Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.92□□□□□ -2.1
SHOX2O60902 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.92□□□□□ -2.1
SHOX2O60902 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.92□□□□□ -2.1
SHOX2O60902 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.92□□□□□ -2.1
SHOX2O60902 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.92□□□□□ -2.1
SHOX2O60902 PSPHP1-201ENST00000450062 261 ntBASIC1.92□□□□□ -2.1
SHOX2O60902 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.92□□□□□ -2.1
SHOX2O60902 RPL18AP17-201ENST00000455326 198 ntBASIC1.92□□□□□ -2.1
SHOX2O60902 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.92□□□□□ -2.1
SHOX2O60902 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC1.92□□□□□ -2.1
SHOX2O60902 MTAPP1-201ENST00000489154 819 ntBASIC1.92□□□□□ -2.1
SHOX2O60902 CYCSP26-201ENST00000534107 320 ntBASIC1.92□□□□□ -2.1
SHOX2O60902 OR6C7P-201ENST00000547875 934 ntBASIC1.92□□□□□ -2.1
SHOX2O60902 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.92□□□□□ -2.1
SHOX2O60902 SNORA4-201ENST00000584302 138 ntBASIC1.92□□□□□ -2.1
SHOX2O60902 AL391813.1-201ENST00000603098 260 ntBASIC1.92□□□□□ -2.1
SHOX2O60902 SNRPGP19-201ENST00000603826 189 ntBASIC1.92□□□□□ -2.1
SHOX2O60902 AL139344.1-201ENST00000605228 195 ntBASIC1.92□□□□□ -2.1
SHOX2O60902 AC099785.1-201ENST00000605697 437 ntBASIC1.92□□□□□ -2.1
SHOX2O60902 AL021997.1-201ENST00000605757 193 ntBASIC1.92□□□□□ -2.1
SHOX2O60902 AL021368.1-201ENST00000607490 540 ntBASIC1.92□□□□□ -2.1
SHOX2O60902 AC010378.1-201ENST00000619270 362 ntBASIC1.92□□□□□ -2.1
SHOX2O60902 AP003485.1-201ENST00000625093 753 ntBASIC1.92□□□□□ -2.1
SHOX2O60902 AC116618.1-201ENST00000634617 774 ntBASIC1.92□□□□□ -2.1
SHOX2O60902 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
SHOX2O60902 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
SHOX2O60902 AL023284.1-201ENST00000403956 276 ntBASIC1.91□□□□□ -2.1
SHOX2O60902 SNORA11.4-201ENST00000408823 129 ntBASIC1.91□□□□□ -2.1
SHOX2O60902 AL161449.1-201ENST00000414531 1199 ntBASIC1.91□□□□□ -2.1
SHOX2O60902 CYCSP48-201ENST00000417124 323 ntBASIC1.91□□□□□ -2.1
SHOX2O60902 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.91□□□□□ -2.1
SHOX2O60902 ZNF736P7Y-201ENST00000425158 820 ntBASIC1.91□□□□□ -2.1
SHOX2O60902 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.91□□□□□ -2.1
SHOX2O60902 SNRPEP9-201ENST00000436794 238 ntBASIC1.91□□□□□ -2.1
SHOX2O60902 AC017099.1-201ENST00000448261 1028 ntBASIC1.91□□□□□ -2.1
SHOX2O60902 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.91□□□□□ -2.1
SHOX2O60902 BX322784.1-201ENST00000455793 1077 ntBASIC1.91□□□□□ -2.1
SHOX2O60902 AC013267.1-201ENST00000458227 267 ntBASIC1.91□□□□□ -2.1
SHOX2O60902 RPL30P9-201ENST00000465586 330 ntBASIC1.91□□□□□ -2.1
SHOX2O60902 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC1.91□□□□□ -2.1
SHOX2O60902 AC104563.1-201ENST00000476147 376 ntBASIC1.91□□□□□ -2.1
SHOX2O60902 AC026801.1-201ENST00000497178 464 ntBASIC1.91□□□□□ -2.1
SHOX2O60902 AC116337.1-201ENST00000509680 687 ntBASIC1.91□□□□□ -2.1
SHOX2O60902 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.91□□□□□ -2.1
SHOX2O60902 MTCO3P27-201ENST00000514397 196 ntBASIC1.91□□□□□ -2.1
SHOX2O60902 SNORD19.2-201ENST00000516978 73 ntBASIC1.91□□□□□ -2.1
SHOX2O60902 RNA5SP290-201ENST00000517133 127 ntBASIC1.91□□□□□ -2.1
SHOX2O60902 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC1.91□□□□□ -2.1
SHOX2O60902 AP003497.1-201ENST00000528472 562 ntBASIC1.91□□□□□ -2.1
SHOX2O60902 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.91□□□□□ -2.1
SHOX2O60902 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.91□□□□□ -2.1
SHOX2O60902 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.91□□□□□ -2.1
SHOX2O60902 MIR6779-201ENST00000617283 64 ntBASIC1.91□□□□□ -2.1
SHOX2O60902 AL356266.1-201ENST00000623311 483 ntBASIC1.91□□□□□ -2.1
SHOX2O60902 AC019226.1-201ENST00000625666 515 ntBASIC1.91□□□□□ -2.1
SHOX2O60902 MIR3199-2-201ENST00000636243 86 ntBASIC1.91□□□□□ -2.1
SHOX2O60902 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
SHOX2O60902 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.91□□□□□ -2.1
SHOX2O60902 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.1
SHOX2O60902 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
SHOX2O60902 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.9□□□□□ -2.11
SHOX2O60902 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.9□□□□□ -2.11
SHOX2O60902 RNU1-39P-201ENST00000383897 165 ntBASIC1.9□□□□□ -2.11
SHOX2O60902 RNU6-1207P-201ENST00000384343 107 ntBASIC1.9□□□□□ -2.11
SHOX2O60902 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
SHOX2O60902 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC1.9□□□□□ -2.11
SHOX2O60902 C1DP1-201ENST00000426049 402 ntBASIC1.9□□□□□ -2.11
SHOX2O60902 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.9□□□□□ -2.11
SHOX2O60902 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.9□□□□□ -2.11
SHOX2O60902 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
SHOX2O60902 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.9□□□□□ -2.11
SHOX2O60902 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.9□□□□□ -2.11
SHOX2O60902 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.9□□□□□ -2.11
SHOX2O60902 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.9□□□□□ -2.11
SHOX2O60902 AC092902.1-201ENST00000486999 259 ntBASIC1.9□□□□□ -2.11
SHOX2O60902 RPS27AP10-201ENST00000496103 208 ntBASIC1.9□□□□□ -2.11
SHOX2O60902 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC1.9□□□□□ -2.11
SHOX2O60902 HMGB3P17-201ENST00000504195 649 ntBASIC1.9□□□□□ -2.11
SHOX2O60902 LTV1P1-201ENST00000510683 1237 ntBASIC1.9□□□□□ -2.11
SHOX2O60902 AC108078.2-201ENST00000510750 236 ntBASIC1.9□□□□□ -2.11
SHOX2O60902 MIR892C-201ENST00000516410 77 ntBASIC1.9□□□□□ -2.11
SHOX2O60902 RNU7-193P-201ENST00000516723 65 ntBASIC1.9□□□□□ -2.11
SHOX2O60902 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.9□□□□□ -2.11
SHOX2O60902 MEG8-218ENST00000556720 456 ntTSL 3 BASIC1.9□□□□□ -2.11
SHOX2O60902 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC1.9□□□□□ -2.11
SHOX2O60902 AC008749.1-201ENST00000597650 306 ntBASIC1.9□□□□□ -2.11
SHOX2O60902 AC008121.1-201ENST00000603244 268 ntBASIC1.9□□□□□ -2.11
SHOX2O60902 AC069294.1-201ENST00000608397 350 ntBASIC1.9□□□□□ -2.11
SHOX2O60902 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.9□□□□□ -2.11
SHOX2O60902 Y_RNA.783-201ENST00000613546 102 ntBASIC1.9□□□□□ -2.11
SHOX2O60902 AC018926.1-201ENST00000616335 435 ntBASIC1.9□□□□□ -2.11
SHOX2O60902 MIR6873-201ENST00000622788 63 ntBASIC1.9□□□□□ -2.11
SHOX2O60902 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.9□□□□□ -2.11
SHOX2O60902 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
SHOX2O60902 AC027514.1-201ENST00000588561 1603 ntBASIC1.9□□□□□ -2.11
SHOX2O60902 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.9□□□□□ -2.11
SHOX2O60902 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
SHOX2O60902 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
SHOX2O60902 SNORA16.1-201ENST00000364597 132 ntBASIC1.89□□□□□ -2.11
SHOX2O60902 RNU6-343P-201ENST00000364709 104 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms