Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC4.85□□□□□ -1.63
PRPF40AO75400 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC4.85□□□□□ -1.63
PRPF40AO75400 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.85□□□□□ -1.63
PRPF40AO75400 TRAV28-201ENST00000557548 323 ntBASIC4.85□□□□□ -1.63
PRPF40AO75400 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC4.85□□□□□ -1.63
PRPF40AO75400 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.85□□□□□ -1.63
PRPF40AO75400 AL356218.2-201ENST00000605264 187 ntBASIC4.85□□□□□ -1.63
PRPF40AO75400 AC123912.5-201ENST00000605470 343 ntBASIC4.85□□□□□ -1.63
PRPF40AO75400 HMGB1P50-201ENST00000605814 607 ntBASIC4.85□□□□□ -1.63
PRPF40AO75400 AC103858.2-201ENST00000621471 543 ntBASIC4.85□□□□□ -1.63
PRPF40AO75400 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.85□□□□□ -1.63
PRPF40AO75400 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PRPF40AO75400 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.85□□□□□ -1.63
PRPF40AO75400 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.85□□□□□ -1.63
PRPF40AO75400 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PRPF40AO75400 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.85□□□□□ -1.63
PRPF40AO75400 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
PRPF40AO75400 AC007785.2-201ENST00000598627 1916 ntBASIC4.84□□□□□ -1.63
PRPF40AO75400 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.84□□□□□ -1.63
PRPF40AO75400 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PRPF40AO75400 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PRPF40AO75400 RNU6-50P-201ENST00000362356 103 ntBASIC4.84□□□□□ -1.63
PRPF40AO75400 AL030996.1-201ENST00000411430 235 ntBASIC4.84□□□□□ -1.63
PRPF40AO75400 ELOCP19-201ENST00000411919 318 ntBASIC4.84□□□□□ -1.63
PRPF40AO75400 SYF2P2-201ENST00000417620 583 ntBASIC4.84□□□□□ -1.63
PRPF40AO75400 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.84□□□□□ -1.63
PRPF40AO75400 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC4.84□□□□□ -1.63
PRPF40AO75400 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC4.84□□□□□ -1.63
PRPF40AO75400 MYL8P-204ENST00000431574 518 ntBASIC4.84□□□□□ -1.63
PRPF40AO75400 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.84□□□□□ -1.63
PRPF40AO75400 DAP3P1-201ENST00000441522 278 ntBASIC4.84□□□□□ -1.63
PRPF40AO75400 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.84□□□□□ -1.63
PRPF40AO75400 AL645939.1-201ENST00000453429 797 ntBASIC4.84□□□□□ -1.63
PRPF40AO75400 AC008571.1-201ENST00000467232 300 ntBASIC4.84□□□□□ -1.63
PRPF40AO75400 RPL21P126-201ENST00000470049 478 ntBASIC4.84□□□□□ -1.63
PRPF40AO75400 RPL21P13-201ENST00000488305 481 ntBASIC4.84□□□□□ -1.63
PRPF40AO75400 RPL31P61-201ENST00000496160 376 ntBASIC4.84□□□□□ -1.63
PRPF40AO75400 SNORA25.10-201ENST00000515926 124 ntBASIC4.84□□□□□ -1.63
PRPF40AO75400 AC025755.1-201ENST00000521306 278 ntBASIC4.84□□□□□ -1.63
PRPF40AO75400 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.84□□□□□ -1.63
PRPF40AO75400 AC107016.1-201ENST00000550463 337 ntBASIC4.84□□□□□ -1.63
PRPF40AO75400 AL591516.1-201ENST00000611326 274 ntBASIC4.84□□□□□ -1.63
PRPF40AO75400 AC006157.1-201ENST00000611750 366 ntBASIC4.84□□□□□ -1.63
PRPF40AO75400 AL773545.4-201ENST00000637262 310 ntBASIC4.84□□□□□ -1.63
PRPF40AO75400 AL513478.4-201ENST00000641636 310 ntBASIC4.84□□□□□ -1.63
PRPF40AO75400 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PRPF40AO75400 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.64
PRPF40AO75400 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
PRPF40AO75400 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.64
PRPF40AO75400 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.84□□□□□ -1.64
PRPF40AO75400 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.83□□□□□ -1.64
PRPF40AO75400 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
PRPF40AO75400 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PRPF40AO75400 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PRPF40AO75400 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PRPF40AO75400 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
PRPF40AO75400 Y_RNA.144-201ENST00000363521 113 ntBASIC4.83□□□□□ -1.64
PRPF40AO75400 Y_RNA.364-201ENST00000365532 101 ntBASIC4.83□□□□□ -1.64
PRPF40AO75400 AL022722.2-201ENST00000402519 180 ntBASIC4.83□□□□□ -1.64
PRPF40AO75400 RNU2-68P-201ENST00000410878 191 ntBASIC4.83□□□□□ -1.64
PRPF40AO75400 Y_RNA.623-201ENST00000411128 95 ntBASIC4.83□□□□□ -1.64
PRPF40AO75400 AL592148.1-201ENST00000413568 445 ntBASIC4.83□□□□□ -1.64
PRPF40AO75400 TMSB10P2-201ENST00000416049 131 ntBASIC4.83□□□□□ -1.64
PRPF40AO75400 AL356387.2-201ENST00000422272 243 ntBASIC4.83□□□□□ -1.64
PRPF40AO75400 MTCYBP10-201ENST00000424905 650 ntBASIC4.83□□□□□ -1.64
PRPF40AO75400 AC007560.1-201ENST00000426912 237 ntBASIC4.83□□□□□ -1.64
PRPF40AO75400 AL627311.1-201ENST00000431514 115 ntBASIC4.83□□□□□ -1.64
PRPF40AO75400 AL160004.2-201ENST00000432935 350 ntBASIC4.83□□□□□ -1.64
PRPF40AO75400 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC4.83□□□□□ -1.64
PRPF40AO75400 TPT1P12-201ENST00000448968 492 ntBASIC4.83□□□□□ -1.64
PRPF40AO75400 AL031274.1-201ENST00000450334 232 ntBASIC4.83□□□□□ -1.64
PRPF40AO75400 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC4.83□□□□□ -1.64
PRPF40AO75400 RPL23AP81-201ENST00000455252 467 ntBASIC4.83□□□□□ -1.64
PRPF40AO75400 AC069499.1-201ENST00000489433 509 ntBASIC4.83□□□□□ -1.64
PRPF40AO75400 HMGN1P11-201ENST00000508668 303 ntBASIC4.83□□□□□ -1.64
PRPF40AO75400 AC108043.1-201ENST00000512696 574 ntBASIC4.83□□□□□ -1.64
PRPF40AO75400 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.83□□□□□ -1.64
PRPF40AO75400 RNU6-1046P-201ENST00000516538 107 ntBASIC4.83□□□□□ -1.64
PRPF40AO75400 RNU6-699P-201ENST00000517081 110 ntBASIC4.83□□□□□ -1.64
PRPF40AO75400 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PRPF40AO75400 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.83□□□□□ -1.64
PRPF40AO75400 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.83□□□□□ -1.64
PRPF40AO75400 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC4.83□□□□□ -1.64
PRPF40AO75400 AC007485.1-201ENST00000616755 206 ntBASIC4.83□□□□□ -1.64
PRPF40AO75400 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
PRPF40AO75400 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PRPF40AO75400 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.83□□□□□ -1.64
PRPF40AO75400 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PRPF40AO75400 AL359693.1-201ENST00000614959 2407 ntBASIC4.83□□□□□ -1.64
PRPF40AO75400 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
PRPF40AO75400 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.82□□□□□ -1.64
PRPF40AO75400 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PRPF40AO75400 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PRPF40AO75400 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PRPF40AO75400 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PRPF40AO75400 RNU6-37P-201ENST00000362692 107 ntBASIC4.82□□□□□ -1.64
PRPF40AO75400 RNU6-11P-201ENST00000364234 107 ntBASIC4.82□□□□□ -1.64
PRPF40AO75400 SNORD14B-201ENST00000364533 90 ntBASIC4.82□□□□□ -1.64
PRPF40AO75400 RNU6-7-201ENST00000364784 107 ntBASIC4.82□□□□□ -1.64
PRPF40AO75400 RNU6-384P-201ENST00000364900 104 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms