Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 NEFMP1-201ENST00000443423 1006 ntBASIC3.29□□□□□ -1.88
LDB2O43679 CBWD4P-201ENST00000445695 655 ntBASIC3.29□□□□□ -1.88
LDB2O43679 AL118520.1-201ENST00000450770 291 ntBASIC3.29□□□□□ -1.88
LDB2O43679 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.29□□□□□ -1.88
LDB2O43679 VN1R17P-201ENST00000472048 1090 ntBASIC3.29□□□□□ -1.88
LDB2O43679 HSPE1P6-201ENST00000479457 291 ntBASIC3.29□□□□□ -1.88
LDB2O43679 HMGN1P12-201ENST00000499125 195 ntBASIC3.29□□□□□ -1.88
LDB2O43679 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LDB2O43679 AC004062.1-201ENST00000509926 645 ntBASIC3.29□□□□□ -1.88
LDB2O43679 AC098591.2-201ENST00000510152 315 ntBASIC3.29□□□□□ -1.88
LDB2O43679 LRRC34P2-201ENST00000514850 553 ntBASIC3.29□□□□□ -1.88
LDB2O43679 RNU6-507P-201ENST00000516045 100 ntBASIC3.29□□□□□ -1.88
LDB2O43679 SNORA74D-201ENST00000516404 141 ntBASIC3.29□□□□□ -1.88
LDB2O43679 RN7SKP258-201ENST00000517151 304 ntBASIC3.29□□□□□ -1.88
LDB2O43679 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.29□□□□□ -1.88
LDB2O43679 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.29□□□□□ -1.88
LDB2O43679 ADI1P3-201ENST00000549509 470 ntBASIC3.29□□□□□ -1.88
LDB2O43679 AC005951.2-201ENST00000576282 495 ntBASIC3.29□□□□□ -1.88
LDB2O43679 MIR3690-201ENST00000580266 75 ntBASIC3.29□□□□□ -1.88
LDB2O43679 MIR3200-201ENST00000580767 85 ntBASIC3.29□□□□□ -1.88
LDB2O43679 AC091135.1-201ENST00000585943 307 ntBASIC3.29□□□□□ -1.88
LDB2O43679 AC018638.8-201ENST00000588755 281 ntBASIC3.29□□□□□ -1.88
LDB2O43679 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.29□□□□□ -1.88
LDB2O43679 AC009994.1-201ENST00000606889 253 ntBASIC3.29□□□□□ -1.88
LDB2O43679 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.29□□□□□ -1.88
LDB2O43679 AC073476.4-201ENST00000628409 72 ntBASIC3.29□□□□□ -1.88
LDB2O43679 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
LDB2O43679 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.29□□□□□ -1.88
LDB2O43679 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.29□□□□□ -1.88
LDB2O43679 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.29□□□□□ -1.88
LDB2O43679 Z83843.1-201ENST00000604070 3685 ntBASIC3.28□□□□□ -1.88
LDB2O43679 RNU5A-1-201ENST00000362698 116 ntBASIC3.28□□□□□ -1.88
LDB2O43679 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
LDB2O43679 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.28□□□□□ -1.88
LDB2O43679 AL606923.1-201ENST00000406616 190 ntBASIC3.28□□□□□ -1.88
LDB2O43679 RNU2-41P-201ENST00000410991 178 ntBASIC3.28□□□□□ -1.88
LDB2O43679 OR6C66P-201ENST00000414917 930 ntBASIC3.28□□□□□ -1.88
LDB2O43679 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.28□□□□□ -1.88
LDB2O43679 CALM2P2-201ENST00000428512 440 ntBASIC3.28□□□□□ -1.88
LDB2O43679 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.28□□□□□ -1.88
LDB2O43679 snoU13.4-201ENST00000458916 104 ntBASIC3.28□□□□□ -1.88
LDB2O43679 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.28□□□□□ -1.88
LDB2O43679 RPL21P104-201ENST00000464143 478 ntBASIC3.28□□□□□ -1.88
LDB2O43679 RPL23AP11-201ENST00000475260 469 ntBASIC3.28□□□□□ -1.88
LDB2O43679 AL049830.2-201ENST00000480072 201 ntBASIC3.28□□□□□ -1.88
LDB2O43679 RPS4XP22-201ENST00000480755 780 ntBASIC3.28□□□□□ -1.88
LDB2O43679 AC091951.2-201ENST00000500762 203 ntBASIC3.28□□□□□ -1.88
LDB2O43679 AC104806.1-201ENST00000508720 308 ntBASIC3.28□□□□□ -1.88
LDB2O43679 AC010486.1-201ENST00000511793 424 ntBASIC3.28□□□□□ -1.88
LDB2O43679 RNU6-875P-201ENST00000516488 106 ntBASIC3.28□□□□□ -1.88
LDB2O43679 SCARNA20.6-201ENST00000517251 106 ntBASIC3.28□□□□□ -1.88
LDB2O43679 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.28□□□□□ -1.88
LDB2O43679 AC104027.1-201ENST00000521887 300 ntBASIC3.28□□□□□ -1.88
LDB2O43679 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.28□□□□□ -1.88
LDB2O43679 SNRPGP16-201ENST00000533275 226 ntBASIC3.28□□□□□ -1.88
LDB2O43679 AC004024.1-201ENST00000549244 247 ntBASIC3.28□□□□□ -1.88
LDB2O43679 BNIP3P6-201ENST00000549284 499 ntBASIC3.28□□□□□ -1.88
LDB2O43679 RPL23AP84-201ENST00000571193 464 ntBASIC3.28□□□□□ -1.88
LDB2O43679 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.28□□□□□ -1.88
LDB2O43679 AC174048.1-201ENST00000603389 144 ntBASIC3.28□□□□□ -1.88
LDB2O43679 AL162713.1-201ENST00000604480 262 ntBASIC3.28□□□□□ -1.88
LDB2O43679 AC007619.2-201ENST00000605743 379 ntBASIC3.28□□□□□ -1.88
LDB2O43679 AL365204.3-201ENST00000612448 685 ntBASIC3.28□□□□□ -1.88
LDB2O43679 Y_RNA.804-201ENST00000615262 101 ntBASIC3.28□□□□□ -1.88
LDB2O43679 AC104985.2-201ENST00000620598 500 ntBASIC3.28□□□□□ -1.88
LDB2O43679 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
LDB2O43679 AC099654.5-201ENST00000636479 350 ntBASIC3.28□□□□□ -1.88
LDB2O43679 U6.98-201ENST00000637157 84 ntBASIC3.28□□□□□ -1.88
LDB2O43679 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
LDB2O43679 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LDB2O43679 AC010733.2-201ENST00000589496 5702 ntBASIC3.28□□□□□ -1.88
LDB2O43679 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LDB2O43679 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LDB2O43679 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.28□□□□□ -1.89
LDB2O43679 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LDB2O43679 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
LDB2O43679 DEFB108F-201ENST00000344638 222 ntBASIC3.27□□□□□ -1.89
LDB2O43679 RNU6-1287P-201ENST00000362914 107 ntBASIC3.27□□□□□ -1.89
LDB2O43679 Y_RNA.231-201ENST00000364358 102 ntBASIC3.27□□□□□ -1.89
LDB2O43679 RNU6-1060P-201ENST00000384664 107 ntBASIC3.27□□□□□ -1.89
LDB2O43679 MIR514A2-201ENST00000385131 88 ntBASIC3.27□□□□□ -1.89
LDB2O43679 MIR514A3-201ENST00000385132 88 ntBASIC3.27□□□□□ -1.89
LDB2O43679 RNU6-1009P-201ENST00000390996 107 ntBASIC3.27□□□□□ -1.89
LDB2O43679 RNU4-46P-201ENST00000410818 138 ntBASIC3.27□□□□□ -1.89
LDB2O43679 RPL7L1P10-201ENST00000427790 463 ntBASIC3.27□□□□□ -1.89
LDB2O43679 VDAC1P3-201ENST00000434069 851 ntBASIC3.27□□□□□ -1.89
LDB2O43679 CST9LP2-201ENST00000437612 320 ntBASIC3.27□□□□□ -1.89
LDB2O43679 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.27□□□□□ -1.89
LDB2O43679 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.27□□□□□ -1.89
LDB2O43679 MTND3P16-201ENST00000452205 344 ntBASIC3.27□□□□□ -1.89
LDB2O43679 RPL23AP31-201ENST00000456160 467 ntBASIC3.27□□□□□ -1.89
LDB2O43679 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.27□□□□□ -1.89
LDB2O43679 SNRPFP3-201ENST00000457792 225 ntBASIC3.27□□□□□ -1.89
LDB2O43679 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.27□□□□□ -1.89
LDB2O43679 SNORA31.3-201ENST00000516029 96 ntBASIC3.27□□□□□ -1.89
LDB2O43679 RNU6-685P-201ENST00000517088 95 ntBASIC3.27□□□□□ -1.89
LDB2O43679 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.27□□□□□ -1.89
LDB2O43679 RANP3-201ENST00000530970 276 ntBASIC3.27□□□□□ -1.89
LDB2O43679 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.27□□□□□ -1.89
LDB2O43679 AL355836.1-201ENST00000555951 870 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 164.7 ms