Protein–RNA interactions for Protein: O43248

HOXC11, Homeobox protein Hox-C11, humanhuman

Predicted RBP Predictions only

Length 304 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11O43248 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.35□□□□□ -1.87
HOXC11O43248 AL359212.1-201ENST00000556608 614 ntBASIC3.35□□□□□ -1.87
HOXC11O43248 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.35□□□□□ -1.87
HOXC11O43248 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
HOXC11O43248 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.35□□□□□ -1.87
HOXC11O43248 AC008536.2-201ENST00000607284 349 ntBASIC3.35□□□□□ -1.87
HOXC11O43248 AC007684.1-201ENST00000609671 477 ntBASIC3.35□□□□□ -1.87
HOXC11O43248 AC073534.2-201ENST00000620377 381 ntBASIC3.35□□□□□ -1.87
HOXC11O43248 U6.99-201ENST00000637524 83 ntBASIC3.35□□□□□ -1.87
HOXC11O43248 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.35□□□□□ -1.87
HOXC11O43248 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.35□□□□□ -1.87
HOXC11O43248 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.35□□□□□ -1.87
HOXC11O43248 AP003122.5-201ENST00000527668 3766 ntBASIC3.35□□□□□ -1.87
HOXC11O43248 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HOXC11O43248 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HOXC11O43248 RNU4-48P-201ENST00000365559 182 ntBASIC3.34□□□□□ -1.87
HOXC11O43248 SNORA4.3-201ENST00000365564 137 ntBASIC3.34□□□□□ -1.87
HOXC11O43248 RNU6-658P-201ENST00000384606 106 ntBASIC3.34□□□□□ -1.87
HOXC11O43248 CISD1P1-201ENST00000393907 327 ntBASIC3.34□□□□□ -1.87
HOXC11O43248 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC3.34□□□□□ -1.87
HOXC11O43248 AL353729.1-201ENST00000425044 720 ntBASIC3.34□□□□□ -1.87
HOXC11O43248 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.34□□□□□ -1.87
HOXC11O43248 AC002486.1-201ENST00000435098 391 ntBASIC3.34□□□□□ -1.87
HOXC11O43248 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.34□□□□□ -1.87
HOXC11O43248 RN7SL863P-201ENST00000462370 296 ntBASIC3.34□□□□□ -1.87
HOXC11O43248 CENPBD1P1-201ENST00000464061 469 ntBASIC3.34□□□□□ -1.87
HOXC11O43248 RPS26P21-201ENST00000475397 348 ntBASIC3.34□□□□□ -1.87
HOXC11O43248 RPS29P20-201ENST00000489592 171 ntBASIC3.34□□□□□ -1.87
HOXC11O43248 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.34□□□□□ -1.87
HOXC11O43248 AC104806.1-201ENST00000508720 308 ntBASIC3.34□□□□□ -1.87
HOXC11O43248 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HOXC11O43248 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.34□□□□□ -1.87
HOXC11O43248 AC135279.1-201ENST00000543493 504 ntBASIC3.34□□□□□ -1.87
HOXC11O43248 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.34□□□□□ -1.87
HOXC11O43248 AL157871.3-201ENST00000557231 293 ntBASIC3.34□□□□□ -1.87
HOXC11O43248 H3F3AP1-201ENST00000559984 334 ntBASIC3.34□□□□□ -1.87
HOXC11O43248 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.34□□□□□ -1.87
HOXC11O43248 AGGF1P4-201ENST00000568249 801 ntBASIC3.34□□□□□ -1.87
HOXC11O43248 MIR1273C-201ENST00000578669 77 ntBASIC3.34□□□□□ -1.87
HOXC11O43248 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC3.34□□□□□ -1.87
HOXC11O43248 AL136363.2-201ENST00000604173 851 ntBASIC3.34□□□□□ -1.87
HOXC11O43248 AC107294.3-201ENST00000609211 526 ntBASIC3.34□□□□□ -1.87
HOXC11O43248 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.34□□□□□ -1.88
HOXC11O43248 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HOXC11O43248 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
HOXC11O43248 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.33□□□□□ -1.88
HOXC11O43248 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HOXC11O43248 NACAP2-201ENST00000318548 624 ntBASIC3.33□□□□□ -1.88
HOXC11O43248 Y_RNA.33-201ENST00000362591 102 ntBASIC3.33□□□□□ -1.88
HOXC11O43248 RNU6-1287P-201ENST00000362914 107 ntBASIC3.33□□□□□ -1.88
HOXC11O43248 RNU6-1120P-201ENST00000362988 108 ntBASIC3.33□□□□□ -1.88
HOXC11O43248 RNU6-778P-201ENST00000363269 103 ntBASIC3.33□□□□□ -1.88
HOXC11O43248 RNU6-805P-201ENST00000365643 106 ntBASIC3.33□□□□□ -1.88
HOXC11O43248 RNU6-1060P-201ENST00000384664 107 ntBASIC3.33□□□□□ -1.88
HOXC11O43248 RNU6-1025P-201ENST00000410629 104 ntBASIC3.33□□□□□ -1.88
HOXC11O43248 RNA5SP229-201ENST00000410809 99 ntBASIC3.33□□□□□ -1.88
HOXC11O43248 RNU6-55P-201ENST00000411092 107 ntBASIC3.33□□□□□ -1.88
HOXC11O43248 RNU6-954P-201ENST00000411355 107 ntBASIC3.33□□□□□ -1.88
HOXC11O43248 MTATP6P18-201ENST00000417994 673 ntBASIC3.33□□□□□ -1.88
HOXC11O43248 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.33□□□□□ -1.88
HOXC11O43248 AC010975.2-201ENST00000427781 588 ntBASIC3.33□□□□□ -1.88
HOXC11O43248 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.33□□□□□ -1.88
HOXC11O43248 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.33□□□□□ -1.88
HOXC11O43248 AL451074.3-201ENST00000437709 472 ntBASIC3.33□□□□□ -1.88
HOXC11O43248 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.33□□□□□ -1.88
HOXC11O43248 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.33□□□□□ -1.88
HOXC11O43248 MTATP6P7-201ENST00000453315 681 ntBASIC3.33□□□□□ -1.88
HOXC11O43248 S100A11P2-201ENST00000467589 312 ntBASIC3.33□□□□□ -1.88
HOXC11O43248 SUMO2P6-201ENST00000505273 288 ntBASIC3.33□□□□□ -1.88
HOXC11O43248 AC108078.1-201ENST00000508073 725 ntBASIC3.33□□□□□ -1.88
HOXC11O43248 RBBP4P6-201ENST00000508098 202 ntBASIC3.33□□□□□ -1.88
HOXC11O43248 AC091133.4-201ENST00000511142 308 ntBASIC3.33□□□□□ -1.88
HOXC11O43248 RAC1P5-201ENST00000512182 576 ntBASIC3.33□□□□□ -1.88
HOXC11O43248 SNORD27.1-201ENST00000516319 72 ntBASIC3.33□□□□□ -1.88
HOXC11O43248 AC022634.1-201ENST00000520765 532 ntBASIC3.33□□□□□ -1.88
HOXC11O43248 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.33□□□□□ -1.88
HOXC11O43248 TRAV37-201ENST00000553906 342 ntBASIC3.33□□□□□ -1.88
HOXC11O43248 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.33□□□□□ -1.88
HOXC11O43248 AC010546.1-201ENST00000569391 485 ntBASIC3.33□□□□□ -1.88
HOXC11O43248 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC3.33□□□□□ -1.88
HOXC11O43248 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.33□□□□□ -1.88
HOXC11O43248 AC005498.1-201ENST00000592125 465 ntBASIC3.33□□□□□ -1.88
HOXC11O43248 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.33□□□□□ -1.88
HOXC11O43248 uc_338.1-201ENST00000612113 180 ntBASIC3.33□□□□□ -1.88
HOXC11O43248 AC024940.5-201ENST00000622889 474 ntBASIC3.33□□□□□ -1.88
HOXC11O43248 AC110079.1-202ENST00000635213 138 ntBASIC3.33□□□□□ -1.88
HOXC11O43248 U2.21-201ENST00000637295 81 ntBASIC3.33□□□□□ -1.88
HOXC11O43248 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HOXC11O43248 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
HOXC11O43248 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
HOXC11O43248 MTND5P26-201ENST00000426018 1752 ntBASIC3.33□□□□□ -1.88
HOXC11O43248 AC110491.1-201ENST00000562191 2010 ntBASIC3.32□□□□□ -1.88
HOXC11O43248 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
HOXC11O43248 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.32□□□□□ -1.88
HOXC11O43248 SNORD115-7-201ENST00000365306 82 ntBASIC3.32□□□□□ -1.88
HOXC11O43248 RNU6-395P-201ENST00000365662 106 ntBASIC3.32□□□□□ -1.88
HOXC11O43248 Y_RNA.576-201ENST00000384781 102 ntBASIC3.32□□□□□ -1.88
HOXC11O43248 MIR634-201ENST00000385208 97 ntBASIC3.32□□□□□ -1.88
HOXC11O43248 RNU2-9P-201ENST00000410194 145 ntBASIC3.32□□□□□ -1.88
HOXC11O43248 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms