Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 AC023158.2-201ENST00000614876 543 ntBASIC1.62□□□□□ -2.15
UBFD1O14562 AL158163.2-201ENST00000619110 700 ntBASIC1.62□□□□□ -2.15
UBFD1O14562 AL445264.1-201ENST00000621719 171 ntBASIC1.62□□□□□ -2.15
UBFD1O14562 AC084768.2-201ENST00000622736 221 ntBASIC1.62□□□□□ -2.15
UBFD1O14562 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.62□□□□□ -2.15
UBFD1O14562 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
UBFD1O14562 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.61□□□□□ -2.15
UBFD1O14562 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
UBFD1O14562 RNU6-637P-201ENST00000384050 107 ntBASIC1.61□□□□□ -2.15
UBFD1O14562 RNU6-750P-201ENST00000390946 107 ntBASIC1.61□□□□□ -2.15
UBFD1O14562 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.61□□□□□ -2.15
UBFD1O14562 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.61□□□□□ -2.15
UBFD1O14562 AC013262.1-201ENST00000426710 252 ntBASIC1.61□□□□□ -2.15
UBFD1O14562 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.61□□□□□ -2.15
UBFD1O14562 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.61□□□□□ -2.15
UBFD1O14562 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.61□□□□□ -2.15
UBFD1O14562 KLF3P2-201ENST00000465138 268 ntBASIC1.61□□□□□ -2.15
UBFD1O14562 DYNLL1P5-201ENST00000467158 270 ntBASIC1.61□□□□□ -2.15
UBFD1O14562 AC093281.2-201ENST00000510153 597 ntBASIC1.61□□□□□ -2.15
UBFD1O14562 MRPS17P9-201ENST00000511924 393 ntBASIC1.61□□□□□ -2.15
UBFD1O14562 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC1.61□□□□□ -2.15
UBFD1O14562 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC1.61□□□□□ -2.15
UBFD1O14562 SNORA31.23-201ENST00000517219 133 ntBASIC1.61□□□□□ -2.15
UBFD1O14562 RNU6-840P-201ENST00000517275 65 ntBASIC1.61□□□□□ -2.15
UBFD1O14562 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC1.61□□□□□ -2.15
UBFD1O14562 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.61□□□□□ -2.15
UBFD1O14562 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.61□□□□□ -2.15
UBFD1O14562 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.61□□□□□ -2.15
UBFD1O14562 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.61□□□□□ -2.15
UBFD1O14562 MIR3912-201ENST00000577566 105 ntBASIC1.61□□□□□ -2.15
UBFD1O14562 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC1.61□□□□□ -2.15
UBFD1O14562 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.61□□□□□ -2.15
UBFD1O14562 MIR4781-201ENST00000585250 76 ntBASIC1.61□□□□□ -2.15
UBFD1O14562 AC008121.1-201ENST00000603244 268 ntBASIC1.61□□□□□ -2.15
UBFD1O14562 AL139344.1-201ENST00000605228 195 ntBASIC1.61□□□□□ -2.15
UBFD1O14562 AC135507.1-201ENST00000607214 561 ntBASIC1.61□□□□□ -2.15
UBFD1O14562 MIR8081-201ENST00000611533 95 ntBASIC1.61□□□□□ -2.15
UBFD1O14562 AC013476.2-201ENST00000614456 459 ntBASIC1.61□□□□□ -2.15
UBFD1O14562 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.61□□□□□ -2.15
UBFD1O14562 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.61□□□□□ -2.15
UBFD1O14562 AL138713.1-201ENST00000624026 2130 ntBASIC1.61□□□□□ -2.15
UBFD1O14562 AC131280.1-202ENST00000624067 4211 ntBASIC1.61□□□□□ -2.15
UBFD1O14562 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.6□□□□□ -2.15
UBFD1O14562 MTND4P27-201ENST00000450813 1354 ntBASIC1.6□□□□□ -2.15
UBFD1O14562 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.6□□□□□ -2.15
UBFD1O14562 AC004520.1-201ENST00000608362 1413 ntBASIC1.6□□□□□ -2.15
UBFD1O14562 RNU6-1078P-201ENST00000364522 103 ntBASIC1.6□□□□□ -2.15
UBFD1O14562 snoZ40.1-201ENST00000364540 72 ntBASIC1.6□□□□□ -2.15
UBFD1O14562 RNA5SP190-201ENST00000365222 118 ntBASIC1.6□□□□□ -2.15
UBFD1O14562 RNU6-234P-201ENST00000365229 104 ntBASIC1.6□□□□□ -2.15
UBFD1O14562 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC1.6□□□□□ -2.15
UBFD1O14562 RNU6-1207P-201ENST00000384343 107 ntBASIC1.6□□□□□ -2.15
UBFD1O14562 RNU6-114P-201ENST00000384704 105 ntBASIC1.6□□□□□ -2.15
UBFD1O14562 MIR218-1-201ENST00000384999 110 ntBASIC1.6□□□□□ -2.15
UBFD1O14562 MTCO1P56-201ENST00000401674 224 ntBASIC1.6□□□□□ -2.15
UBFD1O14562 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC1.6□□□□□ -2.15
UBFD1O14562 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.6□□□□□ -2.15
UBFD1O14562 AL451054.2-201ENST00000420896 202 ntBASIC1.6□□□□□ -2.15
UBFD1O14562 AC007435.1-201ENST00000421086 415 ntBASIC1.6□□□□□ -2.15
UBFD1O14562 BPY2DP-201ENST00000422208 265 ntBASIC1.6□□□□□ -2.15
UBFD1O14562 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.6□□□□□ -2.15
UBFD1O14562 Z80107.1-201ENST00000436830 412 ntBASIC1.6□□□□□ -2.15
UBFD1O14562 COX7BP2-201ENST00000437976 242 ntBASIC1.6□□□□□ -2.15
UBFD1O14562 OR10R1P-201ENST00000441524 1141 ntBASIC1.6□□□□□ -2.15
UBFD1O14562 OSTCP8-201ENST00000445117 448 ntBASIC1.6□□□□□ -2.15
UBFD1O14562 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.6□□□□□ -2.15
UBFD1O14562 MTATP6P7-201ENST00000453315 681 ntBASIC1.6□□□□□ -2.15
UBFD1O14562 RPL26P9-201ENST00000457466 433 ntBASIC1.6□□□□□ -2.15
UBFD1O14562 snoU13.8-201ENST00000458890 104 ntBASIC1.6□□□□□ -2.15
UBFD1O14562 HMGB1P36-201ENST00000487709 576 ntBASIC1.6□□□□□ -2.15
UBFD1O14562 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC1.6□□□□□ -2.15
UBFD1O14562 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC1.6□□□□□ -2.15
UBFD1O14562 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.6□□□□□ -2.15
UBFD1O14562 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.6□□□□□ -2.15
UBFD1O14562 RNU7-193P-201ENST00000516723 65 ntBASIC1.6□□□□□ -2.15
UBFD1O14562 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.6□□□□□ -2.15
UBFD1O14562 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.6□□□□□ -2.15
UBFD1O14562 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.6□□□□□ -2.15
UBFD1O14562 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.6□□□□□ -2.15
UBFD1O14562 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.6□□□□□ -2.15
UBFD1O14562 snoU13.31-201ENST00000607291 104 ntBASIC1.6□□□□□ -2.15
UBFD1O14562 AC009237.15-201ENST00000610252 501 ntBASIC1.6□□□□□ -2.15
UBFD1O14562 AL589743.7-201ENST00000612637 233 ntBASIC1.6□□□□□ -2.15
UBFD1O14562 AC008759.3-201ENST00000613300 508 ntBASIC1.6□□□□□ -2.15
UBFD1O14562 AL159972.1-201ENST00000625150 448 ntBASIC1.6□□□□□ -2.15
UBFD1O14562 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.6□□□□□ -2.15
UBFD1O14562 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.6□□□□□ -2.15
UBFD1O14562 AL390862.1-201ENST00000635467 1469 ntBASIC1.59□□□□□ -2.15
UBFD1O14562 Y_RNA.110-201ENST00000363220 99 ntBASIC1.59□□□□□ -2.15
UBFD1O14562 Y_RNA.226-201ENST00000364337 114 ntBASIC1.59□□□□□ -2.15
UBFD1O14562 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
UBFD1O14562 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.59□□□□□ -2.15
UBFD1O14562 SKA2P1-201ENST00000425592 390 ntBASIC1.59□□□□□ -2.15
UBFD1O14562 AC010153.1-201ENST00000432862 727 ntBASIC1.59□□□□□ -2.15
UBFD1O14562 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.59□□□□□ -2.15
UBFD1O14562 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.59□□□□□ -2.15
UBFD1O14562 MTND1P31-201ENST00000449206 961 ntBASIC1.59□□□□□ -2.15
UBFD1O14562 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.59□□□□□ -2.15
UBFD1O14562 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.59□□□□□ -2.15
UBFD1O14562 BZW1P2-201ENST00000473537 826 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 244.7 ms