Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.18□□□□□ -2.22
PFDN1O60925 CYP2C59P-201ENST00000457790 269 ntBASIC1.18□□□□□ -2.22
PFDN1O60925 RPL36AP48-201ENST00000485521 314 ntBASIC1.18□□□□□ -2.22
PFDN1O60925 AC011005.2-201ENST00000487324 359 ntBASIC1.18□□□□□ -2.22
PFDN1O60925 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC1.18□□□□□ -2.22
PFDN1O60925 RNA5SP445-201ENST00000515889 115 ntBASIC1.18□□□□□ -2.22
PFDN1O60925 AC103833.1-201ENST00000517442 172 ntBASIC1.18□□□□□ -2.22
PFDN1O60925 AC090821.2-201ENST00000523552 176 ntBASIC1.18□□□□□ -2.22
PFDN1O60925 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC1.18□□□□□ -2.22
PFDN1O60925 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC1.18□□□□□ -2.22
PFDN1O60925 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.18□□□□□ -2.22
PFDN1O60925 AC023825.1-201ENST00000566704 1030 ntBASIC1.18□□□□□ -2.22
PFDN1O60925 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.18□□□□□ -2.22
PFDN1O60925 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.18□□□□□ -2.22
PFDN1O60925 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC1.18□□□□□ -2.22
PFDN1O60925 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.18□□□□□ -2.22
PFDN1O60925 AC132825.7-201ENST00000638744 335 ntBASIC1.18□□□□□ -2.22
PFDN1O60925 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
PFDN1O60925 SNORD56.4-201ENST00000363883 71 ntBASIC1.17□□□□□ -2.22
PFDN1O60925 MIR583-201ENST00000384846 75 ntBASIC1.17□□□□□ -2.22
PFDN1O60925 MIR597-201ENST00000384968 97 ntBASIC1.17□□□□□ -2.22
PFDN1O60925 MIR30A-201ENST00000385092 71 ntBASIC1.17□□□□□ -2.22
PFDN1O60925 MIR561-201ENST00000385216 97 ntBASIC1.17□□□□□ -2.22
PFDN1O60925 MTCO2P31-201ENST00000402702 684 ntBASIC1.17□□□□□ -2.22
PFDN1O60925 CCNG1P1-201ENST00000406783 885 ntBASIC1.17□□□□□ -2.22
PFDN1O60925 AC009310.1-201ENST00000414414 451 ntBASIC1.17□□□□□ -2.22
PFDN1O60925 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC1.17□□□□□ -2.22
PFDN1O60925 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC1.17□□□□□ -2.22
PFDN1O60925 OFD1P2Y-201ENST00000421895 1149 ntBASIC1.17□□□□□ -2.22
PFDN1O60925 EIF4EP2-201ENST00000422816 654 ntBASIC1.17□□□□□ -2.22
PFDN1O60925 PTGES3P4-201ENST00000426243 356 ntBASIC1.17□□□□□ -2.22
PFDN1O60925 AL451062.2-201ENST00000427515 271 ntBASIC1.17□□□□□ -2.22
PFDN1O60925 MTCYBP32-201ENST00000427945 1084 ntBASIC1.17□□□□□ -2.22
PFDN1O60925 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC1.17□□□□□ -2.22
PFDN1O60925 MTCO1P53-201ENST00000441633 699 ntBASIC1.17□□□□□ -2.22
PFDN1O60925 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.17□□□□□ -2.22
PFDN1O60925 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
PFDN1O60925 AC118282.2-201ENST00000508739 374 ntBASIC1.17□□□□□ -2.22
PFDN1O60925 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.17□□□□□ -2.22
PFDN1O60925 CYCSP27-201ENST00000527643 293 ntBASIC1.17□□□□□ -2.22
PFDN1O60925 AC026271.5-201ENST00000577873 130 ntBASIC1.17□□□□□ -2.22
PFDN1O60925 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.17□□□□□ -2.22
PFDN1O60925 NDUFA8P1-201ENST00000605525 367 ntBASIC1.17□□□□□ -2.22
PFDN1O60925 AF129408.1-201ENST00000608767 431 ntBASIC1.17□□□□□ -2.22
PFDN1O60925 AC021755.4-201ENST00000616620 456 ntBASIC1.17□□□□□ -2.22
PFDN1O60925 AC084824.4-201ENST00000620106 731 ntBASIC1.17□□□□□ -2.22
PFDN1O60925 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.17□□□□□ -2.22
PFDN1O60925 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
PFDN1O60925 SNORA62.1-201ENST00000364287 154 ntBASIC1.16□□□□□ -2.22
PFDN1O60925 MIR518D-201ENST00000385014 87 ntBASIC1.16□□□□□ -2.22
PFDN1O60925 SNORA40.19-201ENST00000390846 128 ntBASIC1.16□□□□□ -2.22
PFDN1O60925 RNU6-575P-201ENST00000411326 105 ntBASIC1.16□□□□□ -2.22
PFDN1O60925 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC1.16□□□□□ -2.22
PFDN1O60925 TOMM22P2-201ENST00000430735 237 ntBASIC1.16□□□□□ -2.22
PFDN1O60925 RPL7P54-201ENST00000438336 674 ntBASIC1.16□□□□□ -2.22
PFDN1O60925 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC1.16□□□□□ -2.22
PFDN1O60925 COX6CP18-201ENST00000448769 222 ntBASIC1.16□□□□□ -2.22
PFDN1O60925 AMD1P1-201ENST00000457220 922 ntBASIC1.16□□□□□ -2.22
PFDN1O60925 AC006512.1-201ENST00000468816 291 ntBASIC1.16□□□□□ -2.22
PFDN1O60925 AL160314.1-201ENST00000490836 438 ntBASIC1.16□□□□□ -2.22
PFDN1O60925 AC104564.1-201ENST00000493028 407 ntBASIC1.16□□□□□ -2.22
PFDN1O60925 RPL22P13-201ENST00000493291 347 ntBASIC1.16□□□□□ -2.22
PFDN1O60925 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC1.16□□□□□ -2.22
PFDN1O60925 SNORA48.11-201ENST00000517015 89 ntBASIC1.16□□□□□ -2.22
PFDN1O60925 AP005660.1-201ENST00000522972 293 ntBASIC1.16□□□□□ -2.22
PFDN1O60925 AK6P1-201ENST00000540219 478 ntBASIC1.16□□□□□ -2.22
PFDN1O60925 NDUFA5P6-201ENST00000542110 379 ntBASIC1.16□□□□□ -2.22
PFDN1O60925 AC125611.1-201ENST00000549563 229 ntBASIC1.16□□□□□ -2.22
PFDN1O60925 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC1.16□□□□□ -2.22
PFDN1O60925 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.16□□□□□ -2.22
PFDN1O60925 AC233266.2-201ENST00000567067 528 ntBASIC1.16□□□□□ -2.22
PFDN1O60925 AC012213.3-201ENST00000577199 777 ntBASIC1.16□□□□□ -2.22
PFDN1O60925 AL359314.1-201ENST00000616913 261 ntBASIC1.16□□□□□ -2.22
PFDN1O60925 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
PFDN1O60925 RNU1-57P-201ENST00000384491 166 ntBASIC1.15□□□□□ -2.23
PFDN1O60925 RNU6-253P-201ENST00000384730 105 ntBASIC1.15□□□□□ -2.23
PFDN1O60925 MIR517C-201ENST00000385103 95 ntBASIC1.15□□□□□ -2.23
PFDN1O60925 RN7SKP223-201ENST00000410582 62 ntBASIC1.15□□□□□ -2.23
PFDN1O60925 RNA5SP501-201ENST00000410990 112 ntBASIC1.15□□□□□ -2.23
PFDN1O60925 RPL26P27-201ENST00000414397 437 ntBASIC1.15□□□□□ -2.23
PFDN1O60925 OR51A5P-201ENST00000415429 942 ntBASIC1.15□□□□□ -2.23
PFDN1O60925 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.15□□□□□ -2.23
PFDN1O60925 BTF3L4P3-201ENST00000418879 476 ntBASIC1.15□□□□□ -2.23
PFDN1O60925 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
PFDN1O60925 AL139415.2-201ENST00000431968 163 ntBASIC1.15□□□□□ -2.23
PFDN1O60925 MTND1P28-201ENST00000435623 950 ntBASIC1.15□□□□□ -2.23
PFDN1O60925 AC079448.1-201ENST00000449377 373 ntBASIC1.15□□□□□ -2.23
PFDN1O60925 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.15□□□□□ -2.23
PFDN1O60925 RNU7-140P-201ENST00000459546 60 ntBASIC1.15□□□□□ -2.23
PFDN1O60925 AC008481.1-201ENST00000463278 396 ntBASIC1.15□□□□□ -2.23
PFDN1O60925 AC112771.1-201ENST00000463581 102 ntBASIC1.15□□□□□ -2.23
PFDN1O60925 RPL30P9-201ENST00000465586 330 ntBASIC1.15□□□□□ -2.23
PFDN1O60925 XACT-201ENST00000468762 497 ntTSL 5 BASIC1.15□□□□□ -2.23
PFDN1O60925 AC092902.1-201ENST00000486999 259 ntBASIC1.15□□□□□ -2.23
PFDN1O60925 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC1.15□□□□□ -2.23
PFDN1O60925 RNU6-581P-201ENST00000516214 105 ntBASIC1.15□□□□□ -2.23
PFDN1O60925 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.15□□□□□ -2.23
PFDN1O60925 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.15□□□□□ -2.23
PFDN1O60925 AC073544.2-201ENST00000601155 540 ntBASIC1.15□□□□□ -2.23
PFDN1O60925 AL670379.6-201ENST00000603753 252 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms