Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC0.67□□□□□ -2.3
CACNA1AO00555 AP1S2P1-201ENST00000457344 379 ntBASIC0.67□□□□□ -2.3
CACNA1AO00555 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC0.67□□□□□ -2.3
CACNA1AO00555 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC0.67□□□□□ -2.3
CACNA1AO00555 MTND2P13-201ENST00000577438 1039 ntBASIC0.67□□□□□ -2.3
CACNA1AO00555 MIR4512-201ENST00000583257 77 ntBASIC0.67□□□□□ -2.3
CACNA1AO00555 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.67□□□□□ -2.3
CACNA1AO00555 MIR6130-201ENST00000619419 109 ntBASIC0.67□□□□□ -2.3
CACNA1AO00555 AC068787.1-201ENST00000623908 691 ntBASIC0.67□□□□□ -2.3
CACNA1AO00555 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC0.66□□□□□ -2.3
CACNA1AO00555 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.66□□□□□ -2.3
CACNA1AO00555 RNU1-62P-201ENST00000362599 164 ntBASIC0.66□□□□□ -2.3
CACNA1AO00555 RNU6-302P-201ENST00000365249 107 ntBASIC0.66□□□□□ -2.3
CACNA1AO00555 RPL31P52-201ENST00000407532 367 ntBASIC0.66□□□□□ -2.3
CACNA1AO00555 TRAPPC2P9-201ENST00000434556 343 ntBASIC0.66□□□□□ -2.3
CACNA1AO00555 AC092628.1-201ENST00000436250 252 ntBASIC0.66□□□□□ -2.3
CACNA1AO00555 AC010683.1-201ENST00000473673 378 ntBASIC0.66□□□□□ -2.3
CACNA1AO00555 AC117454.1-201ENST00000491120 168 ntBASIC0.66□□□□□ -2.3
CACNA1AO00555 AC090142.3-201ENST00000519012 385 ntBASIC0.66□□□□□ -2.3
CACNA1AO00555 MIR4698-201ENST00000577795 80 ntBASIC0.66□□□□□ -2.3
CACNA1AO00555 Z83818.1-201ENST00000603584 150 ntBASIC0.66□□□□□ -2.3
CACNA1AO00555 AC012213.4-201ENST00000606457 354 ntBASIC0.66□□□□□ -2.3
CACNA1AO00555 AC009090.3-201ENST00000616553 565 ntBASIC0.66□□□□□ -2.3
CACNA1AO00555 AC011330.2-201ENST00000621680 635 ntBASIC0.66□□□□□ -2.3
CACNA1AO00555 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
CACNA1AO00555 AC087359.1-201ENST00000508335 1740 ntBASIC0.66□□□□□ -2.3
CACNA1AO00555 MIR17-201ENST00000385012 84 ntBASIC0.66□□□□□ -2.3
CACNA1AO00555 PTGES3P2-201ENST00000407942 482 ntBASIC0.66□□□□□ -2.3
CACNA1AO00555 AC092648.1-201ENST00000425870 423 ntBASIC0.66□□□□□ -2.3
CACNA1AO00555 AL121578.1-201ENST00000428051 892 ntBASIC0.66□□□□□ -2.3
CACNA1AO00555 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC0.66□□□□□ -2.3
CACNA1AO00555 AC069277.2-201ENST00000454211 432 ntBASIC0.66□□□□□ -2.3
CACNA1AO00555 AC090115.3-201ENST00000553218 849 ntBASIC0.66□□□□□ -2.3
CACNA1AO00555 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
CACNA1AO00555 AL355297.3-201ENST00000604082 446 ntBASIC0.66□□□□□ -2.3
CACNA1AO00555 SNORA23-201ENST00000365128 182 ntBASIC0.65□□□□□ -2.31
CACNA1AO00555 AL356432.1-201ENST00000405809 419 ntBASIC0.65□□□□□ -2.31
CACNA1AO00555 RSL24D1P8-201ENST00000434442 492 ntBASIC0.65□□□□□ -2.31
CACNA1AO00555 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC0.65□□□□□ -2.31
CACNA1AO00555 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.65□□□□□ -2.31
CACNA1AO00555 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC0.65□□□□□ -2.31
CACNA1AO00555 HMGB1P46-201ENST00000520062 610 ntBASIC0.65□□□□□ -2.31
CACNA1AO00555 SUB1P1-201ENST00000524415 382 ntBASIC0.65□□□□□ -2.31
CACNA1AO00555 NBEAP1-201ENST00000554452 979 ntBASIC0.65□□□□□ -2.31
CACNA1AO00555 AC090116.1-201ENST00000615679 446 ntBASIC0.65□□□□□ -2.31
CACNA1AO00555 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC0.65□□□□□ -2.31
CACNA1AO00555 AL589994.1-201ENST00000404962 340 ntBASIC0.65□□□□□ -2.31
CACNA1AO00555 RPS20P15-201ENST00000412792 311 ntBASIC0.65□□□□□ -2.31
CACNA1AO00555 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.65□□□□□ -2.31
CACNA1AO00555 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC0.65□□□□□ -2.31
CACNA1AO00555 AL353898.1-201ENST00000444055 238 ntBASIC0.65□□□□□ -2.31
CACNA1AO00555 AC097493.1-201ENST00000463958 372 ntBASIC0.65□□□□□ -2.31
CACNA1AO00555 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC0.65□□□□□ -2.31
CACNA1AO00555 AL121839.1-201ENST00000556233 1185 ntBASIC0.65□□□□□ -2.31
CACNA1AO00555 AC008749.1-201ENST00000597650 306 ntBASIC0.65□□□□□ -2.31
CACNA1AO00555 AC009220.3-201ENST00000604318 586 ntBASIC0.65□□□□□ -2.31
CACNA1AO00555 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC0.65□□□□□ -2.31
CACNA1AO00555 CFTRP2-201ENST00000634304 199 ntBASIC0.65□□□□□ -2.31
CACNA1AO00555 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC0.65□□□□□ -2.31
CACNA1AO00555 MIR1285-2-201ENST00000408311 88 ntBASIC0.64□□□□□ -2.31
CACNA1AO00555 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC0.64□□□□□ -2.31
CACNA1AO00555 OR6K5P-201ENST00000447050 945 ntBASIC0.64□□□□□ -2.31
CACNA1AO00555 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC0.64□□□□□ -2.31
CACNA1AO00555 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC0.64□□□□□ -2.31
CACNA1AO00555 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC0.64□□□□□ -2.31
CACNA1AO00555 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.64□□□□□ -2.31
CACNA1AO00555 LLPHP1-201ENST00000603571 367 ntBASIC0.64□□□□□ -2.31
CACNA1AO00555 AC073111.2-201ENST00000605657 1075 ntBASIC0.64□□□□□ -2.31
CACNA1AO00555 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC0.64□□□□□ -2.31
CACNA1AO00555 AC090425.2-201ENST00000608818 501 ntBASIC0.64□□□□□ -2.31
CACNA1AO00555 MTND5P11-201ENST00000511037 1812 ntBASIC0.64□□□□□ -2.31
CACNA1AO00555 RNU6-46P-201ENST00000383860 107 ntBASIC0.64□□□□□ -2.31
CACNA1AO00555 RNU6-225P-201ENST00000384613 103 ntBASIC0.64□□□□□ -2.31
CACNA1AO00555 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC0.64□□□□□ -2.31
CACNA1AO00555 AC093155.1-201ENST00000440164 826 ntBASIC0.64□□□□□ -2.31
CACNA1AO00555 ELOCP10-201ENST00000440624 327 ntBASIC0.64□□□□□ -2.31
CACNA1AO00555 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC0.64□□□□□ -2.31
CACNA1AO00555 AC245128.3-201ENST00000594721 748 ntBASIC0.64□□□□□ -2.31
CACNA1AO00555 ELOCP34-201ENST00000604436 327 ntBASIC0.64□□□□□ -2.31
CACNA1AO00555 AC245884.12-201ENST00000615364 59 ntBASIC0.64□□□□□ -2.31
CACNA1AO00555 AC079597.1-201ENST00000624306 508 ntBASIC0.64□□□□□ -2.31
CACNA1AO00555 AC110792.3-201ENST00000595906 1614 ntBASIC0.63□□□□□ -2.31
CACNA1AO00555 SNORD49B-201ENST00000365172 72 ntBASIC0.63□□□□□ -2.31
CACNA1AO00555 MIR224-201ENST00000384889 81 ntBASIC0.63□□□□□ -2.31
CACNA1AO00555 MIR150-201ENST00000385048 84 ntBASIC0.63□□□□□ -2.31
CACNA1AO00555 MIR524-201ENST00000385242 87 ntBASIC0.63□□□□□ -2.31
CACNA1AO00555 MIR938-201ENST00000401216 83 ntBASIC0.63□□□□□ -2.31
CACNA1AO00555 RNU6-1218P-201ENST00000458990 108 ntBASIC0.63□□□□□ -2.31
CACNA1AO00555 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC0.63□□□□□ -2.31
CACNA1AO00555 AC105252.1-201ENST00000503089 286 ntBASIC0.63□□□□□ -2.31
CACNA1AO00555 MTND3P24-201ENST00000506306 329 ntBASIC0.63□□□□□ -2.31
CACNA1AO00555 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC0.63□□□□□ -2.31
CACNA1AO00555 AC067838.1-201ENST00000606064 577 ntBASIC0.63□□□□□ -2.31
CACNA1AO00555 AC019131.2-201ENST00000609071 870 ntBASIC0.63□□□□□ -2.31
CACNA1AO00555 AL162373.1-201ENST00000620433 407 ntBASIC0.63□□□□□ -2.31
CACNA1AO00555 AL596211.1-201ENST00000569873 2277 ntBASIC0.63□□□□□ -2.31
CACNA1AO00555 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
CACNA1AO00555 RNU1-58P-201ENST00000362413 163 ntBASIC0.63□□□□□ -2.31
CACNA1AO00555 SNORD3E-201ENST00000362899 217 ntBASIC0.63□□□□□ -2.31
CACNA1AO00555 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms