Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
TRBV4-1A0A0J9YWV2 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.68□□□□□ -1.98
TRBV4-1A0A0J9YWV2 Y_RNA.3-201ENST00000362331 103 ntBASIC2.68□□□□□ -1.98
TRBV4-1A0A0J9YWV2 RNU4-48P-201ENST00000365559 182 ntBASIC2.68□□□□□ -1.98
TRBV4-1A0A0J9YWV2 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
TRBV4-1A0A0J9YWV2 MIR183-201ENST00000384958 110 ntBASIC2.68□□□□□ -1.98
TRBV4-1A0A0J9YWV2 RNU6-387P-201ENST00000411331 105 ntBASIC2.68□□□□□ -1.98
TRBV4-1A0A0J9YWV2 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
TRBV4-1A0A0J9YWV2 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.68□□□□□ -1.98
TRBV4-1A0A0J9YWV2 AC099548.1-201ENST00000421443 426 ntBASIC2.68□□□□□ -1.98
TRBV4-1A0A0J9YWV2 AL592045.1-201ENST00000429867 352 ntBASIC2.68□□□□□ -1.98
TRBV4-1A0A0J9YWV2 AL714022.1-201ENST00000439897 151 ntBASIC2.68□□□□□ -1.98
TRBV4-1A0A0J9YWV2 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
TRBV4-1A0A0J9YWV2 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.68□□□□□ -1.98
TRBV4-1A0A0J9YWV2 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.68□□□□□ -1.98
TRBV4-1A0A0J9YWV2 RPS3AP14-201ENST00000483907 780 ntBASIC2.68□□□□□ -1.98
TRBV4-1A0A0J9YWV2 AC079382.1-201ENST00000493346 557 ntBASIC2.68□□□□□ -1.98
TRBV4-1A0A0J9YWV2 RNU6-914P-201ENST00000516749 109 ntBASIC2.68□□□□□ -1.98
TRBV4-1A0A0J9YWV2 RNU6-685P-201ENST00000517088 95 ntBASIC2.68□□□□□ -1.98
TRBV4-1A0A0J9YWV2 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.68□□□□□ -1.98
TRBV4-1A0A0J9YWV2 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.68□□□□□ -1.98
TRBV4-1A0A0J9YWV2 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
TRBV4-1A0A0J9YWV2 OR4R1P-201ENST00000529879 463 ntBASIC2.68□□□□□ -1.98
TRBV4-1A0A0J9YWV2 AP003034.1-201ENST00000534621 422 ntBASIC2.68□□□□□ -1.98
TRBV4-1A0A0J9YWV2 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.68□□□□□ -1.98
TRBV4-1A0A0J9YWV2 AC034105.4-201ENST00000568304 277 ntBASIC2.68□□□□□ -1.98
TRBV4-1A0A0J9YWV2 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.68□□□□□ -1.98
TRBV4-1A0A0J9YWV2 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.68□□□□□ -1.98
TRBV4-1A0A0J9YWV2 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.68□□□□□ -1.98
TRBV4-1A0A0J9YWV2 AC008521.1-201ENST00000587471 187 ntBASIC2.68□□□□□ -1.98
TRBV4-1A0A0J9YWV2 BNIP3P9-201ENST00000603714 553 ntBASIC2.68□□□□□ -1.98
TRBV4-1A0A0J9YWV2 AC004805.2-201ENST00000605382 482 ntBASIC2.68□□□□□ -1.98
TRBV4-1A0A0J9YWV2 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.68□□□□□ -1.98
TRBV4-1A0A0J9YWV2 AC069234.5-201ENST00000611056 416 ntBASIC2.68□□□□□ -1.98
TRBV4-1A0A0J9YWV2 AC084782.3-201ENST00000612282 578 ntBASIC2.68□□□□□ -1.98
TRBV4-1A0A0J9YWV2 AL359547.2-201ENST00000615810 418 ntBASIC2.68□□□□□ -1.98
TRBV4-1A0A0J9YWV2 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
TRBV4-1A0A0J9YWV2 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.68□□□□□ -1.98
TRBV4-1A0A0J9YWV2 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
TRBV4-1A0A0J9YWV2 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
TRBV4-1A0A0J9YWV2 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
TRBV4-1A0A0J9YWV2 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
TRBV4-1A0A0J9YWV2 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
TRBV4-1A0A0J9YWV2 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.67□□□□□ -1.98
TRBV4-1A0A0J9YWV2 MAPK10-266ENST00000641066 6555 ntBASIC2.67□□□□□ -1.98
TRBV4-1A0A0J9YWV2 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
TRBV4-1A0A0J9YWV2 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
TRBV4-1A0A0J9YWV2 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.67□□□□□ -1.98
TRBV4-1A0A0J9YWV2 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
TRBV4-1A0A0J9YWV2 ZNF680P1-201ENST00000436625 1469 ntBASIC2.67□□□□□ -1.98
TRBV4-1A0A0J9YWV2 SNORD115-7-201ENST00000365306 82 ntBASIC2.67□□□□□ -1.98
TRBV4-1A0A0J9YWV2 RN7SKP220-201ENST00000410611 288 ntBASIC2.67□□□□□ -1.98
TRBV4-1A0A0J9YWV2 RNA5SP344-201ENST00000411081 104 ntBASIC2.67□□□□□ -1.98
TRBV4-1A0A0J9YWV2 AC080125.1-201ENST00000414888 684 ntBASIC2.67□□□□□ -1.98
TRBV4-1A0A0J9YWV2 OR51A5P-201ENST00000415429 942 ntBASIC2.67□□□□□ -1.98
TRBV4-1A0A0J9YWV2 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.67□□□□□ -1.98
TRBV4-1A0A0J9YWV2 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.67□□□□□ -1.98
TRBV4-1A0A0J9YWV2 MRPL50P2-201ENST00000416821 482 ntBASIC2.67□□□□□ -1.98
TRBV4-1A0A0J9YWV2 AL353193.1-201ENST00000421444 268 ntBASIC2.67□□□□□ -1.98
TRBV4-1A0A0J9YWV2 AC069157.1-201ENST00000421749 137 ntBASIC2.67□□□□□ -1.98
TRBV4-1A0A0J9YWV2 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
TRBV4-1A0A0J9YWV2 MTND3P21-201ENST00000433774 331 ntBASIC2.67□□□□□ -1.98
TRBV4-1A0A0J9YWV2 AC006028.1-201ENST00000438379 402 ntBASIC2.67□□□□□ -1.98
TRBV4-1A0A0J9YWV2 MTND1P34-201ENST00000438556 671 ntBASIC2.67□□□□□ -1.98
TRBV4-1A0A0J9YWV2 DDX3P2-201ENST00000446138 111 ntBASIC2.67□□□□□ -1.98
TRBV4-1A0A0J9YWV2 RPL12P25-201ENST00000455592 494 ntBASIC2.67□□□□□ -1.98
TRBV4-1A0A0J9YWV2 snoU13.28-201ENST00000459235 104 ntBASIC2.67□□□□□ -1.98
TRBV4-1A0A0J9YWV2 AC034236.1-201ENST00000469891 373 ntBASIC2.67□□□□□ -1.98
TRBV4-1A0A0J9YWV2 SUMO2P6-201ENST00000505273 288 ntBASIC2.67□□□□□ -1.98
TRBV4-1A0A0J9YWV2 AC109927.2-201ENST00000506416 303 ntBASIC2.67□□□□□ -1.98
TRBV4-1A0A0J9YWV2 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.67□□□□□ -1.98
TRBV4-1A0A0J9YWV2 RNA5SP165-201ENST00000517142 115 ntBASIC2.67□□□□□ -1.98
TRBV4-1A0A0J9YWV2 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.67□□□□□ -1.98
TRBV4-1A0A0J9YWV2 AP003122.3-201ENST00000526316 255 ntBASIC2.67□□□□□ -1.98
TRBV4-1A0A0J9YWV2 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.67□□□□□ -1.98
TRBV4-1A0A0J9YWV2 AC084851.1-201ENST00000529105 249 ntBASIC2.67□□□□□ -1.98
TRBV4-1A0A0J9YWV2 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
TRBV4-1A0A0J9YWV2 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.67□□□□□ -1.98
TRBV4-1A0A0J9YWV2 AC068135.2-201ENST00000569293 1028 ntBASIC2.67□□□□□ -1.98
TRBV4-1A0A0J9YWV2 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.67□□□□□ -1.98
TRBV4-1A0A0J9YWV2 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.67□□□□□ -1.98
TRBV4-1A0A0J9YWV2 MIR15A-201ENST00000607334 83 ntBASIC2.67□□□□□ -1.98
TRBV4-1A0A0J9YWV2 AL158209.2-201ENST00000619266 216 ntBASIC2.67□□□□□ -1.98
TRBV4-1A0A0J9YWV2 AC010338.1-201ENST00000621823 717 ntBASIC2.67□□□□□ -1.98
TRBV4-1A0A0J9YWV2 AC011155.2-201ENST00000623202 216 ntBASIC2.67□□□□□ -1.98
TRBV4-1A0A0J9YWV2 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.67□□□□□ -1.98
TRBV4-1A0A0J9YWV2 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.67□□□□□ -1.98
TRBV4-1A0A0J9YWV2 MIR6863-201ENST00000636112 90 ntBASIC2.67□□□□□ -1.98
TRBV4-1A0A0J9YWV2 Z99571.1-201ENST00000636677 394 ntBASIC2.67□□□□□ -1.98
TRBV4-1A0A0J9YWV2 U2.21-201ENST00000637295 81 ntBASIC2.67□□□□□ -1.98
TRBV4-1A0A0J9YWV2 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.67□□□□□ -1.98
TRBV4-1A0A0J9YWV2 AL161431.1-201ENST00000618966 4205 ntBASIC2.66□□□□□ -1.98
TRBV4-1A0A0J9YWV2 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
TRBV4-1A0A0J9YWV2 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
TRBV4-1A0A0J9YWV2 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
TRBV4-1A0A0J9YWV2 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
TRBV4-1A0A0J9YWV2 SNORA62.1-201ENST00000364287 154 ntBASIC2.66□□□□□ -1.98
TRBV4-1A0A0J9YWV2 SNORA62.3-201ENST00000365110 153 ntBASIC2.66□□□□□ -1.98
TRBV4-1A0A0J9YWV2 Y_RNA.576-201ENST00000384781 102 ntBASIC2.66□□□□□ -1.98
TRBV4-1A0A0J9YWV2 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms