Protein–RNA interactions for Protein: O60506

SYNCRIP, Heterogeneous nuclear ribonucleoprotein Q, humanhuman

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIPO60506 RNU1-143P-201ENST00000516296 146 ntBASIC3.17□□□□□ -1.9
SYNCRIPO60506 SCARNA20.6-201ENST00000517251 106 ntBASIC3.17□□□□□ -1.9
SYNCRIPO60506 AC022616.3-201ENST00000523940 148 ntBASIC3.17□□□□□ -1.9
SYNCRIPO60506 ATP5F1P5-201ENST00000526403 760 ntBASIC3.17□□□□□ -1.9
SYNCRIPO60506 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SYNCRIPO60506 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.17□□□□□ -1.9
SYNCRIPO60506 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.17□□□□□ -1.9
SYNCRIPO60506 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.17□□□□□ -1.9
SYNCRIPO60506 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.17□□□□□ -1.9
SYNCRIPO60506 MIR3945-201ENST00000581853 98 ntBASIC3.17□□□□□ -1.9
SYNCRIPO60506 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.17□□□□□ -1.9
SYNCRIPO60506 U1.23-201ENST00000610293 146 ntBASIC3.17□□□□□ -1.9
SYNCRIPO60506 AC004696.1-201ENST00000614345 607 ntBASIC3.17□□□□□ -1.9
SYNCRIPO60506 RNU1-68P-201ENST00000615382 146 ntBASIC3.17□□□□□ -1.9
SYNCRIPO60506 ATP5A1P2-202ENST00000616464 443 ntBASIC3.17□□□□□ -1.9
SYNCRIPO60506 U1.39-201ENST00000621562 146 ntBASIC3.17□□□□□ -1.9
SYNCRIPO60506 AC091903.1-201ENST00000624322 454 ntBASIC3.17□□□□□ -1.9
SYNCRIPO60506 AC068880.5-201ENST00000624331 290 ntBASIC3.17□□□□□ -1.9
SYNCRIPO60506 AL137790.1-201ENST00000634283 177 ntBASIC3.17□□□□□ -1.9
SYNCRIPO60506 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.17□□□□□ -1.9
SYNCRIPO60506 CR848007.1-201ENST00000442354 1699 ntBASIC3.17□□□□□ -1.9
SYNCRIPO60506 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SYNCRIPO60506 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SYNCRIPO60506 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SYNCRIPO60506 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.16□□□□□ -1.9
SYNCRIPO60506 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.16□□□□□ -1.9
SYNCRIPO60506 RNU1-105P-201ENST00000363470 161 ntBASIC3.16□□□□□ -1.9
SYNCRIPO60506 DYNLT3P1-201ENST00000378574 347 ntBASIC3.16□□□□□ -1.9
SYNCRIPO60506 AC127391.1-201ENST00000411737 98 ntBASIC3.16□□□□□ -1.9
SYNCRIPO60506 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.16□□□□□ -1.9
SYNCRIPO60506 AL451054.2-201ENST00000420896 202 ntBASIC3.16□□□□□ -1.9
SYNCRIPO60506 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.16□□□□□ -1.9
SYNCRIPO60506 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.16□□□□□ -1.9
SYNCRIPO60506 MTCO2P11-201ENST00000431069 680 ntBASIC3.16□□□□□ -1.9
SYNCRIPO60506 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.16□□□□□ -1.9
SYNCRIPO60506 DDX3P2-201ENST00000446138 111 ntBASIC3.16□□□□□ -1.9
SYNCRIPO60506 GAPDHP27-201ENST00000447427 1020 ntBASIC3.16□□□□□ -1.9
SYNCRIPO60506 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.16□□□□□ -1.9
SYNCRIPO60506 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.16□□□□□ -1.9
SYNCRIPO60506 SRRM1P2-201ENST00000464531 1192 ntBASIC3.16□□□□□ -1.9
SYNCRIPO60506 RPS20P22-201ENST00000473700 357 ntBASIC3.16□□□□□ -1.9
SYNCRIPO60506 RN7SKP282-201ENST00000516824 299 ntBASIC3.16□□□□□ -1.9
SYNCRIPO60506 RNU6-64P-201ENST00000517119 105 ntBASIC3.16□□□□□ -1.9
SYNCRIPO60506 AC090572.1-201ENST00000519251 160 ntBASIC3.16□□□□□ -1.9
SYNCRIPO60506 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.16□□□□□ -1.9
SYNCRIPO60506 AC016957.1-201ENST00000534895 309 ntBASIC3.16□□□□□ -1.9
SYNCRIPO60506 AC123904.3-201ENST00000547218 814 ntBASIC3.16□□□□□ -1.9
SYNCRIPO60506 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.16□□□□□ -1.9
SYNCRIPO60506 AC087883.1-201ENST00000551882 391 ntBASIC3.16□□□□□ -1.9
SYNCRIPO60506 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.16□□□□□ -1.9
SYNCRIPO60506 AC034105.3-201ENST00000565294 442 ntBASIC3.16□□□□□ -1.9
SYNCRIPO60506 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.16□□□□□ -1.9
SYNCRIPO60506 RPL23AP78-201ENST00000599928 470 ntBASIC3.16□□□□□ -1.9
SYNCRIPO60506 AC008277.2-201ENST00000605196 797 ntBASIC3.16□□□□□ -1.9
SYNCRIPO60506 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.16□□□□□ -1.9
SYNCRIPO60506 AC013412.1-201ENST00000610687 192 ntBASIC3.16□□□□□ -1.9
SYNCRIPO60506 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.16□□□□□ -1.9
SYNCRIPO60506 AL133173.2-201ENST00000614270 90 ntBASIC3.16□□□□□ -1.9
SYNCRIPO60506 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.16□□□□□ -1.9
SYNCRIPO60506 AC110079.1-202ENST00000635213 138 ntBASIC3.16□□□□□ -1.9
SYNCRIPO60506 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
SYNCRIPO60506 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.16□□□□□ -1.9
SYNCRIPO60506 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SYNCRIPO60506 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SYNCRIPO60506 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
SYNCRIPO60506 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.15□□□□□ -1.9
SYNCRIPO60506 AC008669.1-201ENST00000565823 2178 ntBASIC3.15□□□□□ -1.9
SYNCRIPO60506 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
SYNCRIPO60506 RNU6-1284P-201ENST00000363701 100 ntBASIC3.15□□□□□ -1.91
SYNCRIPO60506 RNU6-108P-201ENST00000365558 107 ntBASIC3.15□□□□□ -1.91
SYNCRIPO60506 SNORA20.2-201ENST00000383922 131 ntBASIC3.15□□□□□ -1.91
SYNCRIPO60506 SNORA44-201ENST00000384584 132 ntBASIC3.15□□□□□ -1.91
SYNCRIPO60506 RNA5SP354-201ENST00000391247 136 ntBASIC3.15□□□□□ -1.91
SYNCRIPO60506 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SYNCRIPO60506 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.15□□□□□ -1.91
SYNCRIPO60506 HMGN2P30-201ENST00000423237 256 ntBASIC3.15□□□□□ -1.91
SYNCRIPO60506 RPL31P35-201ENST00000431058 377 ntBASIC3.15□□□□□ -1.91
SYNCRIPO60506 AC119618.1-201ENST00000434191 222 ntBASIC3.15□□□□□ -1.91
SYNCRIPO60506 USP9YP28-201ENST00000435142 589 ntBASIC3.15□□□□□ -1.91
SYNCRIPO60506 MTND1P4-201ENST00000435196 415 ntBASIC3.15□□□□□ -1.91
SYNCRIPO60506 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC3.15□□□□□ -1.91
SYNCRIPO60506 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.15□□□□□ -1.91
SYNCRIPO60506 AC093899.1-201ENST00000457984 376 ntBASIC3.15□□□□□ -1.91
SYNCRIPO60506 AC010631.1-201ENST00000474150 156 ntBASIC3.15□□□□□ -1.91
SYNCRIPO60506 AC126182.1-201ENST00000478134 357 ntBASIC3.15□□□□□ -1.91
SYNCRIPO60506 AC096576.1-201ENST00000489014 359 ntBASIC3.15□□□□□ -1.91
SYNCRIPO60506 RN7SL283P-201ENST00000489055 303 ntBASIC3.15□□□□□ -1.91
SYNCRIPO60506 AC097462.2-201ENST00000504623 481 ntBASIC3.15□□□□□ -1.91
SYNCRIPO60506 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.15□□□□□ -1.91
SYNCRIPO60506 AC011979.2-201ENST00000527568 352 ntBASIC3.15□□□□□ -1.91
SYNCRIPO60506 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SYNCRIPO60506 AC093012.1-202ENST00000549403 582 ntBASIC3.15□□□□□ -1.91
SYNCRIPO60506 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.15□□□□□ -1.91
SYNCRIPO60506 ZNF519P2-201ENST00000557032 169 ntBASIC3.15□□□□□ -1.91
SYNCRIPO60506 TPRKBP2-201ENST00000565969 475 ntBASIC3.15□□□□□ -1.91
SYNCRIPO60506 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.15□□□□□ -1.91
SYNCRIPO60506 AL136363.1-201ENST00000605349 337 ntBASIC3.15□□□□□ -1.91
SYNCRIPO60506 AL591516.1-201ENST00000611326 274 ntBASIC3.15□□□□□ -1.91
SYNCRIPO60506 MIR7106-201ENST00000612419 65 ntBASIC3.15□□□□□ -1.91
SYNCRIPO60506 U4.5-201ENST00000617137 123 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 144.6 ms