Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC139453.3-201ENST00000493276 369 ntBASIC3.05□□□□□ -1.92
NKX2-2O95096 AC026801.1-201ENST00000497178 464 ntBASIC3.05□□□□□ -1.92
NKX2-2O95096 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.05□□□□□ -1.92
NKX2-2O95096 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.05□□□□□ -1.92
NKX2-2O95096 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.05□□□□□ -1.92
NKX2-2O95096 AK6P1-201ENST00000540219 478 ntBASIC3.05□□□□□ -1.92
NKX2-2O95096 AL157687.1-201ENST00000554853 619 ntBASIC3.05□□□□□ -1.92
NKX2-2O95096 H3F3AP1-201ENST00000559984 334 ntBASIC3.05□□□□□ -1.92
NKX2-2O95096 AC136619.2-201ENST00000563361 631 ntBASIC3.05□□□□□ -1.92
NKX2-2O95096 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.05□□□□□ -1.92
NKX2-2O95096 AC025678.1-201ENST00000567861 338 ntBASIC3.05□□□□□ -1.92
NKX2-2O95096 AC093788.1-201ENST00000609356 927 ntBASIC3.05□□□□□ -1.92
NKX2-2O95096 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.05□□□□□ -1.92
NKX2-2O95096 AL354950.2-201ENST00000617939 290 ntBASIC3.05□□□□□ -1.92
NKX2-2O95096 AC024940.5-201ENST00000622889 474 ntBASIC3.05□□□□□ -1.92
NKX2-2O95096 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
NKX2-2O95096 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
NKX2-2O95096 HSPA8P4-201ENST00000511877 1920 ntBASIC3.05□□□□□ -1.92
NKX2-2O95096 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.05□□□□□ -1.92
NKX2-2O95096 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
NKX2-2O95096 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
NKX2-2O95096 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.04□□□□□ -1.92
NKX2-2O95096 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.04□□□□□ -1.92
NKX2-2O95096 MTND4P5-201ENST00000435821 1374 ntBASIC3.04□□□□□ -1.92
NKX2-2O95096 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
NKX2-2O95096 CKAP2P1-201ENST00000555477 2049 ntBASIC3.04□□□□□ -1.92
NKX2-2O95096 SRP72P2-201ENST00000344851 1979 ntBASIC3.04□□□□□ -1.92
NKX2-2O95096 RNU6-552P-201ENST00000362869 119 ntBASIC3.04□□□□□ -1.92
NKX2-2O95096 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
NKX2-2O95096 RNU1-73P-201ENST00000383971 164 ntBASIC3.04□□□□□ -1.92
NKX2-2O95096 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
NKX2-2O95096 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.04□□□□□ -1.92
NKX2-2O95096 CIR1P3-201ENST00000405137 479 ntBASIC3.04□□□□□ -1.92
NKX2-2O95096 RNA5SP111-201ENST00000411386 101 ntBASIC3.04□□□□□ -1.92
NKX2-2O95096 FCF1P9-201ENST00000412546 282 ntBASIC3.04□□□□□ -1.92
NKX2-2O95096 NDUFS5P4-201ENST00000412983 318 ntBASIC3.04□□□□□ -1.92
NKX2-2O95096 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.04□□□□□ -1.92
NKX2-2O95096 AL159169.1-201ENST00000421119 127 ntBASIC3.04□□□□□ -1.92
NKX2-2O95096 RPL31P12-201ENST00000422587 358 ntBASIC3.04□□□□□ -1.92
NKX2-2O95096 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.04□□□□□ -1.92
NKX2-2O95096 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
NKX2-2O95096 HMGB1P9-201ENST00000429856 646 ntBASIC3.04□□□□□ -1.92
NKX2-2O95096 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.04□□□□□ -1.92
NKX2-2O95096 CYCSP35-201ENST00000451978 304 ntBASIC3.04□□□□□ -1.92
NKX2-2O95096 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.04□□□□□ -1.92
NKX2-2O95096 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.04□□□□□ -1.92
NKX2-2O95096 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.04□□□□□ -1.92
NKX2-2O95096 AL136097.1-201ENST00000456945 913 ntBASIC3.04□□□□□ -1.92
NKX2-2O95096 RPL26P9-201ENST00000457466 433 ntBASIC3.04□□□□□ -1.92
NKX2-2O95096 AC092798.1-201ENST00000458542 409 ntBASIC3.04□□□□□ -1.92
NKX2-2O95096 AP002884.2-201ENST00000471647 395 ntBASIC3.04□□□□□ -1.92
NKX2-2O95096 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.04□□□□□ -1.92
NKX2-2O95096 RNU1-103P-201ENST00000516502 125 ntBASIC3.04□□□□□ -1.92
NKX2-2O95096 RNU6-835P-201ENST00000516974 104 ntBASIC3.04□□□□□ -1.92
NKX2-2O95096 SNORA31.21-201ENST00000517180 77 ntBASIC3.04□□□□□ -1.92
NKX2-2O95096 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.04□□□□□ -1.92
NKX2-2O95096 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.04□□□□□ -1.92
NKX2-2O95096 AC025165.5-201ENST00000602802 578 ntBASIC3.04□□□□□ -1.92
NKX2-2O95096 AC073657.2-201ENST00000605661 303 ntBASIC3.04□□□□□ -1.92
NKX2-2O95096 AP003122.6-201ENST00000623831 495 ntBASIC3.04□□□□□ -1.92
NKX2-2O95096 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
NKX2-2O95096 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.04□□□□□ -1.92
NKX2-2O95096 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
NKX2-2O95096 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.04□□□□□ -1.92
NKX2-2O95096 AC027514.1-201ENST00000588561 1603 ntBASIC3.04□□□□□ -1.92
NKX2-2O95096 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
NKX2-2O95096 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.03□□□□□ -1.92
NKX2-2O95096 MTND4P35-201ENST00000604257 1375 ntBASIC3.03□□□□□ -1.92
NKX2-2O95096 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
NKX2-2O95096 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
NKX2-2O95096 NACAP2-201ENST00000318548 624 ntBASIC3.03□□□□□ -1.92
NKX2-2O95096 Y_RNA.9-201ENST00000362354 101 ntBASIC3.03□□□□□ -1.92
NKX2-2O95096 RNU6-116P-201ENST00000384042 109 ntBASIC3.03□□□□□ -1.92
NKX2-2O95096 Y_RNA.554-201ENST00000384672 102 ntBASIC3.03□□□□□ -1.92
NKX2-2O95096 MIR183-201ENST00000384958 110 ntBASIC3.03□□□□□ -1.92
NKX2-2O95096 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
NKX2-2O95096 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
NKX2-2O95096 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.03□□□□□ -1.92
NKX2-2O95096 RNU6-1025P-201ENST00000410629 104 ntBASIC3.03□□□□□ -1.92
NKX2-2O95096 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.03□□□□□ -1.92
NKX2-2O95096 USP9YP6-201ENST00000413550 854 ntBASIC3.03□□□□□ -1.92
NKX2-2O95096 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
NKX2-2O95096 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.03□□□□□ -1.92
NKX2-2O95096 MTCYBP8-201ENST00000422855 651 ntBASIC3.03□□□□□ -1.92
NKX2-2O95096 USP9YP18-201ENST00000425912 695 ntBASIC3.03□□□□□ -1.92
NKX2-2O95096 AC098614.2-201ENST00000426040 255 ntBASIC3.03□□□□□ -1.92
NKX2-2O95096 C8orf59P1-201ENST00000429930 303 ntBASIC3.03□□□□□ -1.92
NKX2-2O95096 AC097713.2-201ENST00000430199 356 ntBASIC3.03□□□□□ -1.92
NKX2-2O95096 ARF4P2-201ENST00000430209 526 ntBASIC3.03□□□□□ -1.92
NKX2-2O95096 CYCSP32-201ENST00000440548 321 ntBASIC3.03□□□□□ -1.92
NKX2-2O95096 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.03□□□□□ -1.92
NKX2-2O95096 RPL37P4-201ENST00000448908 268 ntBASIC3.03□□□□□ -1.92
NKX2-2O95096 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.03□□□□□ -1.92
NKX2-2O95096 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.03□□□□□ -1.92
NKX2-2O95096 RPL21P41-201ENST00000459863 264 ntBASIC3.03□□□□□ -1.92
NKX2-2O95096 RPL21P10-201ENST00000463521 490 ntBASIC3.03□□□□□ -1.92
NKX2-2O95096 FTH1P2-201ENST00000466086 412 ntBASIC3.03□□□□□ -1.92
NKX2-2O95096 TRBV1-201ENST00000476502 284 ntBASIC3.03□□□□□ -1.92
NKX2-2O95096 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC3.03□□□□□ -1.92
NKX2-2O95096 RPS27AP10-201ENST00000496103 208 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms