Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.06□□□□□ -1.92
BEST1O76090 LARP7P3-201ENST00000579888 337 ntBASIC3.06□□□□□ -1.92
BEST1O76090 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.06□□□□□ -1.92
BEST1O76090 AC109347.2-201ENST00000610220 349 ntBASIC3.06□□□□□ -1.92
BEST1O76090 AL359547.2-201ENST00000615810 418 ntBASIC3.06□□□□□ -1.92
BEST1O76090 AC090617.7-201ENST00000623952 126 ntBASIC3.06□□□□□ -1.92
BEST1O76090 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
BEST1O76090 AC093831.2-201ENST00000624393 3427 ntBASIC3.06□□□□□ -1.92
BEST1O76090 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.05□□□□□ -1.92
BEST1O76090 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.05□□□□□ -1.92
BEST1O76090 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.05□□□□□ -1.92
BEST1O76090 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.05□□□□□ -1.92
BEST1O76090 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
BEST1O76090 RNU6-641P-201ENST00000384006 107 ntBASIC3.05□□□□□ -1.92
BEST1O76090 MIR23A-201ENST00000385245 73 ntBASIC3.05□□□□□ -1.92
BEST1O76090 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.05□□□□□ -1.92
BEST1O76090 COTL1P1-201ENST00000422309 375 ntBASIC3.05□□□□□ -1.92
BEST1O76090 RPL7P37-201ENST00000425095 738 ntBASIC3.05□□□□□ -1.92
BEST1O76090 FABP5P13-201ENST00000452144 328 ntBASIC3.05□□□□□ -1.92
BEST1O76090 RPL31P3-201ENST00000458430 332 ntBASIC3.05□□□□□ -1.92
BEST1O76090 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.05□□□□□ -1.92
BEST1O76090 AC105252.1-201ENST00000503089 286 ntBASIC3.05□□□□□ -1.92
BEST1O76090 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.05□□□□□ -1.92
BEST1O76090 RN7SKP43-201ENST00000516173 320 ntBASIC3.05□□□□□ -1.92
BEST1O76090 AP003072.2-201ENST00000527756 676 ntBASIC3.05□□□□□ -1.92
BEST1O76090 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.05□□□□□ -1.92
BEST1O76090 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.05□□□□□ -1.92
BEST1O76090 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.05□□□□□ -1.92
BEST1O76090 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.05□□□□□ -1.92
BEST1O76090 MIR1273C-201ENST00000578669 77 ntBASIC3.05□□□□□ -1.92
BEST1O76090 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.05□□□□□ -1.92
BEST1O76090 AC073544.2-201ENST00000601155 540 ntBASIC3.05□□□□□ -1.92
BEST1O76090 AC245014.2-201ENST00000603689 287 ntBASIC3.05□□□□□ -1.92
BEST1O76090 AC064872.1-201ENST00000604823 1072 ntBASIC3.05□□□□□ -1.92
BEST1O76090 AC246785.4-201ENST00000605374 287 ntBASIC3.05□□□□□ -1.92
BEST1O76090 AL139286.2-201ENST00000606838 396 ntBASIC3.05□□□□□ -1.92
BEST1O76090 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.05□□□□□ -1.92
BEST1O76090 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.05□□□□□ -1.92
BEST1O76090 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
BEST1O76090 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.05□□□□□ -1.92
BEST1O76090 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.05□□□□□ -1.92
BEST1O76090 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
BEST1O76090 OR5J1P-201ENST00000313544 939 ntBASIC3.04□□□□□ -1.92
BEST1O76090 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
BEST1O76090 SNORA9.2-201ENST00000365361 133 ntBASIC3.04□□□□□ -1.92
BEST1O76090 RNU6-658P-201ENST00000384606 106 ntBASIC3.04□□□□□ -1.92
BEST1O76090 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
BEST1O76090 AL512633.1-201ENST00000399931 655 ntBASIC3.04□□□□□ -1.92
BEST1O76090 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.04□□□□□ -1.92
BEST1O76090 MIR1302-8-201ENST00000408342 128 ntBASIC3.04□□□□□ -1.92
BEST1O76090 RNU2-49P-201ENST00000410666 184 ntBASIC3.04□□□□□ -1.92
BEST1O76090 AL592148.1-201ENST00000413568 445 ntBASIC3.04□□□□□ -1.92
BEST1O76090 MTND3P17-201ENST00000416968 344 ntBASIC3.04□□□□□ -1.92
BEST1O76090 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.04□□□□□ -1.92
BEST1O76090 AL353706.1-201ENST00000436728 494 ntBASIC3.04□□□□□ -1.92
BEST1O76090 AC244505.5-201ENST00000443639 207 ntBASIC3.04□□□□□ -1.92
BEST1O76090 AC079781.2-201ENST00000446424 169 ntBASIC3.04□□□□□ -1.92
BEST1O76090 HMGN2P10-201ENST00000448085 265 ntBASIC3.04□□□□□ -1.92
BEST1O76090 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.04□□□□□ -1.92
BEST1O76090 AC083906.5-201ENST00000503722 328 ntBASIC3.04□□□□□ -1.92
BEST1O76090 AC097462.2-201ENST00000504623 481 ntBASIC3.04□□□□□ -1.92
BEST1O76090 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.04□□□□□ -1.92
BEST1O76090 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.04□□□□□ -1.92
BEST1O76090 RN7SKP132-201ENST00000516001 208 ntBASIC3.04□□□□□ -1.92
BEST1O76090 RNU6-1315P-201ENST00000517187 99 ntBASIC3.04□□□□□ -1.92
BEST1O76090 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.04□□□□□ -1.92
BEST1O76090 AP000873.5-201ENST00000533906 236 ntBASIC3.04□□□□□ -1.92
BEST1O76090 ADI1P3-201ENST00000549509 470 ntBASIC3.04□□□□□ -1.92
BEST1O76090 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.04□□□□□ -1.92
BEST1O76090 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.04□□□□□ -1.92
BEST1O76090 MIR15A-201ENST00000607334 83 ntBASIC3.04□□□□□ -1.92
BEST1O76090 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.04□□□□□ -1.92
BEST1O76090 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
BEST1O76090 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.04□□□□□ -1.92
BEST1O76090 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
BEST1O76090 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.03□□□□□ -1.92
BEST1O76090 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.03□□□□□ -1.92
BEST1O76090 Y_RNA.22-201ENST00000362492 102 ntBASIC3.03□□□□□ -1.92
BEST1O76090 Y_RNA.201-201ENST00000364052 96 ntBASIC3.03□□□□□ -1.92
BEST1O76090 SNORA4.3-201ENST00000365564 137 ntBASIC3.03□□□□□ -1.92
BEST1O76090 RNU6-195P-201ENST00000411352 109 ntBASIC3.03□□□□□ -1.92
BEST1O76090 AC092809.3-201ENST00000415453 231 ntBASIC3.03□□□□□ -1.92
BEST1O76090 AC114491.1-201ENST00000416095 246 ntBASIC3.03□□□□□ -1.92
BEST1O76090 AL513477.1-202ENST00000417061 214 ntBASIC3.03□□□□□ -1.92
BEST1O76090 C1DP2-201ENST00000418167 426 ntBASIC3.03□□□□□ -1.92
BEST1O76090 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.03□□□□□ -1.92
BEST1O76090 Z96811.1-201ENST00000445880 108 ntBASIC3.03□□□□□ -1.92
BEST1O76090 AC003071.1-201ENST00000451219 789 ntBASIC3.03□□□□□ -1.92
BEST1O76090 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.03□□□□□ -1.92
BEST1O76090 RNU6-956P-201ENST00000458868 103 ntBASIC3.03□□□□□ -1.92
BEST1O76090 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.03□□□□□ -1.92
BEST1O76090 AC126389.1-201ENST00000477436 290 ntBASIC3.03□□□□□ -1.92
BEST1O76090 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.03□□□□□ -1.92
BEST1O76090 ARL2BPP4-201ENST00000506854 471 ntBASIC3.03□□□□□ -1.92
BEST1O76090 AC108078.2-201ENST00000510750 236 ntBASIC3.03□□□□□ -1.92
BEST1O76090 MRPS36P2-201ENST00000512569 299 ntBASIC3.03□□□□□ -1.92
BEST1O76090 SCARNA24.1-201ENST00000516465 137 ntBASIC3.03□□□□□ -1.92
BEST1O76090 AC090572.1-201ENST00000519251 160 ntBASIC3.03□□□□□ -1.92
BEST1O76090 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
BEST1O76090 AC079600.2-201ENST00000550076 130 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms