Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
CLOCKO15516 RNU4-53P-201ENST00000410828 140 ntBASIC2.14□□□□□ -2.07
CLOCKO15516 NANOGP5-201ENST00000424456 877 ntBASIC2.14□□□□□ -2.07
CLOCKO15516 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.14□□□□□ -2.07
CLOCKO15516 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.14□□□□□ -2.07
CLOCKO15516 RPS15AP28-201ENST00000435088 386 ntBASIC2.14□□□□□ -2.07
CLOCKO15516 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC2.14□□□□□ -2.07
CLOCKO15516 AL161651.1-201ENST00000440882 223 ntBASIC2.14□□□□□ -2.07
CLOCKO15516 IFNA11P-201ENST00000446352 526 ntBASIC2.14□□□□□ -2.07
CLOCKO15516 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.14□□□□□ -2.07
CLOCKO15516 AC080013.2-201ENST00000460866 323 ntBASIC2.14□□□□□ -2.07
CLOCKO15516 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.14□□□□□ -2.07
CLOCKO15516 AC055855.1-201ENST00000489563 579 ntBASIC2.14□□□□□ -2.07
CLOCKO15516 AC134050.1-201ENST00000495088 933 ntBASIC2.14□□□□□ -2.07
CLOCKO15516 AC106872.3-201ENST00000495104 446 ntBASIC2.14□□□□□ -2.07
CLOCKO15516 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC2.14□□□□□ -2.07
CLOCKO15516 RN7SL636P-201ENST00000497504 294 ntBASIC2.14□□□□□ -2.07
CLOCKO15516 RPF2P2-201ENST00000504693 896 ntBASIC2.14□□□□□ -2.07
CLOCKO15516 MTCYBP43-201ENST00000513621 740 ntBASIC2.14□□□□□ -2.07
CLOCKO15516 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.14□□□□□ -2.07
CLOCKO15516 SNORA31.3-201ENST00000516029 96 ntBASIC2.14□□□□□ -2.07
CLOCKO15516 RNU6-64P-201ENST00000517119 105 ntBASIC2.14□□□□□ -2.07
CLOCKO15516 AP005902.1-201ENST00000521358 186 ntBASIC2.14□□□□□ -2.07
CLOCKO15516 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.14□□□□□ -2.07
CLOCKO15516 AP003122.3-201ENST00000526316 255 ntBASIC2.14□□□□□ -2.07
CLOCKO15516 AC021269.2-201ENST00000532318 330 ntBASIC2.14□□□□□ -2.07
CLOCKO15516 AGGF1P5-201ENST00000567900 919 ntBASIC2.14□□□□□ -2.07
CLOCKO15516 MIR3124-201ENST00000582636 67 ntBASIC2.14□□□□□ -2.07
CLOCKO15516 AC068790.3-201ENST00000602988 553 ntBASIC2.14□□□□□ -2.07
CLOCKO15516 AC091152.3-201ENST00000604227 325 ntBASIC2.14□□□□□ -2.07
CLOCKO15516 AC097468.3-201ENST00000607956 456 ntBASIC2.14□□□□□ -2.07
CLOCKO15516 AC072039.2-201ENST00000608883 439 ntBASIC2.14□□□□□ -2.07
CLOCKO15516 uc_338.14-201ENST00000613162 166 ntBASIC2.14□□□□□ -2.07
CLOCKO15516 AC011939.3-201ENST00000613686 466 ntBASIC2.14□□□□□ -2.07
CLOCKO15516 AC009090.3-201ENST00000616553 565 ntBASIC2.14□□□□□ -2.07
CLOCKO15516 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.14□□□□□ -2.07
CLOCKO15516 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CLOCKO15516 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.13□□□□□ -2.07
CLOCKO15516 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CLOCKO15516 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CLOCKO15516 SNORA4.1-201ENST00000364263 144 ntBASIC2.13□□□□□ -2.07
CLOCKO15516 RNU6-723P-201ENST00000383973 107 ntBASIC2.13□□□□□ -2.07
CLOCKO15516 RNU6-658P-201ENST00000384606 106 ntBASIC2.13□□□□□ -2.07
CLOCKO15516 RNU6-278P-201ENST00000390945 109 ntBASIC2.13□□□□□ -2.07
CLOCKO15516 NPM1P11-201ENST00000417106 855 ntBASIC2.13□□□□□ -2.07
CLOCKO15516 CYCSP48-201ENST00000417124 323 ntBASIC2.13□□□□□ -2.07
CLOCKO15516 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.13□□□□□ -2.07
CLOCKO15516 ZNF90P2-204ENST00000419323 1075 ntBASIC2.13□□□□□ -2.07
CLOCKO15516 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.13□□□□□ -2.07
CLOCKO15516 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.13□□□□□ -2.07
CLOCKO15516 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CLOCKO15516 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.13□□□□□ -2.07
CLOCKO15516 AC104651.1-201ENST00000427559 735 ntBASIC2.13□□□□□ -2.07
CLOCKO15516 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC2.13□□□□□ -2.07
CLOCKO15516 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.13□□□□□ -2.07
CLOCKO15516 MTND3P1-201ENST00000441336 220 ntBASIC2.13□□□□□ -2.07
CLOCKO15516 AL513124.1-201ENST00000450410 614 ntBASIC2.13□□□□□ -2.07
CLOCKO15516 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CLOCKO15516 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.13□□□□□ -2.07
CLOCKO15516 AC090515.1-201ENST00000465295 476 ntBASIC2.13□□□□□ -2.07
CLOCKO15516 DYNLL1P5-201ENST00000467158 270 ntBASIC2.13□□□□□ -2.07
CLOCKO15516 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.13□□□□□ -2.07
CLOCKO15516 AC004263.1-201ENST00000479327 332 ntBASIC2.13□□□□□ -2.07
CLOCKO15516 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CLOCKO15516 AC104090.1-201ENST00000506341 1171 ntBASIC2.13□□□□□ -2.07
CLOCKO15516 AC234781.5-201ENST00000508429 271 ntBASIC2.13□□□□□ -2.07
CLOCKO15516 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CLOCKO15516 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.13□□□□□ -2.07
CLOCKO15516 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
CLOCKO15516 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CLOCKO15516 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.13□□□□□ -2.07
CLOCKO15516 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.13□□□□□ -2.07
CLOCKO15516 MIR3167-201ENST00000579623 85 ntBASIC2.13□□□□□ -2.07
CLOCKO15516 MIR4293-201ENST00000584305 78 ntBASIC2.13□□□□□ -2.07
CLOCKO15516 MIR4765-201ENST00000585007 77 ntBASIC2.13□□□□□ -2.07
CLOCKO15516 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.13□□□□□ -2.07
CLOCKO15516 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.13□□□□□ -2.07
CLOCKO15516 AC002984.1-201ENST00000591692 448 ntBASIC2.13□□□□□ -2.07
CLOCKO15516 AC091057.3-201ENST00000602684 733 ntBASIC2.13□□□□□ -2.07
CLOCKO15516 APOOP1-201ENST00000604695 592 ntBASIC2.13□□□□□ -2.07
CLOCKO15516 AC069294.1-201ENST00000608397 350 ntBASIC2.13□□□□□ -2.07
CLOCKO15516 AC087241.4-201ENST00000612441 480 ntBASIC2.13□□□□□ -2.07
CLOCKO15516 MIR6766-201ENST00000622641 72 ntBASIC2.13□□□□□ -2.07
CLOCKO15516 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CLOCKO15516 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CLOCKO15516 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.12□□□□□ -2.07
CLOCKO15516 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
CLOCKO15516 NACAP2-201ENST00000318548 624 ntBASIC2.12□□□□□ -2.07
CLOCKO15516 RNU6-1284P-201ENST00000363701 100 ntBASIC2.12□□□□□ -2.07
CLOCKO15516 RNU1-91P-201ENST00000364746 163 ntBASIC2.12□□□□□ -2.07
CLOCKO15516 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.12□□□□□ -2.07
CLOCKO15516 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CLOCKO15516 U6atac.2-201ENST00000408644 118 ntBASIC2.12□□□□□ -2.07
CLOCKO15516 U3.40-201ENST00000408706 208 ntBASIC2.12□□□□□ -2.07
CLOCKO15516 RNA5SP338-201ENST00000410495 85 ntBASIC2.12□□□□□ -2.07
CLOCKO15516 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
CLOCKO15516 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC2.12□□□□□ -2.07
CLOCKO15516 RPL30P4-201ENST00000429309 333 ntBASIC2.12□□□□□ -2.07
CLOCKO15516 HMGB1P27-201ENST00000431429 603 ntBASIC2.12□□□□□ -2.07
CLOCKO15516 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms