Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 USP9YP33-201ENST00000412220 421 ntBASIC1.83□□□□□ -2.12
CHTOPQ9Y3Y2 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC1.83□□□□□ -2.12
CHTOPQ9Y3Y2 NUP35P1-201ENST00000422734 947 ntBASIC1.83□□□□□ -2.12
CHTOPQ9Y3Y2 AL451062.2-201ENST00000427515 271 ntBASIC1.83□□□□□ -2.12
CHTOPQ9Y3Y2 USP9YP11-201ENST00000427537 717 ntBASIC1.83□□□□□ -2.12
CHTOPQ9Y3Y2 AC112220.1-201ENST00000434628 355 ntBASIC1.83□□□□□ -2.12
CHTOPQ9Y3Y2 USP9YP35-201ENST00000435696 412 ntBASIC1.83□□□□□ -2.12
CHTOPQ9Y3Y2 MTND4P25-201ENST00000441039 533 ntBASIC1.83□□□□□ -2.12
CHTOPQ9Y3Y2 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.83□□□□□ -2.12
CHTOPQ9Y3Y2 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.83□□□□□ -2.12
CHTOPQ9Y3Y2 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.83□□□□□ -2.12
CHTOPQ9Y3Y2 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
CHTOPQ9Y3Y2 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC1.83□□□□□ -2.12
CHTOPQ9Y3Y2 AC109927.2-201ENST00000506416 303 ntBASIC1.83□□□□□ -2.12
CHTOPQ9Y3Y2 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC1.83□□□□□ -2.12
CHTOPQ9Y3Y2 AC008837.2-201ENST00000513076 418 ntBASIC1.83□□□□□ -2.12
CHTOPQ9Y3Y2 RNA5SP216-201ENST00000516111 123 ntBASIC1.83□□□□□ -2.12
CHTOPQ9Y3Y2 RN7SKP157-201ENST00000516174 282 ntBASIC1.83□□□□□ -2.12
CHTOPQ9Y3Y2 RNU6-572P-201ENST00000516724 80 ntBASIC1.83□□□□□ -2.12
CHTOPQ9Y3Y2 RNU1-40P-201ENST00000516816 164 ntBASIC1.83□□□□□ -2.12
CHTOPQ9Y3Y2 RNU1-97P-201ENST00000516872 164 ntBASIC1.83□□□□□ -2.12
CHTOPQ9Y3Y2 SNORA31.23-201ENST00000517219 133 ntBASIC1.83□□□□□ -2.12
CHTOPQ9Y3Y2 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.83□□□□□ -2.12
CHTOPQ9Y3Y2 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC1.83□□□□□ -2.12
CHTOPQ9Y3Y2 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
CHTOPQ9Y3Y2 GNAI2P1-201ENST00000541815 315 ntBASIC1.83□□□□□ -2.12
CHTOPQ9Y3Y2 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.83□□□□□ -2.12
CHTOPQ9Y3Y2 AC021646.1-201ENST00000605469 484 ntBASIC1.83□□□□□ -2.12
CHTOPQ9Y3Y2 AC107952.2-201ENST00000606048 486 ntBASIC1.83□□□□□ -2.12
CHTOPQ9Y3Y2 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC1.83□□□□□ -2.12
CHTOPQ9Y3Y2 AC245297.2-201ENST00000610119 565 ntBASIC1.83□□□□□ -2.12
CHTOPQ9Y3Y2 AL442067.2-201ENST00000614033 363 ntBASIC1.83□□□□□ -2.12
CHTOPQ9Y3Y2 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC1.83□□□□□ -2.12
CHTOPQ9Y3Y2 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC1.83□□□□□ -2.12
CHTOPQ9Y3Y2 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.83□□□□□ -2.12
CHTOPQ9Y3Y2 WARS-244ENST00000627608 123 ntTSL 5 BASIC1.83□□□□□ -2.12
CHTOPQ9Y3Y2 Z99571.1-201ENST00000636677 394 ntBASIC1.83□□□□□ -2.12
CHTOPQ9Y3Y2 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
CHTOPQ9Y3Y2 AC006020.1-201ENST00000420179 1854 ntBASIC1.83□□□□□ -2.12
CHTOPQ9Y3Y2 SNORD115-3-201ENST00000363100 82 ntBASIC1.82□□□□□ -2.12
CHTOPQ9Y3Y2 RNU1-23P-201ENST00000363361 144 ntBASIC1.82□□□□□ -2.12
CHTOPQ9Y3Y2 RNU6-898P-201ENST00000365627 104 ntBASIC1.82□□□□□ -2.12
CHTOPQ9Y3Y2 MDM4-202ENST00000367180 547 ntTSL 3 BASIC1.82□□□□□ -2.12
CHTOPQ9Y3Y2 SNORA48.7-201ENST00000391302 135 ntBASIC1.82□□□□□ -2.12
CHTOPQ9Y3Y2 AL162578.1-201ENST00000406202 378 ntBASIC1.82□□□□□ -2.12
CHTOPQ9Y3Y2 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC1.82□□□□□ -2.12
CHTOPQ9Y3Y2 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CHTOPQ9Y3Y2 RPLP0P7-201ENST00000416050 667 ntBASIC1.82□□□□□ -2.12
CHTOPQ9Y3Y2 AC138623.1-201ENST00000418060 216 ntBASIC1.82□□□□□ -2.12
CHTOPQ9Y3Y2 AC083875.1-201ENST00000419509 405 ntBASIC1.82□□□□□ -2.12
CHTOPQ9Y3Y2 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.82□□□□□ -2.12
CHTOPQ9Y3Y2 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.82□□□□□ -2.12
CHTOPQ9Y3Y2 AL513328.1-201ENST00000446460 224 ntBASIC1.82□□□□□ -2.12
CHTOPQ9Y3Y2 AP000542.1-201ENST00000448473 371 ntBASIC1.82□□□□□ -2.12
CHTOPQ9Y3Y2 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.82□□□□□ -2.12
CHTOPQ9Y3Y2 AC006512.1-201ENST00000468816 291 ntBASIC1.82□□□□□ -2.12
CHTOPQ9Y3Y2 AC087884.1-201ENST00000469738 328 ntBASIC1.82□□□□□ -2.12
CHTOPQ9Y3Y2 AC104629.1-201ENST00000494226 508 ntBASIC1.82□□□□□ -2.12
CHTOPQ9Y3Y2 AC083906.5-201ENST00000503722 328 ntBASIC1.82□□□□□ -2.12
CHTOPQ9Y3Y2 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC1.82□□□□□ -2.12
CHTOPQ9Y3Y2 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.82□□□□□ -2.12
CHTOPQ9Y3Y2 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.82□□□□□ -2.12
CHTOPQ9Y3Y2 AC008885.1-201ENST00000514930 301 ntBASIC1.82□□□□□ -2.12
CHTOPQ9Y3Y2 RNU6-678P-201ENST00000516832 109 ntBASIC1.82□□□□□ -2.12
CHTOPQ9Y3Y2 RNU6-64P-201ENST00000517119 105 ntBASIC1.82□□□□□ -2.12
CHTOPQ9Y3Y2 CKS1BP7-201ENST00000522230 235 ntBASIC1.82□□□□□ -2.12
CHTOPQ9Y3Y2 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC1.82□□□□□ -2.12
CHTOPQ9Y3Y2 MIR5680-201ENST00000577577 84 ntBASIC1.82□□□□□ -2.12
CHTOPQ9Y3Y2 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC1.82□□□□□ -2.12
CHTOPQ9Y3Y2 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC1.82□□□□□ -2.12
CHTOPQ9Y3Y2 RPL30P11-203ENST00000598995 310 ntBASIC1.82□□□□□ -2.12
CHTOPQ9Y3Y2 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.82□□□□□ -2.12
CHTOPQ9Y3Y2 AC126118.1-201ENST00000607744 628 ntBASIC1.82□□□□□ -2.12
CHTOPQ9Y3Y2 AC123767.1-202ENST00000620407 817 ntBASIC1.82□□□□□ -2.12
CHTOPQ9Y3Y2 AC034229.5-201ENST00000624258 185 ntBASIC1.82□□□□□ -2.12
CHTOPQ9Y3Y2 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
CHTOPQ9Y3Y2 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
CHTOPQ9Y3Y2 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC1.81□□□□□ -2.12
CHTOPQ9Y3Y2 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
CHTOPQ9Y3Y2 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.81□□□□□ -2.12
CHTOPQ9Y3Y2 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
CHTOPQ9Y3Y2 RNU6-560P-201ENST00000364007 108 ntBASIC1.81□□□□□ -2.12
CHTOPQ9Y3Y2 RNU6-234P-201ENST00000365229 104 ntBASIC1.81□□□□□ -2.12
CHTOPQ9Y3Y2 SNORA9-201ENST00000384215 133 ntBASIC1.81□□□□□ -2.12
CHTOPQ9Y3Y2 RNU1-57P-201ENST00000384491 166 ntBASIC1.81□□□□□ -2.12
CHTOPQ9Y3Y2 SNORA11-201ENST00000408789 128 ntBASIC1.81□□□□□ -2.12
CHTOPQ9Y3Y2 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC1.81□□□□□ -2.12
CHTOPQ9Y3Y2 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.81□□□□□ -2.12
CHTOPQ9Y3Y2 MTATP6P11-201ENST00000428071 670 ntBASIC1.81□□□□□ -2.12
CHTOPQ9Y3Y2 YME1L1P1-201ENST00000429435 297 ntBASIC1.81□□□□□ -2.12
CHTOPQ9Y3Y2 TEX41-209ENST00000451478 452 ntTSL 2 BASIC1.81□□□□□ -2.12
CHTOPQ9Y3Y2 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC1.81□□□□□ -2.12
CHTOPQ9Y3Y2 AP001486.1-201ENST00000463339 476 ntBASIC1.81□□□□□ -2.12
CHTOPQ9Y3Y2 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC1.81□□□□□ -2.12
CHTOPQ9Y3Y2 AC027575.1-201ENST00000481064 460 ntBASIC1.81□□□□□ -2.12
CHTOPQ9Y3Y2 AC018868.1-201ENST00000491307 315 ntBASIC1.81□□□□□ -2.12
CHTOPQ9Y3Y2 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
CHTOPQ9Y3Y2 AC109445.1-201ENST00000512356 383 ntBASIC1.81□□□□□ -2.12
CHTOPQ9Y3Y2 RNA5SP364-201ENST00000516938 78 ntBASIC1.81□□□□□ -2.12
CHTOPQ9Y3Y2 RNU6-667P-201ENST00000517186 102 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms