Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 AP000867.2-201ENST00000532468 320 ntBASIC1.91□□□□□ -2.1
TRAV40A0A0B4J280 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC1.91□□□□□ -2.1
TRAV40A0A0B4J280 AC025281.1-201ENST00000567026 265 ntBASIC1.91□□□□□ -2.1
TRAV40A0A0B4J280 AC105137.2-201ENST00000569073 466 ntBASIC1.91□□□□□ -2.1
TRAV40A0A0B4J280 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.91□□□□□ -2.1
TRAV40A0A0B4J280 MIR3124-201ENST00000582636 67 ntBASIC1.91□□□□□ -2.1
TRAV40A0A0B4J280 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC1.91□□□□□ -2.1
TRAV40A0A0B4J280 AC009977.1-201ENST00000586015 570 ntBASIC1.91□□□□□ -2.1
TRAV40A0A0B4J280 AC098614.4-201ENST00000607601 462 ntBASIC1.91□□□□□ -2.1
TRAV40A0A0B4J280 UBE2Q2P6-201ENST00000612666 153 ntBASIC1.91□□□□□ -2.1
TRAV40A0A0B4J280 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.91□□□□□ -2.1
TRAV40A0A0B4J280 SDR42E1P2-201ENST00000614861 481 ntBASIC1.91□□□□□ -2.1
TRAV40A0A0B4J280 AL603839.4-201ENST00000624658 1005 ntBASIC1.91□□□□□ -2.1
TRAV40A0A0B4J280 VPS8-228ENST00000628962 207 ntTSL 5 BASIC1.91□□□□□ -2.1
TRAV40A0A0B4J280 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC1.91□□□□□ -2.1
TRAV40A0A0B4J280 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC1.91□□□□□ -2.1
TRAV40A0A0B4J280 AC092435.3-201ENST00000565538 3654 ntBASIC1.9□□□□□ -2.11
TRAV40A0A0B4J280 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.9□□□□□ -2.11
TRAV40A0A0B4J280 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
TRAV40A0A0B4J280 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.9□□□□□ -2.11
TRAV40A0A0B4J280 RNU5E-1-201ENST00000362477 120 ntBASIC1.9□□□□□ -2.11
TRAV40A0A0B4J280 RNU6-188P-201ENST00000364207 107 ntBASIC1.9□□□□□ -2.11
TRAV40A0A0B4J280 RNU6-701P-201ENST00000384059 107 ntBASIC1.9□□□□□ -2.11
TRAV40A0A0B4J280 AL359634.1-202ENST00000404721 284 ntBASIC1.9□□□□□ -2.11
TRAV40A0A0B4J280 RNU6-1077P-201ENST00000410506 102 ntBASIC1.9□□□□□ -2.11
TRAV40A0A0B4J280 RPS15AP12-201ENST00000419498 388 ntBASIC1.9□□□□□ -2.11
TRAV40A0A0B4J280 HSPE1P1-201ENST00000421494 318 ntBASIC1.9□□□□□ -2.11
TRAV40A0A0B4J280 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.9□□□□□ -2.11
TRAV40A0A0B4J280 AL121890.1-201ENST00000435457 205 ntBASIC1.9□□□□□ -2.11
TRAV40A0A0B4J280 RPS12P2-201ENST00000439728 269 ntBASIC1.9□□□□□ -2.11
TRAV40A0A0B4J280 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
TRAV40A0A0B4J280 PGBD4P3-201ENST00000440731 581 ntBASIC1.9□□□□□ -2.11
TRAV40A0A0B4J280 BNIP3P2-201ENST00000441221 577 ntBASIC1.9□□□□□ -2.11
TRAV40A0A0B4J280 AL121871.1-201ENST00000443413 436 ntBASIC1.9□□□□□ -2.11
TRAV40A0A0B4J280 AC009237.8-201ENST00000445492 379 ntBASIC1.9□□□□□ -2.11
TRAV40A0A0B4J280 USP9YP12-201ENST00000450481 570 ntBASIC1.9□□□□□ -2.11
TRAV40A0A0B4J280 AC098826.2-201ENST00000452011 651 ntBASIC1.9□□□□□ -2.11
TRAV40A0A0B4J280 MTND1P9-201ENST00000453775 944 ntBASIC1.9□□□□□ -2.11
TRAV40A0A0B4J280 RPL12P25-201ENST00000455592 494 ntBASIC1.9□□□□□ -2.11
TRAV40A0A0B4J280 SNRPGP9-201ENST00000456025 225 ntBASIC1.9□□□□□ -2.11
TRAV40A0A0B4J280 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.9□□□□□ -2.11
TRAV40A0A0B4J280 RNU7-59P-201ENST00000459101 61 ntBASIC1.9□□□□□ -2.11
TRAV40A0A0B4J280 snoU13.28-201ENST00000459235 104 ntBASIC1.9□□□□□ -2.11
TRAV40A0A0B4J280 RPS20P20-201ENST00000460498 340 ntBASIC1.9□□□□□ -2.11
TRAV40A0A0B4J280 MTND1P3-201ENST00000484956 952 ntBASIC1.9□□□□□ -2.11
TRAV40A0A0B4J280 RPS29P20-201ENST00000489592 171 ntBASIC1.9□□□□□ -2.11
TRAV40A0A0B4J280 RPL23AP49-201ENST00000492925 468 ntBASIC1.9□□□□□ -2.11
TRAV40A0A0B4J280 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
TRAV40A0A0B4J280 MTND1P22-201ENST00000510572 951 ntBASIC1.9□□□□□ -2.11
TRAV40A0A0B4J280 AC010486.3-201ENST00000511602 785 ntBASIC1.9□□□□□ -2.11
TRAV40A0A0B4J280 AC117532.1-201ENST00000514638 323 ntBASIC1.9□□□□□ -2.11
TRAV40A0A0B4J280 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.9□□□□□ -2.11
TRAV40A0A0B4J280 FABP5P5-201ENST00000515537 406 ntBASIC1.9□□□□□ -2.11
TRAV40A0A0B4J280 RNU1-41P-201ENST00000516161 162 ntBASIC1.9□□□□□ -2.11
TRAV40A0A0B4J280 RNU1-48P-201ENST00000516400 162 ntBASIC1.9□□□□□ -2.11
TRAV40A0A0B4J280 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.9□□□□□ -2.11
TRAV40A0A0B4J280 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.9□□□□□ -2.11
TRAV40A0A0B4J280 MTCYBP20-201ENST00000524239 1129 ntBASIC1.9□□□□□ -2.11
TRAV40A0A0B4J280 HSPE1P20-201ENST00000538133 289 ntBASIC1.9□□□□□ -2.11
TRAV40A0A0B4J280 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.9□□□□□ -2.11
TRAV40A0A0B4J280 AC124947.2-202ENST00000552735 133 ntBASIC1.9□□□□□ -2.11
TRAV40A0A0B4J280 MIR3921-201ENST00000577308 85 ntBASIC1.9□□□□□ -2.11
TRAV40A0A0B4J280 MIR4474-201ENST00000579189 78 ntBASIC1.9□□□□□ -2.11
TRAV40A0A0B4J280 AC104984.5-201ENST00000586878 94 ntBASIC1.9□□□□□ -2.11
TRAV40A0A0B4J280 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
TRAV40A0A0B4J280 AC119751.7-201ENST00000600494 245 ntBASIC1.9□□□□□ -2.11
TRAV40A0A0B4J280 AC010620.1-201ENST00000601088 1102 ntBASIC1.9□□□□□ -2.11
TRAV40A0A0B4J280 AC112191.3-201ENST00000604371 277 ntBASIC1.9□□□□□ -2.11
TRAV40A0A0B4J280 AC004908.2-201ENST00000609090 574 ntBASIC1.9□□□□□ -2.11
TRAV40A0A0B4J280 AC138749.5-201ENST00000611461 208 ntBASIC1.9□□□□□ -2.11
TRAV40A0A0B4J280 AL137847.3-201ENST00000611521 109 ntBASIC1.9□□□□□ -2.11
TRAV40A0A0B4J280 AC073114.1-201ENST00000612027 490 ntBASIC1.9□□□□□ -2.11
TRAV40A0A0B4J280 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
TRAV40A0A0B4J280 AC116165.2-201ENST00000616705 206 ntBASIC1.9□□□□□ -2.11
TRAV40A0A0B4J280 SNHG22-203ENST00000617833 660 ntBASIC1.9□□□□□ -2.11
TRAV40A0A0B4J280 MIR3974-201ENST00000637126 96 ntBASIC1.9□□□□□ -2.11
TRAV40A0A0B4J280 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.9□□□□□ -2.11
TRAV40A0A0B4J280 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC1.9□□□□□ -2.11
TRAV40A0A0B4J280 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC1.9□□□□□ -2.11
TRAV40A0A0B4J280 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
TRAV40A0A0B4J280 MTND4P4-201ENST00000439033 1366 ntBASIC1.89□□□□□ -2.11
TRAV40A0A0B4J280 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
TRAV40A0A0B4J280 RNA5SP295-201ENST00000362655 121 ntBASIC1.89□□□□□ -2.11
TRAV40A0A0B4J280 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
TRAV40A0A0B4J280 RNU1-109P-201ENST00000383960 147 ntBASIC1.89□□□□□ -2.11
TRAV40A0A0B4J280 RNU6-39P-201ENST00000384344 107 ntBASIC1.89□□□□□ -2.11
TRAV40A0A0B4J280 FAT1P1-201ENST00000406588 507 ntBASIC1.89□□□□□ -2.11
TRAV40A0A0B4J280 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC1.89□□□□□ -2.11
TRAV40A0A0B4J280 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.89□□□□□ -2.11
TRAV40A0A0B4J280 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.89□□□□□ -2.11
TRAV40A0A0B4J280 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC1.89□□□□□ -2.11
TRAV40A0A0B4J280 CBWD4P-201ENST00000445695 655 ntBASIC1.89□□□□□ -2.11
TRAV40A0A0B4J280 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.89□□□□□ -2.11
TRAV40A0A0B4J280 AC020550.1-201ENST00000447385 163 ntBASIC1.89□□□□□ -2.11
TRAV40A0A0B4J280 AL590664.1-201ENST00000448065 339 ntBASIC1.89□□□□□ -2.11
TRAV40A0A0B4J280 SSXP1-201ENST00000453640 473 ntBASIC1.89□□□□□ -2.11
TRAV40A0A0B4J280 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC1.89□□□□□ -2.11
TRAV40A0A0B4J280 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.89□□□□□ -2.11
TRAV40A0A0B4J280 RPL30P14-201ENST00000482744 348 ntBASIC1.89□□□□□ -2.11
TRAV40A0A0B4J280 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms