Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 Y_RNA.433-201ENST00000384089 102 ntBASIC1.4□□□□□ -2.19
COL1A1P02452 RNU6-921P-201ENST00000384361 107 ntBASIC1.4□□□□□ -2.19
COL1A1P02452 RNU6-997P-201ENST00000384725 107 ntBASIC1.4□□□□□ -2.19
COL1A1P02452 CYCSP48-201ENST00000417124 323 ntBASIC1.4□□□□□ -2.19
COL1A1P02452 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC1.4□□□□□ -2.19
COL1A1P02452 AC024082.2-201ENST00000434771 238 ntBASIC1.4□□□□□ -2.19
COL1A1P02452 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.4□□□□□ -2.19
COL1A1P02452 MTCO1P48-201ENST00000448024 1096 ntBASIC1.4□□□□□ -2.19
COL1A1P02452 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.4□□□□□ -2.19
COL1A1P02452 AC093852.1-201ENST00000503587 266 ntBASIC1.4□□□□□ -2.19
COL1A1P02452 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.4□□□□□ -2.19
COL1A1P02452 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.4□□□□□ -2.19
COL1A1P02452 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC1.4□□□□□ -2.19
COL1A1P02452 RNU5F-8P-201ENST00000515941 111 ntBASIC1.4□□□□□ -2.19
COL1A1P02452 SNORA31.25-201ENST00000517242 134 ntBASIC1.4□□□□□ -2.19
COL1A1P02452 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC1.4□□□□□ -2.19
COL1A1P02452 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC1.4□□□□□ -2.19
COL1A1P02452 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.4□□□□□ -2.19
COL1A1P02452 AC015688.2-201ENST00000584523 262 ntBASIC1.4□□□□□ -2.19
COL1A1P02452 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC1.4□□□□□ -2.19
COL1A1P02452 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC1.4□□□□□ -2.19
COL1A1P02452 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
COL1A1P02452 AC009032.1-201ENST00000617574 431 ntBASIC1.4□□□□□ -2.19
COL1A1P02452 AC011330.2-201ENST00000621680 635 ntBASIC1.4□□□□□ -2.19
COL1A1P02452 AC008133.2-201ENST00000624540 351 ntBASIC1.4□□□□□ -2.19
COL1A1P02452 AP003400.6-201ENST00000624698 740 ntBASIC1.4□□□□□ -2.19
COL1A1P02452 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.4□□□□□ -2.19
COL1A1P02452 ENSAP3-201ENST00000312710 333 ntBASIC1.39□□□□□ -2.19
COL1A1P02452 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
COL1A1P02452 Y_RNA.458-201ENST00000384240 102 ntBASIC1.39□□□□□ -2.19
COL1A1P02452 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
COL1A1P02452 MIR676-201ENST00000390702 67 ntBASIC1.39□□□□□ -2.19
COL1A1P02452 AL355615.1-201ENST00000406187 641 ntBASIC1.39□□□□□ -2.19
COL1A1P02452 RN7SKP158-201ENST00000410453 326 ntBASIC1.39□□□□□ -2.19
COL1A1P02452 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.39□□□□□ -2.19
COL1A1P02452 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC1.39□□□□□ -2.19
COL1A1P02452 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.39□□□□□ -2.19
COL1A1P02452 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC1.39□□□□□ -2.19
COL1A1P02452 KLF3P2-201ENST00000465138 268 ntBASIC1.39□□□□□ -2.19
COL1A1P02452 AC087343.1-201ENST00000477341 475 ntBASIC1.39□□□□□ -2.19
COL1A1P02452 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.39□□□□□ -2.19
COL1A1P02452 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.39□□□□□ -2.19
COL1A1P02452 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC1.39□□□□□ -2.19
COL1A1P02452 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.39□□□□□ -2.19
COL1A1P02452 AC010186.2-204ENST00000537668 439 ntBASIC1.39□□□□□ -2.19
COL1A1P02452 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC1.39□□□□□ -2.19
COL1A1P02452 MIR5000-201ENST00000577717 103 ntBASIC1.39□□□□□ -2.19
COL1A1P02452 AL109918.3-201ENST00000603072 338 ntBASIC1.39□□□□□ -2.19
COL1A1P02452 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.39□□□□□ -2.19
COL1A1P02452 AC090772.4-201ENST00000623599 362 ntBASIC1.39□□□□□ -2.19
COL1A1P02452 AL590396.2-201ENST00000636511 1041 ntBASIC1.39□□□□□ -2.19
COL1A1P02452 SEC63P2-201ENST00000503863 1939 ntBASIC1.39□□□□□ -2.19
COL1A1P02452 AL161722.3-201ENST00000605789 2983 ntBASIC1.39□□□□□ -2.19
COL1A1P02452 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.38□□□□□ -2.19
COL1A1P02452 RNA5SP457-201ENST00000363657 124 ntBASIC1.38□□□□□ -2.19
COL1A1P02452 RNU6-516P-201ENST00000411381 104 ntBASIC1.38□□□□□ -2.19
COL1A1P02452 ZNF92P1Y-201ENST00000415010 1191 ntBASIC1.38□□□□□ -2.19
COL1A1P02452 SNRPEP10-201ENST00000420249 274 ntBASIC1.38□□□□□ -2.19
COL1A1P02452 RPL31P63-201ENST00000422565 375 ntBASIC1.38□□□□□ -2.19
COL1A1P02452 AL445305.1-201ENST00000432577 575 ntBASIC1.38□□□□□ -2.19
COL1A1P02452 SUMO2P6-201ENST00000505273 288 ntBASIC1.38□□□□□ -2.19
COL1A1P02452 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC1.38□□□□□ -2.19
COL1A1P02452 DUXAP5-201ENST00000529668 529 ntBASIC1.38□□□□□ -2.19
COL1A1P02452 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.38□□□□□ -2.19
COL1A1P02452 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.38□□□□□ -2.19
COL1A1P02452 AC004908.2-201ENST00000609090 574 ntBASIC1.38□□□□□ -2.19
COL1A1P02452 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
COL1A1P02452 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.38□□□□□ -2.19
COL1A1P02452 MIR525-201ENST00000384978 85 ntBASIC1.37□□□□□ -2.19
COL1A1P02452 MIR216A-201ENST00000385063 110 ntBASIC1.37□□□□□ -2.19
COL1A1P02452 MIR325-201ENST00000385260 98 ntBASIC1.37□□□□□ -2.19
COL1A1P02452 AL512604.1-201ENST00000404812 257 ntBASIC1.37□□□□□ -2.19
COL1A1P02452 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.37□□□□□ -2.19
COL1A1P02452 MICF-203ENST00000432679 129 ntBASIC1.37□□□□□ -2.19
COL1A1P02452 AC015922.2-201ENST00000435593 184 ntBASIC1.37□□□□□ -2.19
COL1A1P02452 TAAR7P-201ENST00000436141 242 ntBASIC1.37□□□□□ -2.19
COL1A1P02452 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.37□□□□□ -2.19
COL1A1P02452 AC008837.2-201ENST00000513076 418 ntBASIC1.37□□□□□ -2.19
COL1A1P02452 AP005597.4-201ENST00000526762 229 ntBASIC1.37□□□□□ -2.19
COL1A1P02452 MIR4529-201ENST00000578110 78 ntBASIC1.37□□□□□ -2.19
COL1A1P02452 AC109809.1-201ENST00000619665 545 ntBASIC1.37□□□□□ -2.19
COL1A1P02452 AC009318.4-201ENST00000620496 486 ntBASIC1.37□□□□□ -2.19
COL1A1P02452 AL049641.1-201ENST00000441055 1948 ntBASIC1.37□□□□□ -2.19
COL1A1P02452 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
COL1A1P02452 RNU1-133P-201ENST00000364867 167 ntBASIC1.37□□□□□ -2.19
COL1A1P02452 XKRYP1-201ENST00000423438 492 ntBASIC1.37□□□□□ -2.19
COL1A1P02452 HMGB1P9-201ENST00000429856 646 ntBASIC1.37□□□□□ -2.19
COL1A1P02452 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
COL1A1P02452 XKRYP2-201ENST00000432915 492 ntBASIC1.37□□□□□ -2.19
COL1A1P02452 UBE2V2P3-201ENST00000433562 437 ntBASIC1.37□□□□□ -2.19
COL1A1P02452 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC1.37□□□□□ -2.19
COL1A1P02452 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC1.37□□□□□ -2.19
COL1A1P02452 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC1.37□□□□□ -2.19
COL1A1P02452 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.37□□□□□ -2.19
COL1A1P02452 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.37□□□□□ -2.19
COL1A1P02452 RNU5A-7P-201ENST00000515979 116 ntBASIC1.37□□□□□ -2.19
COL1A1P02452 OR5AK1P-201ENST00000524837 922 ntBASIC1.37□□□□□ -2.19
COL1A1P02452 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.37□□□□□ -2.19
COL1A1P02452 AC025918.2-201ENST00000558683 763 ntBASIC1.37□□□□□ -2.19
COL1A1P02452 AC023825.1-201ENST00000566704 1030 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms