Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.09□□□□□ -2.23
HLA-DRB4X5D2U9 AC084033.1-201ENST00000550830 633 ntBASIC1.09□□□□□ -2.23
HLA-DRB4X5D2U9 AC008269.2-201ENST00000561915 1105 ntBASIC1.09□□□□□ -2.23
HLA-DRB4X5D2U9 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC1.09□□□□□ -2.23
HLA-DRB4X5D2U9 DUXAP11-201ENST00000603858 526 ntBASIC1.09□□□□□ -2.23
HLA-DRB4X5D2U9 AC104763.2-201ENST00000604179 382 ntBASIC1.09□□□□□ -2.23
HLA-DRB4X5D2U9 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC1.09□□□□□ -2.23
HLA-DRB4X5D2U9 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC1.09□□□□□ -2.23
HLA-DRB4X5D2U9 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.09□□□□□ -2.23
HLA-DRB4X5D2U9 AC090617.9-201ENST00000623751 147 ntBASIC1.09□□□□□ -2.23
HLA-DRB4X5D2U9 AC007490.1-201ENST00000624321 703 ntBASIC1.09□□□□□ -2.23
HLA-DRB4X5D2U9 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
HLA-DRB4X5D2U9 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.09□□□□□ -2.24
HLA-DRB4X5D2U9 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.09□□□□□ -2.24
HLA-DRB4X5D2U9 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.09□□□□□ -2.24
HLA-DRB4X5D2U9 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.08□□□□□ -2.24
HLA-DRB4X5D2U9 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
HLA-DRB4X5D2U9 RNU6-338P-201ENST00000383888 105 ntBASIC1.08□□□□□ -2.24
HLA-DRB4X5D2U9 RNU6-40P-201ENST00000384254 107 ntBASIC1.08□□□□□ -2.24
HLA-DRB4X5D2U9 MIR764-201ENST00000390811 85 ntBASIC1.08□□□□□ -2.24
HLA-DRB4X5D2U9 SNRPEP2-201ENST00000397592 279 ntBASIC1.08□□□□□ -2.24
HLA-DRB4X5D2U9 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC1.08□□□□□ -2.24
HLA-DRB4X5D2U9 AL354695.1-201ENST00000427935 228 ntBASIC1.08□□□□□ -2.24
HLA-DRB4X5D2U9 AC093422.3-201ENST00000428506 305 ntBASIC1.08□□□□□ -2.24
HLA-DRB4X5D2U9 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.08□□□□□ -2.24
HLA-DRB4X5D2U9 AC015922.2-201ENST00000435593 184 ntBASIC1.08□□□□□ -2.24
HLA-DRB4X5D2U9 RSU1P2-202ENST00000437884 485 ntBASIC1.08□□□□□ -2.24
HLA-DRB4X5D2U9 AC092393.1-201ENST00000439625 742 ntBASIC1.08□□□□□ -2.24
HLA-DRB4X5D2U9 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC1.08□□□□□ -2.24
HLA-DRB4X5D2U9 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.08□□□□□ -2.24
HLA-DRB4X5D2U9 RPS29P23-201ENST00000458635 123 ntBASIC1.08□□□□□ -2.24
HLA-DRB4X5D2U9 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.08□□□□□ -2.24
HLA-DRB4X5D2U9 AC084024.2-201ENST00000503480 791 ntBASIC1.08□□□□□ -2.24
HLA-DRB4X5D2U9 AC108210.2-201ENST00000503681 201 ntBASIC1.08□□□□□ -2.24
HLA-DRB4X5D2U9 AC114801.2-201ENST00000503825 781 ntBASIC1.08□□□□□ -2.24
HLA-DRB4X5D2U9 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.08□□□□□ -2.24
HLA-DRB4X5D2U9 AC015720.1-201ENST00000565251 277 ntBASIC1.08□□□□□ -2.24
HLA-DRB4X5D2U9 AC095057.3-201ENST00000567102 1157 ntBASIC1.08□□□□□ -2.24
HLA-DRB4X5D2U9 AC103987.3-201ENST00000582071 292 ntBASIC1.08□□□□□ -2.24
HLA-DRB4X5D2U9 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC1.08□□□□□ -2.24
HLA-DRB4X5D2U9 MIR5739-201ENST00000619803 80 ntBASIC1.08□□□□□ -2.24
HLA-DRB4X5D2U9 MIR7843-201ENST00000622274 79 ntBASIC1.08□□□□□ -2.24
HLA-DRB4X5D2U9 MIR3199-2-201ENST00000636243 86 ntBASIC1.08□□□□□ -2.24
HLA-DRB4X5D2U9 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
HLA-DRB4X5D2U9 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.08□□□□□ -2.24
HLA-DRB4X5D2U9 RNU1-17P-201ENST00000363022 152 ntBASIC1.07□□□□□ -2.24
HLA-DRB4X5D2U9 MIR150-201ENST00000385048 84 ntBASIC1.07□□□□□ -2.24
HLA-DRB4X5D2U9 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
HLA-DRB4X5D2U9 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.07□□□□□ -2.24
HLA-DRB4X5D2U9 PPP1R11P2-201ENST00000423543 382 ntBASIC1.07□□□□□ -2.24
HLA-DRB4X5D2U9 AC008850.1-201ENST00000427546 362 ntBASIC1.07□□□□□ -2.24
HLA-DRB4X5D2U9 MTCO1P57-201ENST00000432182 261 ntBASIC1.07□□□□□ -2.24
HLA-DRB4X5D2U9 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.07□□□□□ -2.24
HLA-DRB4X5D2U9 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.07□□□□□ -2.24
HLA-DRB4X5D2U9 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.07□□□□□ -2.24
HLA-DRB4X5D2U9 RPL32P14-201ENST00000463196 378 ntBASIC1.07□□□□□ -2.24
HLA-DRB4X5D2U9 AC091917.2-201ENST00000505002 744 ntBASIC1.07□□□□□ -2.24
HLA-DRB4X5D2U9 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.07□□□□□ -2.24
HLA-DRB4X5D2U9 SNORD19.2-201ENST00000516978 73 ntBASIC1.07□□□□□ -2.24
HLA-DRB4X5D2U9 SNORA44.1-201ENST00000517031 108 ntBASIC1.07□□□□□ -2.24
HLA-DRB4X5D2U9 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC1.07□□□□□ -2.24
HLA-DRB4X5D2U9 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.07□□□□□ -2.24
HLA-DRB4X5D2U9 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC1.07□□□□□ -2.24
HLA-DRB4X5D2U9 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.07□□□□□ -2.24
HLA-DRB4X5D2U9 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.07□□□□□ -2.24
HLA-DRB4X5D2U9 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
HLA-DRB4X5D2U9 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
HLA-DRB4X5D2U9 DUXAP1-201ENST00000556632 463 ntBASIC1.07□□□□□ -2.24
HLA-DRB4X5D2U9 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC1.07□□□□□ -2.24
HLA-DRB4X5D2U9 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
HLA-DRB4X5D2U9 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.07□□□□□ -2.24
HLA-DRB4X5D2U9 MIR4298-201ENST00000584380 73 ntBASIC1.07□□□□□ -2.24
HLA-DRB4X5D2U9 AC009977.1-201ENST00000586015 570 ntBASIC1.07□□□□□ -2.24
HLA-DRB4X5D2U9 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.07□□□□□ -2.24
HLA-DRB4X5D2U9 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.07□□□□□ -2.24
HLA-DRB4X5D2U9 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
HLA-DRB4X5D2U9 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC1.07□□□□□ -2.24
HLA-DRB4X5D2U9 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.07□□□□□ -2.24
HLA-DRB4X5D2U9 AC018638.7-201ENST00000605836 1114 ntBASIC1.07□□□□□ -2.24
HLA-DRB4X5D2U9 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.07□□□□□ -2.24
HLA-DRB4X5D2U9 MTND1P37-201ENST00000636562 264 ntBASIC1.07□□□□□ -2.24
HLA-DRB4X5D2U9 U8.1-201ENST00000362843 134 ntBASIC1.06□□□□□ -2.24
HLA-DRB4X5D2U9 RNU4-13P-201ENST00000364019 141 ntBASIC1.06□□□□□ -2.24
HLA-DRB4X5D2U9 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.06□□□□□ -2.24
HLA-DRB4X5D2U9 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.06□□□□□ -2.24
HLA-DRB4X5D2U9 AL021407.1-201ENST00000404531 386 ntBASIC1.06□□□□□ -2.24
HLA-DRB4X5D2U9 RNU6-174P-201ENST00000410406 106 ntBASIC1.06□□□□□ -2.24
HLA-DRB4X5D2U9 NDUFS5P4-201ENST00000412983 318 ntBASIC1.06□□□□□ -2.24
HLA-DRB4X5D2U9 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.06□□□□□ -2.24
HLA-DRB4X5D2U9 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
HLA-DRB4X5D2U9 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.06□□□□□ -2.24
HLA-DRB4X5D2U9 EIF4EP2-201ENST00000422816 654 ntBASIC1.06□□□□□ -2.24
HLA-DRB4X5D2U9 AL160275.3-201ENST00000423876 471 ntBASIC1.06□□□□□ -2.24
HLA-DRB4X5D2U9 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.06□□□□□ -2.24
HLA-DRB4X5D2U9 HMGB1P27-201ENST00000431429 603 ntBASIC1.06□□□□□ -2.24
HLA-DRB4X5D2U9 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC1.06□□□□□ -2.24
HLA-DRB4X5D2U9 AL121601.2-201ENST00000438019 707 ntBASIC1.06□□□□□ -2.24
HLA-DRB4X5D2U9 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC1.06□□□□□ -2.24
HLA-DRB4X5D2U9 SNRPGP13-201ENST00000442212 177 ntBASIC1.06□□□□□ -2.24
HLA-DRB4X5D2U9 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms