Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AL157687.1-201ENST00000554853 619 ntBASIC2.96□□□□□ -1.94
COL2A1P02458 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.96□□□□□ -1.94
COL2A1P02458 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.96□□□□□ -1.94
COL2A1P02458 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.96□□□□□ -1.94
COL2A1P02458 AC011712.1-201ENST00000588959 234 ntBASIC2.96□□□□□ -1.94
COL2A1P02458 AC005261.5-201ENST00000596280 355 ntBASIC2.96□□□□□ -1.94
COL2A1P02458 MIR98-201ENST00000606724 119 ntBASIC2.96□□□□□ -1.94
COL2A1P02458 AL133173.2-201ENST00000614270 90 ntBASIC2.96□□□□□ -1.94
COL2A1P02458 AC018926.3-201ENST00000618841 406 ntBASIC2.96□□□□□ -1.94
COL2A1P02458 YWHAEP7-203ENST00000622054 312 ntBASIC2.96□□□□□ -1.94
COL2A1P02458 AC100810.6-201ENST00000638068 285 ntBASIC2.96□□□□□ -1.94
COL2A1P02458 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
COL2A1P02458 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC2.96□□□□□ -1.94
COL2A1P02458 ADAM3A-203ENST00000461344 2157 ntBASIC2.95□□□□□ -1.94
COL2A1P02458 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.95□□□□□ -1.94
COL2A1P02458 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC2.95□□□□□ -1.94
COL2A1P02458 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.95□□□□□ -1.94
COL2A1P02458 SNORA51.4-201ENST00000364993 124 ntBASIC2.95□□□□□ -1.94
COL2A1P02458 SNORA32.2-201ENST00000384049 122 ntBASIC2.95□□□□□ -1.94
COL2A1P02458 RNU6-76P-201ENST00000384060 104 ntBASIC2.95□□□□□ -1.94
COL2A1P02458 EIF5P1-201ENST00000400019 1231 ntBASIC2.95□□□□□ -1.94
COL2A1P02458 RNU2-28P-201ENST00000410457 189 ntBASIC2.95□□□□□ -1.94
COL2A1P02458 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.95□□□□□ -1.94
COL2A1P02458 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.95□□□□□ -1.94
COL2A1P02458 AL354751.2-201ENST00000415471 210 ntBASIC2.95□□□□□ -1.94
COL2A1P02458 PDCL2P1-201ENST00000419302 352 ntBASIC2.95□□□□□ -1.94
COL2A1P02458 AC005534.2-201ENST00000431047 433 ntBASIC2.95□□□□□ -1.94
COL2A1P02458 GPM6BP2-201ENST00000432046 144 ntBASIC2.95□□□□□ -1.94
COL2A1P02458 TAAR7P-201ENST00000436141 242 ntBASIC2.95□□□□□ -1.94
COL2A1P02458 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC2.95□□□□□ -1.94
COL2A1P02458 BNIP3P2-201ENST00000441221 577 ntBASIC2.95□□□□□ -1.94
COL2A1P02458 GPM6BP1-201ENST00000446387 144 ntBASIC2.95□□□□□ -1.94
COL2A1P02458 MTCO1P27-201ENST00000448269 226 ntBASIC2.95□□□□□ -1.94
COL2A1P02458 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC2.95□□□□□ -1.94
COL2A1P02458 TRGVB-201ENST00000453257 471 ntBASIC2.95□□□□□ -1.94
COL2A1P02458 RNU6-420P-201ENST00000458780 107 ntBASIC2.95□□□□□ -1.94
COL2A1P02458 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.95□□□□□ -1.94
COL2A1P02458 MTND5P5-201ENST00000503764 376 ntBASIC2.95□□□□□ -1.94
COL2A1P02458 AC092436.1-201ENST00000506450 503 ntBASIC2.95□□□□□ -1.94
COL2A1P02458 POU5F1P7-201ENST00000508759 541 ntBASIC2.95□□□□□ -1.94
COL2A1P02458 RNA5SP401-201ENST00000515920 127 ntBASIC2.95□□□□□ -1.94
COL2A1P02458 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC2.95□□□□□ -1.94
COL2A1P02458 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC2.95□□□□□ -1.94
COL2A1P02458 AC093519.1-201ENST00000566109 298 ntBASIC2.95□□□□□ -1.94
COL2A1P02458 AC005498.1-201ENST00000592125 465 ntBASIC2.95□□□□□ -1.94
COL2A1P02458 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC2.95□□□□□ -1.94
COL2A1P02458 LLPHP1-201ENST00000603571 367 ntBASIC2.95□□□□□ -1.94
COL2A1P02458 RMST_3.1-201ENST00000611651 109 ntBASIC2.95□□□□□ -1.94
COL2A1P02458 AC243773.3-201ENST00000613270 256 ntBASIC2.95□□□□□ -1.94
COL2A1P02458 AC009233.1-201ENST00000616477 371 ntBASIC2.95□□□□□ -1.94
COL2A1P02458 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC2.95□□□□□ -1.94
COL2A1P02458 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.95□□□□□ -1.94
COL2A1P02458 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.95□□□□□ -1.94
COL2A1P02458 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
COL2A1P02458 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
COL2A1P02458 FARSBP1-201ENST00000435808 1778 ntBASIC2.94□□□□□ -1.94
COL2A1P02458 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.94□□□□□ -1.94
COL2A1P02458 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
COL2A1P02458 FRG1BP-201ENST00000278882 761 ntBASIC2.94□□□□□ -1.94
COL2A1P02458 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
COL2A1P02458 RNA5SP456-201ENST00000364002 114 ntBASIC2.94□□□□□ -1.94
COL2A1P02458 Y_RNA.326-201ENST00000365176 113 ntBASIC2.94□□□□□ -1.94
COL2A1P02458 RNU6-317P-201ENST00000384031 107 ntBASIC2.94□□□□□ -1.94
COL2A1P02458 SNORA75.4-201ENST00000391278 119 ntBASIC2.94□□□□□ -1.94
COL2A1P02458 AL356432.1-201ENST00000405809 419 ntBASIC2.94□□□□□ -1.94
COL2A1P02458 RNA5SP129-201ENST00000410276 118 ntBASIC2.94□□□□□ -1.94
COL2A1P02458 RNU6-1068P-201ENST00000410958 103 ntBASIC2.94□□□□□ -1.94
COL2A1P02458 OR9R1P-201ENST00000412200 877 ntBASIC2.94□□□□□ -1.94
COL2A1P02458 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
COL2A1P02458 AC022022.1-201ENST00000430304 178 ntBASIC2.94□□□□□ -1.94
COL2A1P02458 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.94□□□□□ -1.94
COL2A1P02458 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.94□□□□□ -1.94
COL2A1P02458 AC097493.1-201ENST00000463958 372 ntBASIC2.94□□□□□ -1.94
COL2A1P02458 RN7SL283P-201ENST00000489055 303 ntBASIC2.94□□□□□ -1.94
COL2A1P02458 RPL39P36-201ENST00000490784 156 ntBASIC2.94□□□□□ -1.94
COL2A1P02458 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.94□□□□□ -1.94
COL2A1P02458 AC068305.1-201ENST00000497406 726 ntBASIC2.94□□□□□ -1.94
COL2A1P02458 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.94□□□□□ -1.94
COL2A1P02458 RNU6-327P-201ENST00000516270 127 ntBASIC2.94□□□□□ -1.94
COL2A1P02458 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.94□□□□□ -1.94
COL2A1P02458 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.94□□□□□ -1.94
COL2A1P02458 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC2.94□□□□□ -1.94
COL2A1P02458 AC128657.1-201ENST00000549459 145 ntBASIC2.94□□□□□ -1.94
COL2A1P02458 CBX3P5-201ENST00000552017 521 ntBASIC2.94□□□□□ -1.94
COL2A1P02458 AC068446.3-201ENST00000555285 382 ntBASIC2.94□□□□□ -1.94
COL2A1P02458 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
COL2A1P02458 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
COL2A1P02458 AC243960.4-201ENST00000600532 288 ntBASIC2.94□□□□□ -1.94
COL2A1P02458 AC012119.1-201ENST00000603184 222 ntBASIC2.94□□□□□ -1.94
COL2A1P02458 AL360085.1-201ENST00000604713 532 ntBASIC2.94□□□□□ -1.94
COL2A1P02458 AC007363.1-201ENST00000604736 620 ntBASIC2.94□□□□□ -1.94
COL2A1P02458 Z84480.1-201ENST00000605131 311 ntBASIC2.94□□□□□ -1.94
COL2A1P02458 HSPE1P14-201ENST00000605812 302 ntBASIC2.94□□□□□ -1.94
COL2A1P02458 AC107871.2-201ENST00000612894 502 ntBASIC2.94□□□□□ -1.94
COL2A1P02458 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.94□□□□□ -1.94
COL2A1P02458 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.94□□□□□ -1.94
COL2A1P02458 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.94□□□□□ -1.94
COL2A1P02458 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.94□□□□□ -1.94
COL2A1P02458 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC2.94□□□□□ -1.94
COL2A1P02458 MTND5P27-201ENST00000428871 1720 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms