Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.03□□□□□ -1.92
GGPS1O95749 RNU6-953P-201ENST00000459154 107 ntBASIC3.03□□□□□ -1.92
GGPS1O95749 MTND1P3-201ENST00000484956 952 ntBASIC3.03□□□□□ -1.92
GGPS1O95749 RPS27AP10-201ENST00000496103 208 ntBASIC3.03□□□□□ -1.92
GGPS1O95749 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.03□□□□□ -1.92
GGPS1O95749 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.03□□□□□ -1.92
GGPS1O95749 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.03□□□□□ -1.92
GGPS1O95749 NDUFB4P2-201ENST00000509515 391 ntBASIC3.03□□□□□ -1.92
GGPS1O95749 AC096725.1-201ENST00000514266 313 ntBASIC3.03□□□□□ -1.92
GGPS1O95749 Y_RNA.672-201ENST00000516289 104 ntBASIC3.03□□□□□ -1.92
GGPS1O95749 RNU7-51P-201ENST00000516560 62 ntBASIC3.03□□□□□ -1.92
GGPS1O95749 AC087373.1-201ENST00000524920 491 ntBASIC3.03□□□□□ -1.92
GGPS1O95749 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.03□□□□□ -1.92
GGPS1O95749 AC234778.2-201ENST00000566241 354 ntBASIC3.03□□□□□ -1.92
GGPS1O95749 AC010546.1-201ENST00000569391 485 ntBASIC3.03□□□□□ -1.92
GGPS1O95749 MTCO3P13-201ENST00000577757 781 ntBASIC3.03□□□□□ -1.92
GGPS1O95749 AC005498.1-201ENST00000592125 465 ntBASIC3.03□□□□□ -1.92
GGPS1O95749 AL451064.1-201ENST00000607718 471 ntBASIC3.03□□□□□ -1.92
GGPS1O95749 AL365204.3-201ENST00000612448 685 ntBASIC3.03□□□□□ -1.92
GGPS1O95749 AC092608.2-201ENST00000624427 218 ntBASIC3.03□□□□□ -1.92
GGPS1O95749 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
GGPS1O95749 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
GGPS1O95749 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
GGPS1O95749 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
GGPS1O95749 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.03□□□□□ -1.93
GGPS1O95749 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.03□□□□□ -1.93
GGPS1O95749 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
GGPS1O95749 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.03□□□□□ -1.93
GGPS1O95749 CR848007.1-201ENST00000442354 1699 ntBASIC3.02□□□□□ -1.93
GGPS1O95749 AF228730.1-201ENST00000397972 663 ntBASIC3.02□□□□□ -1.93
GGPS1O95749 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.02□□□□□ -1.93
GGPS1O95749 BPY2DP-201ENST00000422208 265 ntBASIC3.02□□□□□ -1.93
GGPS1O95749 AC093106.2-201ENST00000428212 385 ntBASIC3.02□□□□□ -1.93
GGPS1O95749 PGBD4P3-201ENST00000440731 581 ntBASIC3.02□□□□□ -1.93
GGPS1O95749 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.02□□□□□ -1.93
GGPS1O95749 RPL39P36-201ENST00000490784 156 ntBASIC3.02□□□□□ -1.93
GGPS1O95749 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.02□□□□□ -1.93
GGPS1O95749 SNORA9.3-201ENST00000516383 129 ntBASIC3.02□□□□□ -1.93
GGPS1O95749 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.02□□□□□ -1.93
GGPS1O95749 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
GGPS1O95749 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.02□□□□□ -1.93
GGPS1O95749 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.02□□□□□ -1.93
GGPS1O95749 AC023043.3-201ENST00000593113 385 ntBASIC3.02□□□□□ -1.93
GGPS1O95749 BNIP3P8-201ENST00000597863 560 ntBASIC3.02□□□□□ -1.93
GGPS1O95749 AL355598.1-201ENST00000604169 202 ntBASIC3.02□□□□□ -1.93
GGPS1O95749 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
GGPS1O95749 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.02□□□□□ -1.93
GGPS1O95749 AC025048.6-202ENST00000627667 438 ntBASIC3.02□□□□□ -1.93
GGPS1O95749 MTND5P42-201ENST00000637720 498 ntBASIC3.02□□□□□ -1.93
GGPS1O95749 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
GGPS1O95749 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
GGPS1O95749 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
GGPS1O95749 AC138915.1-201ENST00000565427 1685 ntBASIC3.01□□□□□ -1.93
GGPS1O95749 ASNSP3-201ENST00000451989 1306 ntBASIC3.01□□□□□ -1.93
GGPS1O95749 RNU5E-1-201ENST00000362477 120 ntBASIC3.01□□□□□ -1.93
GGPS1O95749 RNA5SP68-201ENST00000363885 119 ntBASIC3.01□□□□□ -1.93
GGPS1O95749 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
GGPS1O95749 RPL23AP32-201ENST00000395315 459 ntBASIC3.01□□□□□ -1.93
GGPS1O95749 AL139039.1-201ENST00000401900 692 ntBASIC3.01□□□□□ -1.93
GGPS1O95749 AC023141.4-201ENST00000412031 328 ntBASIC3.01□□□□□ -1.93
GGPS1O95749 AL139413.1-201ENST00000421309 217 ntBASIC3.01□□□□□ -1.93
GGPS1O95749 AL358075.3-201ENST00000426289 226 ntBASIC3.01□□□□□ -1.93
GGPS1O95749 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
GGPS1O95749 SETP8-201ENST00000435341 628 ntBASIC3.01□□□□□ -1.93
GGPS1O95749 MTND4P25-201ENST00000441039 533 ntBASIC3.01□□□□□ -1.93
GGPS1O95749 USP9YP15-201ENST00000442391 422 ntBASIC3.01□□□□□ -1.93
GGPS1O95749 MTND6P13-201ENST00000443510 523 ntBASIC3.01□□□□□ -1.93
GGPS1O95749 RPS15AP27-201ENST00000449183 343 ntBASIC3.01□□□□□ -1.93
GGPS1O95749 RPS3P1-201ENST00000456781 192 ntBASIC3.01□□□□□ -1.93
GGPS1O95749 RPL31P41-201ENST00000477967 372 ntBASIC3.01□□□□□ -1.93
GGPS1O95749 RN7SL429P-201ENST00000479090 223 ntBASIC3.01□□□□□ -1.93
GGPS1O95749 RN7SL489P-201ENST00000486185 223 ntBASIC3.01□□□□□ -1.93
GGPS1O95749 RN7SL327P-201ENST00000488659 223 ntBASIC3.01□□□□□ -1.93
GGPS1O95749 AC113155.1-201ENST00000511141 769 ntBASIC3.01□□□□□ -1.93
GGPS1O95749 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.01□□□□□ -1.93
GGPS1O95749 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.01□□□□□ -1.93
GGPS1O95749 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.01□□□□□ -1.93
GGPS1O95749 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.01□□□□□ -1.93
GGPS1O95749 AC007834.2-201ENST00000536310 343 ntBASIC3.01□□□□□ -1.93
GGPS1O95749 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.01□□□□□ -1.93
GGPS1O95749 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.01□□□□□ -1.93
GGPS1O95749 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC3.01□□□□□ -1.93
GGPS1O95749 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.01□□□□□ -1.93
GGPS1O95749 AL355877.2-201ENST00000603670 358 ntBASIC3.01□□□□□ -1.93
GGPS1O95749 AP002360.4-201ENST00000606980 481 ntBASIC3.01□□□□□ -1.93
GGPS1O95749 AC005046.1-201ENST00000608515 625 ntBASIC3.01□□□□□ -1.93
GGPS1O95749 AC091304.9-201ENST00000612091 226 ntBASIC3.01□□□□□ -1.93
GGPS1O95749 MIR6817-201ENST00000615588 66 ntBASIC3.01□□□□□ -1.93
GGPS1O95749 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
GGPS1O95749 RN7SL853P-201ENST00000617250 223 ntBASIC3.01□□□□□ -1.93
GGPS1O95749 AC108479.2-201ENST00000617314 601 ntBASIC3.01□□□□□ -1.93
GGPS1O95749 AL603839.4-201ENST00000624658 1005 ntBASIC3.01□□□□□ -1.93
GGPS1O95749 AC243829.7-201ENST00000633081 225 ntBASIC3.01□□□□□ -1.93
GGPS1O95749 MIR6733-201ENST00000635723 61 ntBASIC3.01□□□□□ -1.93
GGPS1O95749 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
GGPS1O95749 ELF2P3-201ENST00000445099 1506 ntBASIC3.01□□□□□ -1.93
GGPS1O95749 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.01□□□□□ -1.93
GGPS1O95749 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
GGPS1O95749 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.01□□□□□ -1.93
GGPS1O95749 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms