Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC0.96□□□□□ -2.26
ABCA1O95477 AL021997.1-201ENST00000605757 193 ntBASIC0.96□□□□□ -2.26
ABCA1O95477 AP000648.3-201ENST00000623539 4507 ntBASIC0.96□□□□□ -2.26
ABCA1O95477 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
ABCA1O95477 AC016716.1-201ENST00000265882 708 ntBASIC0.95□□□□□ -2.26
ABCA1O95477 RNU6-1155P-201ENST00000363554 107 ntBASIC0.95□□□□□ -2.26
ABCA1O95477 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC0.95□□□□□ -2.26
ABCA1O95477 RNU6-203P-201ENST00000384038 104 ntBASIC0.95□□□□□ -2.26
ABCA1O95477 MIR216A-201ENST00000385063 110 ntBASIC0.95□□□□□ -2.26
ABCA1O95477 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
ABCA1O95477 RNU6-955P-201ENST00000410497 104 ntBASIC0.95□□□□□ -2.26
ABCA1O95477 RNA5SP450-201ENST00000411206 102 ntBASIC0.95□□□□□ -2.26
ABCA1O95477 DBF4P1-201ENST00000412976 1892 ntBASIC0.95□□□□□ -2.26
ABCA1O95477 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC0.95□□□□□ -2.26
ABCA1O95477 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC0.95□□□□□ -2.26
ABCA1O95477 CABYRP1-201ENST00000465493 1045 ntBASIC0.95□□□□□ -2.26
ABCA1O95477 AC092902.1-201ENST00000486999 259 ntBASIC0.95□□□□□ -2.26
ABCA1O95477 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
ABCA1O95477 AF213884.2-201ENST00000510417 903 ntBASIC0.95□□□□□ -2.26
ABCA1O95477 AC093770.1-201ENST00000511559 571 ntBASIC0.95□□□□□ -2.26
ABCA1O95477 RNU6-760P-201ENST00000516078 97 ntBASIC0.95□□□□□ -2.26
ABCA1O95477 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC0.95□□□□□ -2.26
ABCA1O95477 AL031176.1-201ENST00000604554 466 ntBASIC0.95□□□□□ -2.26
ABCA1O95477 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
ABCA1O95477 AC243773.3-201ENST00000613270 256 ntBASIC0.95□□□□□ -2.26
ABCA1O95477 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC0.95□□□□□ -2.26
ABCA1O95477 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
ABCA1O95477 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
ABCA1O95477 RNU6-217P-201ENST00000384164 104 ntBASIC0.95□□□□□ -2.26
ABCA1O95477 MIR625-201ENST00000385047 85 ntBASIC0.95□□□□□ -2.26
ABCA1O95477 MIR325-201ENST00000385260 98 ntBASIC0.95□□□□□ -2.26
ABCA1O95477 RNU6-1328P-201ENST00000410938 106 ntBASIC0.95□□□□□ -2.26
ABCA1O95477 AC023141.4-201ENST00000412031 328 ntBASIC0.95□□□□□ -2.26
ABCA1O95477 TRIM60P5Y-201ENST00000413946 574 ntBASIC0.95□□□□□ -2.26
ABCA1O95477 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC0.95□□□□□ -2.26
ABCA1O95477 AC005534.2-201ENST00000431047 433 ntBASIC0.95□□□□□ -2.26
ABCA1O95477 MTCO1P57-201ENST00000432182 261 ntBASIC0.95□□□□□ -2.26
ABCA1O95477 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC0.95□□□□□ -2.26
ABCA1O95477 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC0.95□□□□□ -2.26
ABCA1O95477 AC138853.1-201ENST00000503549 823 ntBASIC0.95□□□□□ -2.26
ABCA1O95477 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC0.95□□□□□ -2.26
ABCA1O95477 LSM6P2-201ENST00000552208 177 ntBASIC0.95□□□□□ -2.26
ABCA1O95477 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC0.95□□□□□ -2.26
ABCA1O95477 AC068338.1-201ENST00000565567 176 ntBASIC0.95□□□□□ -2.26
ABCA1O95477 AL096840.1-201ENST00000603287 93 ntBASIC0.95□□□□□ -2.26
ABCA1O95477 AL590095.2-201ENST00000604136 117 ntBASIC0.95□□□□□ -2.26
ABCA1O95477 MFSD8-213ENST00000641134 1327 ntBASIC0.94□□□□□ -2.26
ABCA1O95477 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC0.94□□□□□ -2.26
ABCA1O95477 SEC63P2-201ENST00000503863 1939 ntBASIC0.94□□□□□ -2.26
ABCA1O95477 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
ABCA1O95477 AL139098.1-201ENST00000407291 389 ntBASIC0.94□□□□□ -2.26
ABCA1O95477 VN1R36P-201ENST00000414936 291 ntBASIC0.94□□□□□ -2.26
ABCA1O95477 AC096649.2-201ENST00000416186 393 ntBASIC0.94□□□□□ -2.26
ABCA1O95477 EBAG9P1-201ENST00000418955 543 ntBASIC0.94□□□□□ -2.26
ABCA1O95477 AC012497.1-201ENST00000429392 575 ntBASIC0.94□□□□□ -2.26
ABCA1O95477 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC0.94□□□□□ -2.26
ABCA1O95477 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC0.94□□□□□ -2.26
ABCA1O95477 DYNLL1P5-201ENST00000467158 270 ntBASIC0.94□□□□□ -2.26
ABCA1O95477 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.94□□□□□ -2.26
ABCA1O95477 ARL2BPP4-201ENST00000506854 471 ntBASIC0.94□□□□□ -2.26
ABCA1O95477 RN7SKP265-201ENST00000516448 223 ntBASIC0.94□□□□□ -2.26
ABCA1O95477 CR383656.8-201ENST00000549046 145 ntBASIC0.94□□□□□ -2.26
ABCA1O95477 AL031274.2-201ENST00000599419 203 ntBASIC0.94□□□□□ -2.26
ABCA1O95477 AC123912.5-201ENST00000605470 343 ntBASIC0.94□□□□□ -2.26
ABCA1O95477 AC073569.3-201ENST00000619055 682 ntBASIC0.94□□□□□ -2.26
ABCA1O95477 AC091932.3-201ENST00000624223 323 ntBASIC0.94□□□□□ -2.26
ABCA1O95477 AL159972.1-201ENST00000625150 448 ntBASIC0.94□□□□□ -2.26
ABCA1O95477 AP003399.1-201ENST00000637534 361 ntBASIC0.94□□□□□ -2.26
ABCA1O95477 DDX43P2-201ENST00000604753 1354 ntBASIC0.94□□□□□ -2.26
ABCA1O95477 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
ABCA1O95477 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
ABCA1O95477 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
ABCA1O95477 RNU1-72P-201ENST00000362976 153 ntBASIC0.94□□□□□ -2.26
ABCA1O95477 RNA5SP257-201ENST00000363023 116 ntBASIC0.94□□□□□ -2.26
ABCA1O95477 SNORA16B-201ENST00000364674 135 ntBASIC0.94□□□□□ -2.26
ABCA1O95477 RNA5SP240-201ENST00000365355 128 ntBASIC0.94□□□□□ -2.26
ABCA1O95477 MIR520E-201ENST00000384867 87 ntBASIC0.94□□□□□ -2.26
ABCA1O95477 MIR193B-201ENST00000384907 83 ntBASIC0.94□□□□□ -2.26
ABCA1O95477 MIR525-201ENST00000384978 85 ntBASIC0.94□□□□□ -2.26
ABCA1O95477 TAF9BP2-201ENST00000400856 499 ntBASIC0.94□□□□□ -2.26
ABCA1O95477 AL109913.1-201ENST00000421173 514 ntBASIC0.94□□□□□ -2.26
ABCA1O95477 RPL30P4-201ENST00000429309 333 ntBASIC0.94□□□□□ -2.26
ABCA1O95477 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC0.94□□□□□ -2.26
ABCA1O95477 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC0.94□□□□□ -2.26
ABCA1O95477 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.94□□□□□ -2.26
ABCA1O95477 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC0.94□□□□□ -2.26
ABCA1O95477 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.94□□□□□ -2.26
ABCA1O95477 AC004865.1-201ENST00000442276 1003 ntBASIC0.94□□□□□ -2.26
ABCA1O95477 RAB11AP1-201ENST00000442978 646 ntBASIC0.94□□□□□ -2.26
ABCA1O95477 RPS29P28-201ENST00000446439 141 ntBASIC0.94□□□□□ -2.26
ABCA1O95477 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC0.94□□□□□ -2.26
ABCA1O95477 AC147055.4-201ENST00000504399 745 ntBASIC0.94□□□□□ -2.26
ABCA1O95477 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC0.94□□□□□ -2.26
ABCA1O95477 RNA5SP476-201ENST00000516613 103 ntBASIC0.94□□□□□ -2.26
ABCA1O95477 HIGD1AP6-201ENST00000521833 279 ntBASIC0.94□□□□□ -2.26
ABCA1O95477 MAL2-206ENST00000522187 547 ntTSL 4 BASIC0.94□□□□□ -2.26
ABCA1O95477 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC0.94□□□□□ -2.26
ABCA1O95477 RN7SL793P-201ENST00000583259 296 ntBASIC0.94□□□□□ -2.26
ABCA1O95477 AP001269.3-201ENST00000588718 329 ntBASIC0.94□□□□□ -2.26
ABCA1O95477 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms