Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 RNU6-488P-201ENST00000515918 99 ntBASIC0.82□□□□□ -2.28
AP4S1Q9Y587 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC0.82□□□□□ -2.28
AP4S1Q9Y587 MAL2-206ENST00000522187 547 ntTSL 4 BASIC0.82□□□□□ -2.28
AP4S1Q9Y587 AP002748.2-201ENST00000528671 348 ntBASIC0.82□□□□□ -2.28
AP4S1Q9Y587 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC0.82□□□□□ -2.28
AP4S1Q9Y587 AC135279.1-201ENST00000543493 504 ntBASIC0.82□□□□□ -2.28
AP4S1Q9Y587 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC0.82□□□□□ -2.28
AP4S1Q9Y587 MTCYBP22-201ENST00000603788 447 ntBASIC0.82□□□□□ -2.28
AP4S1Q9Y587 AC007349.4-201ENST00000608114 532 ntBASIC0.82□□□□□ -2.28
AP4S1Q9Y587 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
AP4S1Q9Y587 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
AP4S1Q9Y587 AC010889.1-201ENST00000566193 2666 ntBASIC0.82□□□□□ -2.28
AP4S1Q9Y587 RNU1-78P-201ENST00000391248 165 ntBASIC0.81□□□□□ -2.28
AP4S1Q9Y587 RN7SKP61-201ENST00000410642 295 ntBASIC0.81□□□□□ -2.28
AP4S1Q9Y587 UBE2V1P9-201ENST00000414760 368 ntBASIC0.81□□□□□ -2.28
AP4S1Q9Y587 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC0.81□□□□□ -2.28
AP4S1Q9Y587 AL392003.1-201ENST00000434394 243 ntBASIC0.81□□□□□ -2.28
AP4S1Q9Y587 AL354941.1-201ENST00000438600 464 ntBASIC0.81□□□□□ -2.28
AP4S1Q9Y587 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.81□□□□□ -2.28
AP4S1Q9Y587 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC0.81□□□□□ -2.28
AP4S1Q9Y587 LARP1BP2-201ENST00000486594 519 ntBASIC0.81□□□□□ -2.28
AP4S1Q9Y587 RNU6-351P-201ENST00000516097 100 ntBASIC0.81□□□□□ -2.28
AP4S1Q9Y587 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC0.81□□□□□ -2.28
AP4S1Q9Y587 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC0.81□□□□□ -2.28
AP4S1Q9Y587 AC005668.1-201ENST00000571142 476 ntBASIC0.81□□□□□ -2.28
AP4S1Q9Y587 MIR4422-201ENST00000581938 83 ntBASIC0.81□□□□□ -2.28
AP4S1Q9Y587 AC015688.2-201ENST00000584523 262 ntBASIC0.81□□□□□ -2.28
AP4S1Q9Y587 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC0.81□□□□□ -2.28
AP4S1Q9Y587 AC009974.1-201ENST00000608881 455 ntBASIC0.81□□□□□ -2.28
AP4S1Q9Y587 AL157834.3-201ENST00000615543 103 ntBASIC0.81□□□□□ -2.28
AP4S1Q9Y587 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC0.81□□□□□ -2.28
AP4S1Q9Y587 AL356585.4-201ENST00000623078 1229 ntBASIC0.81□□□□□ -2.28
AP4S1Q9Y587 AC024595.1-201ENST00000623088 387 ntBASIC0.81□□□□□ -2.28
AP4S1Q9Y587 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.81□□□□□ -2.28
AP4S1Q9Y587 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
AP4S1Q9Y587 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.81□□□□□ -2.28
AP4S1Q9Y587 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC0.81□□□□□ -2.28
AP4S1Q9Y587 RNU6-661P-201ENST00000362409 107 ntBASIC0.8□□□□□ -2.28
AP4S1Q9Y587 RNU1-17P-201ENST00000363022 152 ntBASIC0.8□□□□□ -2.28
AP4S1Q9Y587 SNORA25.8-201ENST00000364831 128 ntBASIC0.8□□□□□ -2.28
AP4S1Q9Y587 MIR518D-201ENST00000385014 87 ntBASIC0.8□□□□□ -2.28
AP4S1Q9Y587 MIR1283-2-201ENST00000408621 87 ntBASIC0.8□□□□□ -2.28
AP4S1Q9Y587 RNU4-62P-201ENST00000410125 130 ntBASIC0.8□□□□□ -2.28
AP4S1Q9Y587 RNU2-63P-201ENST00000410792 194 ntBASIC0.8□□□□□ -2.28
AP4S1Q9Y587 LUZP4P1-201ENST00000415420 344 ntBASIC0.8□□□□□ -2.28
AP4S1Q9Y587 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.8□□□□□ -2.28
AP4S1Q9Y587 RPS24P7-201ENST00000416921 246 ntBASIC0.8□□□□□ -2.28
AP4S1Q9Y587 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC0.8□□□□□ -2.28
AP4S1Q9Y587 CR769776.1-201ENST00000441254 787 ntBASIC0.8□□□□□ -2.28
AP4S1Q9Y587 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC0.8□□□□□ -2.28
AP4S1Q9Y587 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC0.8□□□□□ -2.28
AP4S1Q9Y587 AC092757.1-201ENST00000467293 467 ntBASIC0.8□□□□□ -2.28
AP4S1Q9Y587 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.8□□□□□ -2.28
AP4S1Q9Y587 AC025459.1-201ENST00000504072 156 ntBASIC0.8□□□□□ -2.28
AP4S1Q9Y587 RNU6-27P-201ENST00000516146 107 ntBASIC0.8□□□□□ -2.28
AP4S1Q9Y587 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC0.8□□□□□ -2.28
AP4S1Q9Y587 AP003034.1-201ENST00000534621 422 ntBASIC0.8□□□□□ -2.28
AP4S1Q9Y587 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.8□□□□□ -2.28
AP4S1Q9Y587 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC0.8□□□□□ -2.28
AP4S1Q9Y587 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.8□□□□□ -2.28
AP4S1Q9Y587 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC0.8□□□□□ -2.28
AP4S1Q9Y587 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC0.8□□□□□ -2.28
AP4S1Q9Y587 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC0.79□□□□□ -2.28
AP4S1Q9Y587 RNU4-51P-201ENST00000364206 140 ntBASIC0.79□□□□□ -2.28
AP4S1Q9Y587 RNU6-217P-201ENST00000384164 104 ntBASIC0.79□□□□□ -2.28
AP4S1Q9Y587 MIR515-2-201ENST00000384883 83 ntBASIC0.79□□□□□ -2.28
AP4S1Q9Y587 MIR515-1-201ENST00000384884 83 ntBASIC0.79□□□□□ -2.28
AP4S1Q9Y587 TOMM20P4-201ENST00000427861 435 ntBASIC0.79□□□□□ -2.28
AP4S1Q9Y587 RAB11AP1-201ENST00000442978 646 ntBASIC0.79□□□□□ -2.28
AP4S1Q9Y587 RPS27P1-201ENST00000450552 247 ntBASIC0.79□□□□□ -2.28
AP4S1Q9Y587 AP1S2P1-201ENST00000457344 379 ntBASIC0.79□□□□□ -2.28
AP4S1Q9Y587 AL133373.1-201ENST00000497098 94 ntBASIC0.79□□□□□ -2.28
AP4S1Q9Y587 OR5AK1P-201ENST00000524837 922 ntBASIC0.79□□□□□ -2.28
AP4S1Q9Y587 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC0.79□□□□□ -2.28
AP4S1Q9Y587 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC0.79□□□□□ -2.28
AP4S1Q9Y587 AC104763.2-201ENST00000604179 382 ntBASIC0.79□□□□□ -2.28
AP4S1Q9Y587 AC080013.4-201ENST00000607624 649 ntBASIC0.79□□□□□ -2.28
AP4S1Q9Y587 AL136313.1-201ENST00000624804 202 ntBASIC0.79□□□□□ -2.28
AP4S1Q9Y587 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC0.79□□□□□ -2.28
AP4S1Q9Y587 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC0.78□□□□□ -2.28
AP4S1Q9Y587 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC0.78□□□□□ -2.28
AP4S1Q9Y587 HMGB1P17-201ENST00000403495 628 ntBASIC0.78□□□□□ -2.28
AP4S1Q9Y587 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.78□□□□□ -2.28
AP4S1Q9Y587 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC0.78□□□□□ -2.28
AP4S1Q9Y587 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC0.78□□□□□ -2.28
AP4S1Q9Y587 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.78□□□□□ -2.28
AP4S1Q9Y587 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.78□□□□□ -2.28
AP4S1Q9Y587 PRPS1P1-201ENST00000445305 876 ntBASIC0.78□□□□□ -2.28
AP4S1Q9Y587 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC0.78□□□□□ -2.28
AP4S1Q9Y587 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC0.78□□□□□ -2.28
AP4S1Q9Y587 AC091917.2-201ENST00000505002 744 ntBASIC0.78□□□□□ -2.28
AP4S1Q9Y587 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
AP4S1Q9Y587 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC0.78□□□□□ -2.28
AP4S1Q9Y587 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC0.78□□□□□ -2.28
AP4S1Q9Y587 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC0.78□□□□□ -2.28
AP4S1Q9Y587 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC0.78□□□□□ -2.28
AP4S1Q9Y587 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC0.78□□□□□ -2.28
AP4S1Q9Y587 RPS3AP4-201ENST00000555161 764 ntBASIC0.78□□□□□ -2.28
AP4S1Q9Y587 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC0.78□□□□□ -2.28
AP4S1Q9Y587 MIR4765-201ENST00000585007 77 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms