Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.96□□□□□ -1.94
PRKNO60260 AC105417.1-201ENST00000514691 285 ntBASIC2.96□□□□□ -1.94
PRKNO60260 SNORA74D-201ENST00000516404 141 ntBASIC2.96□□□□□ -1.94
PRKNO60260 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.96□□□□□ -1.94
PRKNO60260 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.96□□□□□ -1.94
PRKNO60260 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.96□□□□□ -1.94
PRKNO60260 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.96□□□□□ -1.94
PRKNO60260 BNIP3P30-201ENST00000601184 574 ntBASIC2.96□□□□□ -1.94
PRKNO60260 NRBF2P5-201ENST00000603087 788 ntBASIC2.96□□□□□ -1.94
PRKNO60260 RMST_8.1-201ENST00000610287 165 ntBASIC2.96□□□□□ -1.94
PRKNO60260 uc_338.25-201ENST00000613756 156 ntBASIC2.96□□□□□ -1.94
PRKNO60260 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.96□□□□□ -1.94
PRKNO60260 AC010338.1-201ENST00000621823 717 ntBASIC2.96□□□□□ -1.94
PRKNO60260 AC024614.3-201ENST00000637860 256 ntBASIC2.96□□□□□ -1.94
PRKNO60260 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.96□□□□□ -1.94
PRKNO60260 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
PRKNO60260 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
PRKNO60260 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.96□□□□□ -1.94
PRKNO60260 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
PRKNO60260 API5P2-201ENST00000397055 1498 ntBASIC2.96□□□□□ -1.94
PRKNO60260 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.94
PRKNO60260 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC2.96□□□□□ -1.94
PRKNO60260 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
PRKNO60260 AC007256.1-201ENST00000392253 2765 ntBASIC2.95□□□□□ -1.94
PRKNO60260 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
PRKNO60260 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
PRKNO60260 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.95□□□□□ -1.94
PRKNO60260 AL136164.4-201ENST00000625013 2135 ntBASIC2.95□□□□□ -1.94
PRKNO60260 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.95□□□□□ -1.94
PRKNO60260 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC2.95□□□□□ -1.94
PRKNO60260 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
PRKNO60260 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
PRKNO60260 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
PRKNO60260 RPL7P26-201ENST00000333817 754 ntBASIC2.95□□□□□ -1.94
PRKNO60260 SNORD115-7-201ENST00000365306 82 ntBASIC2.95□□□□□ -1.94
PRKNO60260 Y_RNA.576-201ENST00000384781 102 ntBASIC2.95□□□□□ -1.94
PRKNO60260 MIR483-201ENST00000385070 76 ntBASIC2.95□□□□□ -1.94
PRKNO60260 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
PRKNO60260 RNU6-876P-201ENST00000391295 104 ntBASIC2.95□□□□□ -1.94
PRKNO60260 AL354719.1-201ENST00000406535 843 ntBASIC2.95□□□□□ -1.94
PRKNO60260 RNU4-47P-201ENST00000410876 114 ntBASIC2.95□□□□□ -1.94
PRKNO60260 RPL30P16-201ENST00000419341 429 ntBASIC2.95□□□□□ -1.94
PRKNO60260 AL451054.2-201ENST00000420896 202 ntBASIC2.95□□□□□ -1.94
PRKNO60260 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.95□□□□□ -1.94
PRKNO60260 AL353678.1-201ENST00000422735 741 ntBASIC2.95□□□□□ -1.94
PRKNO60260 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.95□□□□□ -1.94
PRKNO60260 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.95□□□□□ -1.94
PRKNO60260 TXNP1-201ENST00000441872 371 ntBASIC2.95□□□□□ -1.94
PRKNO60260 AL671855.1-201ENST00000446875 1203 ntBASIC2.95□□□□□ -1.94
PRKNO60260 RPS20P20-201ENST00000460498 340 ntBASIC2.95□□□□□ -1.94
PRKNO60260 RPL23AP14-201ENST00000468281 468 ntBASIC2.95□□□□□ -1.94
PRKNO60260 RPS29P25-201ENST00000481709 171 ntBASIC2.95□□□□□ -1.94
PRKNO60260 AC006445.1-201ENST00000491925 405 ntBASIC2.95□□□□□ -1.94
PRKNO60260 AC074344.1-201ENST00000512823 224 ntBASIC2.95□□□□□ -1.94
PRKNO60260 RNU6-358P-201ENST00000516564 75 ntBASIC2.95□□□□□ -1.94
PRKNO60260 RN7SKP219-201ENST00000516825 296 ntBASIC2.95□□□□□ -1.94
PRKNO60260 RN7SKP258-201ENST00000517151 304 ntBASIC2.95□□□□□ -1.94
PRKNO60260 RN7SKP289-201ENST00000517244 295 ntBASIC2.95□□□□□ -1.94
PRKNO60260 SCARNA20.6-201ENST00000517251 106 ntBASIC2.95□□□□□ -1.94
PRKNO60260 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.95□□□□□ -1.94
PRKNO60260 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.95□□□□□ -1.94
PRKNO60260 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.95□□□□□ -1.94
PRKNO60260 RPL23AP84-201ENST00000571193 464 ntBASIC2.95□□□□□ -1.94
PRKNO60260 AL158032.1-201ENST00000605401 106 ntBASIC2.95□□□□□ -1.94
PRKNO60260 RMST_3.1-201ENST00000611651 109 ntBASIC2.95□□□□□ -1.94
PRKNO60260 PLCE1P1-201ENST00000622094 305 ntBASIC2.95□□□□□ -1.94
PRKNO60260 AC007998.5-201ENST00000622938 237 ntBASIC2.95□□□□□ -1.94
PRKNO60260 AC011155.2-201ENST00000623202 216 ntBASIC2.95□□□□□ -1.94
PRKNO60260 AC018692.3-201ENST00000623929 123 ntBASIC2.95□□□□□ -1.94
PRKNO60260 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.95□□□□□ -1.94
PRKNO60260 CASC19-280ENST00000642102 1351 ntBASIC2.95□□□□□ -1.94
PRKNO60260 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
PRKNO60260 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.95□□□□□ -1.94
PRKNO60260 PWAR6-201ENST00000552334 4618 ntBASIC2.95□□□□□ -1.94
PRKNO60260 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
PRKNO60260 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.95□□□□□ -1.94
PRKNO60260 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.94□□□□□ -1.94
PRKNO60260 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
PRKNO60260 RNU6-1287P-201ENST00000362914 107 ntBASIC2.94□□□□□ -1.94
PRKNO60260 RNU6-288P-201ENST00000363690 104 ntBASIC2.94□□□□□ -1.94
PRKNO60260 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.94□□□□□ -1.94
PRKNO60260 RNU6-14P-201ENST00000384630 106 ntBASIC2.94□□□□□ -1.94
PRKNO60260 RNU6-1060P-201ENST00000384664 107 ntBASIC2.94□□□□□ -1.94
PRKNO60260 SNRPEP10-201ENST00000420249 274 ntBASIC2.94□□□□□ -1.94
PRKNO60260 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.94□□□□□ -1.94
PRKNO60260 RPL23AP69-201ENST00000431134 458 ntBASIC2.94□□□□□ -1.94
PRKNO60260 AL118520.1-201ENST00000450770 291 ntBASIC2.94□□□□□ -1.94
PRKNO60260 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.94□□□□□ -1.94
PRKNO60260 EIF4EP3-201ENST00000498782 656 ntBASIC2.94□□□□□ -1.94
PRKNO60260 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
PRKNO60260 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.94□□□□□ -1.94
PRKNO60260 RBBP4P6-201ENST00000508098 202 ntBASIC2.94□□□□□ -1.94
PRKNO60260 AC104806.1-201ENST00000508720 308 ntBASIC2.94□□□□□ -1.94
PRKNO60260 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.94□□□□□ -1.94
PRKNO60260 AL359273.1-201ENST00000510918 627 ntBASIC2.94□□□□□ -1.94
PRKNO60260 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.94□□□□□ -1.94
PRKNO60260 RN7SKP60-201ENST00000516985 239 ntBASIC2.94□□□□□ -1.94
PRKNO60260 NRON-201ENST00000517270 370 ntBASIC2.94□□□□□ -1.94
PRKNO60260 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.94□□□□□ -1.94
PRKNO60260 SUB1P1-201ENST00000524415 382 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms