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.62□□□□□ -1.99
MT-ND1P03886 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.62□□□□□ -1.99
MT-ND1P03886 ELOCP4-201ENST00000420090 333 ntBASIC2.62□□□□□ -1.99
MT-ND1P03886 AC098614.2-201ENST00000426040 255 ntBASIC2.62□□□□□ -1.99
MT-ND1P03886 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.62□□□□□ -1.99
MT-ND1P03886 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.62□□□□□ -1.99
MT-ND1P03886 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.62□□□□□ -1.99
MT-ND1P03886 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.62□□□□□ -1.99
MT-ND1P03886 AC009296.1-201ENST00000443146 155 ntBASIC2.62□□□□□ -1.99
MT-ND1P03886 AL590639.1-201ENST00000456484 337 ntBASIC2.62□□□□□ -1.99
MT-ND1P03886 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.62□□□□□ -1.99
MT-ND1P03886 AC091133.4-201ENST00000511142 308 ntBASIC2.62□□□□□ -1.99
MT-ND1P03886 AC091826.1-201ENST00000514065 313 ntBASIC2.62□□□□□ -1.99
MT-ND1P03886 SCARNA24.1-201ENST00000516465 137 ntBASIC2.62□□□□□ -1.99
MT-ND1P03886 AC090572.1-201ENST00000519251 160 ntBASIC2.62□□□□□ -1.99
MT-ND1P03886 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.62□□□□□ -1.99
MT-ND1P03886 HPRT1P3-201ENST00000539521 576 ntBASIC2.62□□□□□ -1.99
MT-ND1P03886 AC025281.1-201ENST00000567026 265 ntBASIC2.62□□□□□ -1.99
MT-ND1P03886 NRBF2P1-201ENST00000587407 859 ntBASIC2.62□□□□□ -1.99
MT-ND1P03886 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.62□□□□□ -1.99
MT-ND1P03886 AC136601.2-201ENST00000604356 474 ntBASIC2.62□□□□□ -1.99
MT-ND1P03886 FTX_3.1-201ENST00000610451 147 ntBASIC2.62□□□□□ -1.99
MT-ND1P03886 AC084782.3-201ENST00000612282 578 ntBASIC2.62□□□□□ -1.99
MT-ND1P03886 AC136475.10-201ENST00000620253 385 ntBASIC2.62□□□□□ -1.99
MT-ND1P03886 AC098679.4-201ENST00000624241 654 ntBASIC2.62□□□□□ -1.99
MT-ND1P03886 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
MT-ND1P03886 FTLP6-201ENST00000355274 422 ntBASIC2.61□□□□□ -1.99
MT-ND1P03886 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
MT-ND1P03886 Y_RNA.22-201ENST00000362492 102 ntBASIC2.61□□□□□ -1.99
MT-ND1P03886 RNU6-181P-201ENST00000363225 107 ntBASIC2.61□□□□□ -1.99
MT-ND1P03886 RNU6-188P-201ENST00000364207 107 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms