Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CLDN16Q9Y5I7 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.29□□□□□ -1.88
CLDN16Q9Y5I7 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.29□□□□□ -1.88
CLDN16Q9Y5I7 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CLDN16Q9Y5I7 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CLDN16Q9Y5I7 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
CLDN16Q9Y5I7 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CLDN16Q9Y5I7 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.28□□□□□ -1.88
CLDN16Q9Y5I7 AC103710.2-202ENST00000641454 2853 ntBASIC3.28□□□□□ -1.88
CLDN16Q9Y5I7 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.28□□□□□ -1.88
CLDN16Q9Y5I7 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.28□□□□□ -1.88
CLDN16Q9Y5I7 RNU6-1027P-201ENST00000383998 107 ntBASIC3.28□□□□□ -1.88
CLDN16Q9Y5I7 MIR670-201ENST00000390142 98 ntBASIC3.28□□□□□ -1.88
CLDN16Q9Y5I7 RNU6-903P-201ENST00000391270 109 ntBASIC3.28□□□□□ -1.88
CLDN16Q9Y5I7 AL139039.1-201ENST00000401900 692 ntBASIC3.28□□□□□ -1.88
CLDN16Q9Y5I7 RNU2-33P-201ENST00000410344 192 ntBASIC3.28□□□□□ -1.88
CLDN16Q9Y5I7 RNU4-46P-201ENST00000410818 138 ntBASIC3.28□□□□□ -1.88
CLDN16Q9Y5I7 RPS29P4-201ENST00000414733 161 ntBASIC3.28□□□□□ -1.88
CLDN16Q9Y5I7 AC002075.2-201ENST00000425207 252 ntBASIC3.28□□□□□ -1.88
CLDN16Q9Y5I7 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.28□□□□□ -1.88
CLDN16Q9Y5I7 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.28□□□□□ -1.88
CLDN16Q9Y5I7 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.28□□□□□ -1.88
CLDN16Q9Y5I7 VN1R34P-201ENST00000447387 883 ntBASIC3.28□□□□□ -1.88
CLDN16Q9Y5I7 AC008155.2-201ENST00000464337 397 ntBASIC3.28□□□□□ -1.88
CLDN16Q9Y5I7 AC117522.3-201ENST00000507974 584 ntBASIC3.28□□□□□ -1.88
CLDN16Q9Y5I7 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CLDN16Q9Y5I7 RNU6-914P-201ENST00000516749 109 ntBASIC3.28□□□□□ -1.88
CLDN16Q9Y5I7 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.28□□□□□ -1.88
CLDN16Q9Y5I7 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.28□□□□□ -1.88
CLDN16Q9Y5I7 CASP1P1-201ENST00000526345 212 ntBASIC3.28□□□□□ -1.88
CLDN16Q9Y5I7 MTCO3P24-201ENST00000572729 782 ntBASIC3.28□□□□□ -1.88
CLDN16Q9Y5I7 MIR4738-201ENST00000579134 87 ntBASIC3.28□□□□□ -1.88
CLDN16Q9Y5I7 MIR15A-201ENST00000607334 83 ntBASIC3.28□□□□□ -1.88
CLDN16Q9Y5I7 AP001486.3-201ENST00000615334 372 ntBASIC3.28□□□□□ -1.88
CLDN16Q9Y5I7 MIR6075-201ENST00000620782 95 ntBASIC3.28□□□□□ -1.88
CLDN16Q9Y5I7 AC010338.1-201ENST00000621823 717 ntBASIC3.28□□□□□ -1.88
CLDN16Q9Y5I7 Z99571.1-201ENST00000636677 394 ntBASIC3.28□□□□□ -1.88
CLDN16Q9Y5I7 TPTE2P4-201ENST00000258589 1605 ntBASIC3.28□□□□□ -1.88
CLDN16Q9Y5I7 AC233263.6-201ENST00000631132 1963 ntBASIC3.28□□□□□ -1.88
CLDN16Q9Y5I7 MAPK10-373ENST00000641983 6772 ntBASIC3.28□□□□□ -1.88
CLDN16Q9Y5I7 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.28□□□□□ -1.88
CLDN16Q9Y5I7 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CLDN16Q9Y5I7 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
CLDN16Q9Y5I7 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CLDN16Q9Y5I7 AC004520.1-201ENST00000608362 1413 ntBASIC3.27□□□□□ -1.89
CLDN16Q9Y5I7 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CLDN16Q9Y5I7 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
CLDN16Q9Y5I7 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
CLDN16Q9Y5I7 AC004972.1-201ENST00000623934 2209 ntBASIC3.27□□□□□ -1.89
CLDN16Q9Y5I7 MFSD8-233ENST00000641482 4860 ntBASIC3.27□□□□□ -1.89
CLDN16Q9Y5I7 ASNSP3-201ENST00000451989 1306 ntBASIC3.27□□□□□ -1.89
CLDN16Q9Y5I7 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
CLDN16Q9Y5I7 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
CLDN16Q9Y5I7 RNU4-35P-201ENST00000362588 141 ntBASIC3.27□□□□□ -1.89
CLDN16Q9Y5I7 RNY3P3-201ENST00000363816 102 ntBASIC3.27□□□□□ -1.89
CLDN16Q9Y5I7 MIR183-201ENST00000384958 110 ntBASIC3.27□□□□□ -1.89
CLDN16Q9Y5I7 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.27□□□□□ -1.89
CLDN16Q9Y5I7 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.27□□□□□ -1.89
CLDN16Q9Y5I7 RN7SKP111-201ENST00000410349 271 ntBASIC3.27□□□□□ -1.89
CLDN16Q9Y5I7 OR9R1P-201ENST00000412200 877 ntBASIC3.27□□□□□ -1.89
CLDN16Q9Y5I7 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CLDN16Q9Y5I7 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.27□□□□□ -1.89
CLDN16Q9Y5I7 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.27□□□□□ -1.89
CLDN16Q9Y5I7 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3.27□□□□□ -1.89
CLDN16Q9Y5I7 AL159987.2-201ENST00000432754 307 ntBASIC3.27□□□□□ -1.89
CLDN16Q9Y5I7 AC073063.1-201ENST00000434352 607 ntBASIC3.27□□□□□ -1.89
CLDN16Q9Y5I7 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.27□□□□□ -1.89
CLDN16Q9Y5I7 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.27□□□□□ -1.89
CLDN16Q9Y5I7 Z82210.1-201ENST00000440037 231 ntBASIC3.27□□□□□ -1.89
CLDN16Q9Y5I7 AC104058.1-201ENST00000448028 297 ntBASIC3.27□□□□□ -1.89
CLDN16Q9Y5I7 AC092798.1-201ENST00000458542 409 ntBASIC3.27□□□□□ -1.89
CLDN16Q9Y5I7 RPL23AP14-201ENST00000468281 468 ntBASIC3.27□□□□□ -1.89
CLDN16Q9Y5I7 RN7SL293P-201ENST00000481765 281 ntBASIC3.27□□□□□ -1.89
CLDN16Q9Y5I7 EIF4EP3-201ENST00000498782 656 ntBASIC3.27□□□□□ -1.89
CLDN16Q9Y5I7 PRDX4P1-201ENST00000507189 574 ntBASIC3.27□□□□□ -1.89
CLDN16Q9Y5I7 RNU4-29P-201ENST00000515943 174 ntBASIC3.27□□□□□ -1.89
CLDN16Q9Y5I7 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.27□□□□□ -1.89
CLDN16Q9Y5I7 RNU6-685P-201ENST00000517088 95 ntBASIC3.27□□□□□ -1.89
CLDN16Q9Y5I7 AP005435.4-201ENST00000529514 284 ntBASIC3.27□□□□□ -1.89
CLDN16Q9Y5I7 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.27□□□□□ -1.89
CLDN16Q9Y5I7 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.27□□□□□ -1.89
CLDN16Q9Y5I7 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.27□□□□□ -1.89
CLDN16Q9Y5I7 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.27□□□□□ -1.89
CLDN16Q9Y5I7 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.27□□□□□ -1.89
CLDN16Q9Y5I7 AC106782.4-201ENST00000568264 210 ntBASIC3.27□□□□□ -1.89
CLDN16Q9Y5I7 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CLDN16Q9Y5I7 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.27□□□□□ -1.89
CLDN16Q9Y5I7 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CLDN16Q9Y5I7 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.27□□□□□ -1.89
CLDN16Q9Y5I7 BNIP3P30-201ENST00000601184 574 ntBASIC3.27□□□□□ -1.89
CLDN16Q9Y5I7 AL020991.1-201ENST00000612314 373 ntBASIC3.27□□□□□ -1.89
CLDN16Q9Y5I7 AC022149.2-201ENST00000621061 203 ntBASIC3.27□□□□□ -1.89
CLDN16Q9Y5I7 AC027309.3-201ENST00000623419 351 ntBASIC3.27□□□□□ -1.89
CLDN16Q9Y5I7 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.27□□□□□ -1.89
CLDN16Q9Y5I7 U6.105-201ENST00000637379 88 ntBASIC3.27□□□□□ -1.89
CLDN16Q9Y5I7 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CLDN16Q9Y5I7 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CLDN16Q9Y5I7 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.27□□□□□ -1.89
CLDN16Q9Y5I7 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.27□□□□□ -1.89
CLDN16Q9Y5I7 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms