Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.72□□□□□ -1.81
PEX1O43933 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.72□□□□□ -1.81
PEX1O43933 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
PEX1O43933 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PEX1O43933 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.72□□□□□ -1.81
PEX1O43933 SNORD35B-201ENST00000363660 87 ntBASIC3.72□□□□□ -1.81
PEX1O43933 SNORA33.2-201ENST00000365413 134 ntBASIC3.72□□□□□ -1.81
PEX1O43933 RNU6-308P-201ENST00000390957 107 ntBASIC3.72□□□□□ -1.81
PEX1O43933 RNU2-43P-201ENST00000410306 190 ntBASIC3.72□□□□□ -1.81
PEX1O43933 RN7SKP202-201ENST00000410439 330 ntBASIC3.72□□□□□ -1.81
PEX1O43933 AL691449.1-201ENST00000426570 421 ntBASIC3.72□□□□□ -1.81
PEX1O43933 AL669831.1-202ENST00000428504 417 ntBASIC3.72□□□□□ -1.81
PEX1O43933 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.72□□□□□ -1.81
PEX1O43933 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.72□□□□□ -1.81
PEX1O43933 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PEX1O43933 AC104058.1-201ENST00000448028 297 ntBASIC3.72□□□□□ -1.81
PEX1O43933 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PEX1O43933 AC090096.1-201ENST00000489168 390 ntBASIC3.72□□□□□ -1.81
PEX1O43933 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.72□□□□□ -1.81
PEX1O43933 HIGD1AP13-201ENST00000509878 289 ntBASIC3.72□□□□□ -1.81
PEX1O43933 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.72□□□□□ -1.81
PEX1O43933 Y_RNA.689-201ENST00000516589 107 ntBASIC3.72□□□□□ -1.81
PEX1O43933 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.72□□□□□ -1.81
PEX1O43933 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.72□□□□□ -1.81
PEX1O43933 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.72□□□□□ -1.81
PEX1O43933 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.72□□□□□ -1.81
PEX1O43933 AC034105.4-201ENST00000568304 277 ntBASIC3.72□□□□□ -1.81
PEX1O43933 AC120057.2-201ENST00000571520 271 ntBASIC3.72□□□□□ -1.81
PEX1O43933 AC138761.3-201ENST00000579993 334 ntBASIC3.72□□□□□ -1.81
PEX1O43933 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.72□□□□□ -1.81
PEX1O43933 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.72□□□□□ -1.81
PEX1O43933 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.72□□□□□ -1.81
PEX1O43933 AL138726.1-201ENST00000614873 333 ntBASIC3.72□□□□□ -1.81
PEX1O43933 MIR6500-201ENST00000622700 86 ntBASIC3.72□□□□□ -1.81
PEX1O43933 AC007998.5-201ENST00000622938 237 ntBASIC3.72□□□□□ -1.81
PEX1O43933 AC244517.12-201ENST00000623581 663 ntBASIC3.72□□□□□ -1.81
PEX1O43933 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PEX1O43933 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PEX1O43933 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PEX1O43933 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
PEX1O43933 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.72□□□□□ -1.81
PEX1O43933 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.71□□□□□ -1.81
PEX1O43933 AC091152.2-201ENST00000591628 2569 ntBASIC3.71□□□□□ -1.81
PEX1O43933 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
PEX1O43933 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.81
PEX1O43933 AL137003.2-201ENST00000606924 2538 ntBASIC3.71□□□□□ -1.82
PEX1O43933 ZNF519P1-201ENST00000449011 1626 ntBASIC3.71□□□□□ -1.82
PEX1O43933 Y_RNA.135-201ENST00000363439 95 ntBASIC3.71□□□□□ -1.82
PEX1O43933 RNU6-1188P-201ENST00000363795 107 ntBASIC3.71□□□□□ -1.82
PEX1O43933 RNU6-715P-201ENST00000365204 103 ntBASIC3.71□□□□□ -1.82
PEX1O43933 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
PEX1O43933 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PEX1O43933 SNORD116-11-201ENST00000383882 92 ntBASIC3.71□□□□□ -1.82
PEX1O43933 Y_RNA.445-201ENST00000384168 102 ntBASIC3.71□□□□□ -1.82
PEX1O43933 RNU6-1160P-201ENST00000384546 104 ntBASIC3.71□□□□□ -1.82
PEX1O43933 CISD1P1-201ENST00000393907 327 ntBASIC3.71□□□□□ -1.82
PEX1O43933 AL139039.1-201ENST00000401900 692 ntBASIC3.71□□□□□ -1.82
PEX1O43933 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PEX1O43933 PMCHL1-202ENST00000423102 261 ntBASIC3.71□□□□□ -1.82
PEX1O43933 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.71□□□□□ -1.82
PEX1O43933 AC083863.1-201ENST00000438811 231 ntBASIC3.71□□□□□ -1.82
PEX1O43933 RPS29P7-201ENST00000439662 171 ntBASIC3.71□□□□□ -1.82
PEX1O43933 NEFMP1-201ENST00000443423 1006 ntBASIC3.71□□□□□ -1.82
PEX1O43933 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.71□□□□□ -1.82
PEX1O43933 MTCO3P10-201ENST00000455912 772 ntBASIC3.71□□□□□ -1.82
PEX1O43933 AC087884.1-201ENST00000469738 328 ntBASIC3.71□□□□□ -1.82
PEX1O43933 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.71□□□□□ -1.82
PEX1O43933 TRBV12-2-201ENST00000489763 344 ntBASIC3.71□□□□□ -1.82
PEX1O43933 AP002812.1-201ENST00000495378 474 ntBASIC3.71□□□□□ -1.82
PEX1O43933 RPS27P27-201ENST00000498779 255 ntBASIC3.71□□□□□ -1.82
PEX1O43933 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.71□□□□□ -1.82
PEX1O43933 RNU6-1213P-201ENST00000517075 94 ntBASIC3.71□□□□□ -1.82
PEX1O43933 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.71□□□□□ -1.82
PEX1O43933 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.71□□□□□ -1.82
PEX1O43933 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PEX1O43933 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.71□□□□□ -1.82
PEX1O43933 IMMP1LP2-201ENST00000552954 492 ntBASIC3.71□□□□□ -1.82
PEX1O43933 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.71□□□□□ -1.82
PEX1O43933 AC005951.2-201ENST00000576282 495 ntBASIC3.71□□□□□ -1.82
PEX1O43933 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PEX1O43933 AC006504.6-201ENST00000590142 199 ntBASIC3.71□□□□□ -1.82
PEX1O43933 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.71□□□□□ -1.82
PEX1O43933 AL138889.2-201ENST00000603883 242 ntBASIC3.71□□□□□ -1.82
PEX1O43933 HMGN2P28-201ENST00000606102 262 ntBASIC3.71□□□□□ -1.82
PEX1O43933 AL355802.3-201ENST00000607571 545 ntBASIC3.71□□□□□ -1.82
PEX1O43933 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.71□□□□□ -1.82
PEX1O43933 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.71□□□□□ -1.82
PEX1O43933 AC034229.5-201ENST00000624258 185 ntBASIC3.71□□□□□ -1.82
PEX1O43933 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
PEX1O43933 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PEX1O43933 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PEX1O43933 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.71□□□□□ -1.82
PEX1O43933 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PEX1O43933 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PEX1O43933 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.7□□□□□ -1.82
PEX1O43933 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.7□□□□□ -1.82
PEX1O43933 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PEX1O43933 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PEX1O43933 Y_RNA.146-201ENST00000363549 102 ntBASIC3.7□□□□□ -1.82
PEX1O43933 Y_RNA.187-201ENST00000363918 113 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms