Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
CCDC187A0A096LP49 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
CCDC187A0A096LP49 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC187A0A096LP49 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC187A0A096LP49 RNA5SP50-201ENST00000363731 107 ntBASIC3.58□□□□□ -1.84
CCDC187A0A096LP49 Y_RNA.216-201ENST00000364205 93 ntBASIC3.58□□□□□ -1.84
CCDC187A0A096LP49 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC187A0A096LP49 RNU6-190P-201ENST00000384154 102 ntBASIC3.58□□□□□ -1.84
CCDC187A0A096LP49 RNU6-474P-201ENST00000384243 107 ntBASIC3.58□□□□□ -1.84
CCDC187A0A096LP49 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.58□□□□□ -1.84
CCDC187A0A096LP49 MIR548P-201ENST00000408336 84 ntBASIC3.58□□□□□ -1.84
CCDC187A0A096LP49 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC187A0A096LP49 RNU6-193P-201ENST00000410977 107 ntBASIC3.58□□□□□ -1.84
CCDC187A0A096LP49 RNA5SP306-201ENST00000411087 107 ntBASIC3.58□□□□□ -1.84
CCDC187A0A096LP49 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC187A0A096LP49 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC187A0A096LP49 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.58□□□□□ -1.84
CCDC187A0A096LP49 SNORA71B-202ENST00000439232 272 ntBASIC3.58□□□□□ -1.84
CCDC187A0A096LP49 IPO7P1-201ENST00000442031 636 ntBASIC3.58□□□□□ -1.84
CCDC187A0A096LP49 FABP5P13-201ENST00000452144 328 ntBASIC3.58□□□□□ -1.84
CCDC187A0A096LP49 Y_RNA.639-201ENST00000458981 102 ntBASIC3.58□□□□□ -1.84
CCDC187A0A096LP49 EIF4EP3-201ENST00000498782 656 ntBASIC3.58□□□□□ -1.84
CCDC187A0A096LP49 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC187A0A096LP49 AC104806.1-201ENST00000508720 308 ntBASIC3.58□□□□□ -1.84
CCDC187A0A096LP49 AC098591.2-201ENST00000510152 315 ntBASIC3.58□□□□□ -1.84
CCDC187A0A096LP49 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC187A0A096LP49 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC187A0A096LP49 RNU4-29P-201ENST00000515943 174 ntBASIC3.58□□□□□ -1.84
CCDC187A0A096LP49 RNU1-61P-201ENST00000516107 151 ntBASIC3.58□□□□□ -1.84
CCDC187A0A096LP49 RNU6-927P-201ENST00000516199 100 ntBASIC3.58□□□□□ -1.84
CCDC187A0A096LP49 SCARNA15.2-201ENST00000516409 127 ntBASIC3.58□□□□□ -1.84
CCDC187A0A096LP49 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC187A0A096LP49 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.58□□□□□ -1.84
CCDC187A0A096LP49 SUB1P1-201ENST00000524415 382 ntBASIC3.58□□□□□ -1.84
CCDC187A0A096LP49 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.58□□□□□ -1.84
CCDC187A0A096LP49 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.58□□□□□ -1.84
CCDC187A0A096LP49 AC023050.3-201ENST00000541142 333 ntBASIC3.58□□□□□ -1.84
CCDC187A0A096LP49 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC187A0A096LP49 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC187A0A096LP49 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.58□□□□□ -1.84
CCDC187A0A096LP49 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC187A0A096LP49 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC187A0A096LP49 SNRPGP17-201ENST00000603780 214 ntBASIC3.58□□□□□ -1.84
CCDC187A0A096LP49 AC012409.4-201ENST00000612923 249 ntBASIC3.58□□□□□ -1.84
CCDC187A0A096LP49 AC009248.2-201ENST00000619826 254 ntBASIC3.58□□□□□ -1.84
CCDC187A0A096LP49 RMST_7.1-201ENST00000621935 268 ntBASIC3.58□□□□□ -1.84
CCDC187A0A096LP49 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.58□□□□□ -1.84
CCDC187A0A096LP49 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC187A0A096LP49 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.58□□□□□ -1.84
CCDC187A0A096LP49 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC187A0A096LP49 OR4G2P-202ENST00000641004 1759 ntBASIC3.58□□□□□ -1.84
CCDC187A0A096LP49 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC187A0A096LP49 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC187A0A096LP49 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.58□□□□□ -1.84
CCDC187A0A096LP49 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.57□□□□□ -1.84
CCDC187A0A096LP49 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
CCDC187A0A096LP49 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC187A0A096LP49 RNU6-1287P-201ENST00000362914 107 ntBASIC3.57□□□□□ -1.84
CCDC187A0A096LP49 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC187A0A096LP49 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC187A0A096LP49 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC187A0A096LP49 RNU1-89P-201ENST00000384592 164 ntBASIC3.57□□□□□ -1.84
CCDC187A0A096LP49 RNU6-14P-201ENST00000384630 106 ntBASIC3.57□□□□□ -1.84
CCDC187A0A096LP49 RNU6-1060P-201ENST00000384664 107 ntBASIC3.57□□□□□ -1.84
CCDC187A0A096LP49 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.57□□□□□ -1.84
CCDC187A0A096LP49 RNU4-46P-201ENST00000410818 138 ntBASIC3.57□□□□□ -1.84
CCDC187A0A096LP49 OR6C66P-201ENST00000414917 930 ntBASIC3.57□□□□□ -1.84
CCDC187A0A096LP49 SRIP2-201ENST00000428470 166 ntBASIC3.57□□□□□ -1.84
CCDC187A0A096LP49 AL356867.1-201ENST00000429623 299 ntBASIC3.57□□□□□ -1.84
CCDC187A0A096LP49 HMGB1P27-201ENST00000431429 603 ntBASIC3.57□□□□□ -1.84
CCDC187A0A096LP49 AC073063.1-201ENST00000434352 607 ntBASIC3.57□□□□□ -1.84
CCDC187A0A096LP49 MTND4P14-201ENST00000435799 1354 ntBASIC3.57□□□□□ -1.84
CCDC187A0A096LP49 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC187A0A096LP49 AL118520.1-201ENST00000450770 291 ntBASIC3.57□□□□□ -1.84
CCDC187A0A096LP49 ASNSP3-201ENST00000451989 1306 ntBASIC3.57□□□□□ -1.84
CCDC187A0A096LP49 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC187A0A096LP49 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC187A0A096LP49 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC187A0A096LP49 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC187A0A096LP49 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC187A0A096LP49 RNU6-685P-201ENST00000517088 95 ntBASIC3.57□□□□□ -1.84
CCDC187A0A096LP49 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC187A0A096LP49 SUMO2P20-201ENST00000520803 283 ntBASIC3.57□□□□□ -1.84
CCDC187A0A096LP49 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.57□□□□□ -1.84
CCDC187A0A096LP49 AC107953.1-201ENST00000522216 297 ntBASIC3.57□□□□□ -1.84
CCDC187A0A096LP49 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC187A0A096LP49 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC187A0A096LP49 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.57□□□□□ -1.84
CCDC187A0A096LP49 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC187A0A096LP49 SCOCP1-201ENST00000554676 349 ntBASIC3.57□□□□□ -1.84
CCDC187A0A096LP49 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.57□□□□□ -1.84
CCDC187A0A096LP49 AC008521.1-201ENST00000587471 187 ntBASIC3.57□□□□□ -1.84
CCDC187A0A096LP49 AC010525.2-201ENST00000590920 195 ntBASIC3.57□□□□□ -1.84
CCDC187A0A096LP49 AC243960.4-201ENST00000600532 288 ntBASIC3.57□□□□□ -1.84
CCDC187A0A096LP49 uc_338.5-201ENST00000611839 155 ntBASIC3.57□□□□□ -1.84
CCDC187A0A096LP49 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
CCDC187A0A096LP49 TTK-211ENST00000627129 240 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC187A0A096LP49 OR4G1P-203ENST00000641984 1631 ntBASIC3.57□□□□□ -1.84
CCDC187A0A096LP49 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
CCDC187A0A096LP49 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms