Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.73□□□□□ -1.81
PROM1O43490 XIAPP1-201ENST00000603162 600 ntBASIC3.73□□□□□ -1.81
PROM1O43490 AC009570.1-201ENST00000609599 745 ntBASIC3.73□□□□□ -1.81
PROM1O43490 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.73□□□□□ -1.81
PROM1O43490 AL591424.2-201ENST00000617023 128 ntBASIC3.73□□□□□ -1.81
PROM1O43490 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.73□□□□□ -1.81
PROM1O43490 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PROM1O43490 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
PROM1O43490 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PROM1O43490 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.73□□□□□ -1.81
PROM1O43490 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.73□□□□□ -1.81
PROM1O43490 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.73□□□□□ -1.81
PROM1O43490 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PROM1O43490 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PROM1O43490 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.72□□□□□ -1.81
PROM1O43490 Y_RNA.128-201ENST00000363391 112 ntBASIC3.72□□□□□ -1.81
PROM1O43490 Y_RNA.339-201ENST00000365325 102 ntBASIC3.72□□□□□ -1.81
PROM1O43490 SNORA4.3-201ENST00000365564 137 ntBASIC3.72□□□□□ -1.81
PROM1O43490 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
PROM1O43490 MIR559-201ENST00000385188 96 ntBASIC3.72□□□□□ -1.81
PROM1O43490 RNU6-882P-201ENST00000391025 103 ntBASIC3.72□□□□□ -1.81
PROM1O43490 SNORA75.4-201ENST00000391278 119 ntBASIC3.72□□□□□ -1.81
PROM1O43490 PTMAP5-201ENST00000393073 333 ntBASIC3.72□□□□□ -1.81
PROM1O43490 Z98941.1-201ENST00000407764 100 ntBASIC3.72□□□□□ -1.81
PROM1O43490 RNA5SP129-201ENST00000410276 118 ntBASIC3.72□□□□□ -1.81
PROM1O43490 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PROM1O43490 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.72□□□□□ -1.81
PROM1O43490 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.72□□□□□ -1.81
PROM1O43490 DYNLL1P5-201ENST00000467158 270 ntBASIC3.72□□□□□ -1.81
PROM1O43490 RPS27P27-201ENST00000498779 255 ntBASIC3.72□□□□□ -1.81
PROM1O43490 BTF3L4P4-201ENST00000506381 449 ntBASIC3.72□□□□□ -1.81
PROM1O43490 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.72□□□□□ -1.81
PROM1O43490 AC005741.1-201ENST00000511094 432 ntBASIC3.72□□□□□ -1.81
PROM1O43490 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.72□□□□□ -1.81
PROM1O43490 RNA5SP454-201ENST00000517231 127 ntBASIC3.72□□□□□ -1.81
PROM1O43490 TRMT10BP1-201ENST00000519377 943 ntBASIC3.72□□□□□ -1.81
PROM1O43490 COPS8P3-201ENST00000526024 482 ntBASIC3.72□□□□□ -1.81
PROM1O43490 AC018630.1-201ENST00000541376 925 ntBASIC3.72□□□□□ -1.81
PROM1O43490 MIR3672-201ENST00000584290 82 ntBASIC3.72□□□□□ -1.81
PROM1O43490 AC104763.2-201ENST00000604179 382 ntBASIC3.72□□□□□ -1.81
PROM1O43490 AC022893.3-201ENST00000607665 437 ntBASIC3.72□□□□□ -1.81
PROM1O43490 AC040896.1-201ENST00000613819 479 ntBASIC3.72□□□□□ -1.81
PROM1O43490 AL359547.2-201ENST00000615810 418 ntBASIC3.72□□□□□ -1.81
PROM1O43490 AC103705.1-201ENST00000619013 241 ntBASIC3.72□□□□□ -1.81
PROM1O43490 MIR4275-201ENST00000636486 87 ntBASIC3.72□□□□□ -1.81
PROM1O43490 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.72□□□□□ -1.81
PROM1O43490 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.72□□□□□ -1.81
PROM1O43490 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
PROM1O43490 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
PROM1O43490 IPO8P1-201ENST00000455509 3109 ntBASIC3.72□□□□□ -1.81
PROM1O43490 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.72□□□□□ -1.81
PROM1O43490 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PROM1O43490 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PROM1O43490 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.71□□□□□ -1.81
PROM1O43490 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.71□□□□□ -1.81
PROM1O43490 MTCO1P12-201ENST00000414273 1543 ntBASIC3.71□□□□□ -1.82
PROM1O43490 UBE3AP2-201ENST00000429033 2259 ntBASIC3.71□□□□□ -1.82
PROM1O43490 RNU6-254P-201ENST00000363377 107 ntBASIC3.71□□□□□ -1.82
PROM1O43490 RNU6-525P-201ENST00000363685 104 ntBASIC3.71□□□□□ -1.82
PROM1O43490 RNU6-288P-201ENST00000363690 104 ntBASIC3.71□□□□□ -1.82
PROM1O43490 Y_RNA.216-201ENST00000364205 93 ntBASIC3.71□□□□□ -1.82
PROM1O43490 DEFB109C-201ENST00000382575 264 ntBASIC3.71□□□□□ -1.82
PROM1O43490 DEFB109B-201ENST00000382656 264 ntBASIC3.71□□□□□ -1.82
PROM1O43490 RNU6-1074P-201ENST00000383995 104 ntBASIC3.71□□□□□ -1.82
PROM1O43490 Y_RNA.445-201ENST00000384168 102 ntBASIC3.71□□□□□ -1.82
PROM1O43490 RNU6-474P-201ENST00000384243 107 ntBASIC3.71□□□□□ -1.82
PROM1O43490 RNU6-393P-201ENST00000384475 107 ntBASIC3.71□□□□□ -1.82
PROM1O43490 MIR606-201ENST00000384851 96 ntBASIC3.71□□□□□ -1.82
PROM1O43490 MIR450B-201ENST00000401182 78 ntBASIC3.71□□□□□ -1.82
PROM1O43490 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.71□□□□□ -1.82
PROM1O43490 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PROM1O43490 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.71□□□□□ -1.82
PROM1O43490 GOT2P5-201ENST00000433995 546 ntBASIC3.71□□□□□ -1.82
PROM1O43490 RPL23AP83-201ENST00000434984 473 ntBASIC3.71□□□□□ -1.82
PROM1O43490 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.71□□□□□ -1.82
PROM1O43490 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.71□□□□□ -1.82
PROM1O43490 Y_RNA.631-201ENST00000459607 101 ntBASIC3.71□□□□□ -1.82
PROM1O43490 RN7SL93P-201ENST00000463035 293 ntBASIC3.71□□□□□ -1.82
PROM1O43490 PPIAP15-201ENST00000479662 484 ntBASIC3.71□□□□□ -1.82
PROM1O43490 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.71□□□□□ -1.82
PROM1O43490 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.71□□□□□ -1.82
PROM1O43490 AC026726.1-201ENST00000512859 601 ntBASIC3.71□□□□□ -1.82
PROM1O43490 RNU1-61P-201ENST00000516107 151 ntBASIC3.71□□□□□ -1.82
PROM1O43490 RNU6-352P-201ENST00000516908 107 ntBASIC3.71□□□□□ -1.82
PROM1O43490 RN7SKP60-201ENST00000516985 239 ntBASIC3.71□□□□□ -1.82
PROM1O43490 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.71□□□□□ -1.82
PROM1O43490 AC087369.1-201ENST00000520775 996 ntBASIC3.71□□□□□ -1.82
PROM1O43490 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.71□□□□□ -1.82
PROM1O43490 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.71□□□□□ -1.82
PROM1O43490 APOOP3-201ENST00000536787 586 ntBASIC3.71□□□□□ -1.82
PROM1O43490 RN7SL703P-201ENST00000578485 302 ntBASIC3.71□□□□□ -1.82
PROM1O43490 AC067852.3-201ENST00000589177 561 ntBASIC3.71□□□□□ -1.82
PROM1O43490 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.71□□□□□ -1.82
PROM1O43490 AL670379.10-201ENST00000604330 253 ntBASIC3.71□□□□□ -1.82
PROM1O43490 AL670379.9-201ENST00000605428 253 ntBASIC3.71□□□□□ -1.82
PROM1O43490 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.71□□□□□ -1.82
PROM1O43490 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
PROM1O43490 AL136164.4-201ENST00000625013 2135 ntBASIC3.71□□□□□ -1.82
PROM1O43490 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PROM1O43490 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms