Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 AC078974.1-201ENST00000411597 223 ntBASIC2.52□□□□□ -2.01
CLDN3O15551 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC2.52□□□□□ -2.01
CLDN3O15551 MTCO3P30-201ENST00000426425 670 ntBASIC2.52□□□□□ -2.01
CLDN3O15551 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC2.52□□□□□ -2.01
CLDN3O15551 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.52□□□□□ -2.01
CLDN3O15551 TIMM9P1-201ENST00000436122 256 ntBASIC2.52□□□□□ -2.01
CLDN3O15551 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.52□□□□□ -2.01
CLDN3O15551 SDR42E1P3-201ENST00000438345 502 ntBASIC2.52□□□□□ -2.01
CLDN3O15551 FABP5P15-201ENST00000453566 214 ntBASIC2.52□□□□□ -2.01
CLDN3O15551 RBM43P1-201ENST00000476891 1081 ntBASIC2.52□□□□□ -2.01
CLDN3O15551 SNORA31.6-201ENST00000516241 130 ntBASIC2.52□□□□□ -2.01
CLDN3O15551 RNA5SP402-201ENST00000517148 110 ntBASIC2.52□□□□□ -2.01
CLDN3O15551 AP003467.2-201ENST00000520175 319 ntBASIC2.52□□□□□ -2.01
CLDN3O15551 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.52□□□□□ -2.01
CLDN3O15551 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.52□□□□□ -2.01
CLDN3O15551 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.52□□□□□ -2.01
CLDN3O15551 AC021739.1-201ENST00000559631 174 ntBASIC2.52□□□□□ -2.01
CLDN3O15551 AC009063.1-201ENST00000563342 702 ntBASIC2.52□□□□□ -2.01
CLDN3O15551 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.52□□□□□ -2.01
CLDN3O15551 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.52□□□□□ -2.01
CLDN3O15551 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.52□□□□□ -2.01
CLDN3O15551 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.52□□□□□ -2.01
CLDN3O15551 AC021755.4-201ENST00000616620 456 ntBASIC2.52□□□□□ -2.01
CLDN3O15551 AP002782.1-201ENST00000623107 614 ntBASIC2.52□□□□□ -2.01
CLDN3O15551 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CLDN3O15551 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CLDN3O15551 AC007336.1-201ENST00000576365 3828 ntBASIC2.51□□□□□ -2.01
CLDN3O15551 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.51□□□□□ -2.01
CLDN3O15551 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CLDN3O15551 SNORA38-201ENST00000363946 132 ntBASIC2.51□□□□□ -2.01
CLDN3O15551 Y_RNA.302-201ENST00000364997 102 ntBASIC2.51□□□□□ -2.01
CLDN3O15551 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.51□□□□□ -2.01
CLDN3O15551 RNU6-584P-201ENST00000410350 95 ntBASIC2.51□□□□□ -2.01
CLDN3O15551 ELOCP17-201ENST00000414751 326 ntBASIC2.51□□□□□ -2.01
CLDN3O15551 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.51□□□□□ -2.01
CLDN3O15551 ISCA1P1-201ENST00000426679 387 ntBASIC2.51□□□□□ -2.01
CLDN3O15551 MTND1P20-201ENST00000430341 950 ntBASIC2.51□□□□□ -2.01
CLDN3O15551 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.51□□□□□ -2.01
CLDN3O15551 MTND4P25-201ENST00000441039 533 ntBASIC2.51□□□□□ -2.01
CLDN3O15551 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CLDN3O15551 OR6C5P-201ENST00000452388 923 ntBASIC2.51□□□□□ -2.01
CLDN3O15551 AC233279.1-201ENST00000455300 423 ntBASIC2.51□□□□□ -2.01
CLDN3O15551 AC139453.3-201ENST00000493276 369 ntBASIC2.51□□□□□ -2.01
CLDN3O15551 GTF2IP9-201ENST00000502460 301 ntBASIC2.51□□□□□ -2.01
CLDN3O15551 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.51□□□□□ -2.01
CLDN3O15551 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.51□□□□□ -2.01
CLDN3O15551 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.51□□□□□ -2.01
CLDN3O15551 AC023050.2-201ENST00000544968 387 ntBASIC2.51□□□□□ -2.01
CLDN3O15551 AC135628.1-201ENST00000568867 534 ntBASIC2.51□□□□□ -2.01
CLDN3O15551 BNIP3P39-201ENST00000601077 554 ntBASIC2.51□□□□□ -2.01
CLDN3O15551 AL391813.1-201ENST00000603098 260 ntBASIC2.51□□□□□ -2.01
CLDN3O15551 AL136370.1-201ENST00000608166 691 ntBASIC2.51□□□□□ -2.01
CLDN3O15551 AC104237.2-201ENST00000612456 443 ntBASIC2.51□□□□□ -2.01
CLDN3O15551 AC064859.1-201ENST00000624741 174 ntBASIC2.51□□□□□ -2.01
CLDN3O15551 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.51□□□□□ -2.01
CLDN3O15551 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.5□□□□□ -2.01
CLDN3O15551 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
CLDN3O15551 RNU6-220P-201ENST00000390919 107 ntBASIC2.5□□□□□ -2.01
CLDN3O15551 RSL24D1P4-201ENST00000400938 484 ntBASIC2.5□□□□□ -2.01
CLDN3O15551 AC007064.1-201ENST00000412238 351 ntBASIC2.5□□□□□ -2.01
CLDN3O15551 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.5□□□□□ -2.01
CLDN3O15551 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.5□□□□□ -2.01
CLDN3O15551 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.5□□□□□ -2.01
CLDN3O15551 AL161651.1-201ENST00000440882 223 ntBASIC2.5□□□□□ -2.01
CLDN3O15551 NEFMP1-201ENST00000443423 1006 ntBASIC2.5□□□□□ -2.01
CLDN3O15551 COX6CP12-201ENST00000446748 202 ntBASIC2.5□□□□□ -2.01
CLDN3O15551 HMGN2P10-201ENST00000448085 265 ntBASIC2.5□□□□□ -2.01
CLDN3O15551 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.5□□□□□ -2.01
CLDN3O15551 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.5□□□□□ -2.01
CLDN3O15551 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC2.5□□□□□ -2.01
CLDN3O15551 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.5□□□□□ -2.01
CLDN3O15551 RPL23AP49-201ENST00000492925 468 ntBASIC2.5□□□□□ -2.01
CLDN3O15551 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CLDN3O15551 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.5□□□□□ -2.01
CLDN3O15551 HSPE1P23-201ENST00000509838 286 ntBASIC2.5□□□□□ -2.01
CLDN3O15551 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.5□□□□□ -2.01
CLDN3O15551 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.5□□□□□ -2.01
CLDN3O15551 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.5□□□□□ -2.01
CLDN3O15551 MTCYBP20-201ENST00000524239 1129 ntBASIC2.5□□□□□ -2.01
CLDN3O15551 AP006587.4-201ENST00000526053 529 ntBASIC2.5□□□□□ -2.01
CLDN3O15551 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CLDN3O15551 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.5□□□□□ -2.01
CLDN3O15551 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC2.5□□□□□ -2.01
CLDN3O15551 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.5□□□□□ -2.01
CLDN3O15551 AC006199.1-201ENST00000548728 219 ntBASIC2.5□□□□□ -2.01
CLDN3O15551 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC2.5□□□□□ -2.01
CLDN3O15551 AC091544.4-201ENST00000555268 342 ntBASIC2.5□□□□□ -2.01
CLDN3O15551 AL121821.2-201ENST00000556081 394 ntBASIC2.5□□□□□ -2.01
CLDN3O15551 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CLDN3O15551 AL356432.3-201ENST00000568952 465 ntBASIC2.5□□□□□ -2.01
CLDN3O15551 MIR4307-201ENST00000582802 84 ntBASIC2.5□□□□□ -2.01
CLDN3O15551 AC073544.2-201ENST00000601155 540 ntBASIC2.5□□□□□ -2.01
CLDN3O15551 KC877982.1-201ENST00000602313 470 ntBASIC2.5□□□□□ -2.01
CLDN3O15551 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.5□□□□□ -2.01
CLDN3O15551 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.5□□□□□ -2.01
CLDN3O15551 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.5□□□□□ -2.01
CLDN3O15551 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.5□□□□□ -2.01
CLDN3O15551 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC2.5□□□□□ -2.01
CLDN3O15551 ZNF271P-202ENST00000465539 1970 ntBASIC2.5□□□□□ -2.01
CLDN3O15551 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms