Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 OR56A5-201ENST00000340110 738 ntBASIC5.26□□□□□ -1.57
RTCBQ9Y3I0 Y_RNA.214-201ENST00000364201 112 ntBASIC5.26□□□□□ -1.57
RTCBQ9Y3I0 Y_RNA.551-201ENST00000384661 102 ntBASIC5.26□□□□□ -1.57
RTCBQ9Y3I0 SNORD66.1-201ENST00000391230 76 ntBASIC5.26□□□□□ -1.57
RTCBQ9Y3I0 RNU4-78P-201ENST00000410940 126 ntBASIC5.26□□□□□ -1.57
RTCBQ9Y3I0 RBMY1KP-201ENST00000423480 476 ntBASIC5.26□□□□□ -1.57
RTCBQ9Y3I0 AL353997.1-201ENST00000432936 108 ntBASIC5.26□□□□□ -1.57
RTCBQ9Y3I0 RPS26P2-201ENST00000440331 348 ntBASIC5.26□□□□□ -1.57
RTCBQ9Y3I0 DAP3P1-201ENST00000441522 278 ntBASIC5.26□□□□□ -1.57
RTCBQ9Y3I0 AL121871.1-201ENST00000443413 436 ntBASIC5.26□□□□□ -1.57
RTCBQ9Y3I0 MTCO3P8-201ENST00000453691 755 ntBASIC5.26□□□□□ -1.57
RTCBQ9Y3I0 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC5.26□□□□□ -1.57
RTCBQ9Y3I0 RNU6-1023P-201ENST00000516137 106 ntBASIC5.26□□□□□ -1.57
RTCBQ9Y3I0 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
RTCBQ9Y3I0 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC5.26□□□□□ -1.57
RTCBQ9Y3I0 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RTCBQ9Y3I0 AL160281.1-201ENST00000605307 311 ntBASIC5.26□□□□□ -1.57
RTCBQ9Y3I0 AC084757.4-201ENST00000616350 526 ntBASIC5.26□□□□□ -1.57
RTCBQ9Y3I0 AC012314.7-201ENST00000619693 93 ntBASIC5.26□□□□□ -1.57
RTCBQ9Y3I0 AL031601.2-202ENST00000622650 282 ntBASIC5.26□□□□□ -1.57
RTCBQ9Y3I0 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC5.26□□□□□ -1.57
RTCBQ9Y3I0 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
RTCBQ9Y3I0 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
RTCBQ9Y3I0 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
RTCBQ9Y3I0 ZNF72P-201ENST00000425869 1908 ntBASIC5.26□□□□□ -1.57
RTCBQ9Y3I0 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RTCBQ9Y3I0 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RTCBQ9Y3I0 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RTCBQ9Y3I0 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
RTCBQ9Y3I0 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RTCBQ9Y3I0 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
RTCBQ9Y3I0 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.25□□□□□ -1.57
RTCBQ9Y3I0 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5.25□□□□□ -1.57
RTCBQ9Y3I0 Y_RNA.483-201ENST00000384380 101 ntBASIC5.25□□□□□ -1.57
RTCBQ9Y3I0 RNU6-790P-201ENST00000384479 105 ntBASIC5.25□□□□□ -1.57
RTCBQ9Y3I0 Y_RNA.515-201ENST00000384535 112 ntBASIC5.25□□□□□ -1.57
RTCBQ9Y3I0 AL445529.1-201ENST00000398713 389 ntBASIC5.25□□□□□ -1.57
RTCBQ9Y3I0 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
RTCBQ9Y3I0 HSPE1P8-201ENST00000406997 288 ntBASIC5.25□□□□□ -1.57
RTCBQ9Y3I0 RNU2-43P-201ENST00000410306 190 ntBASIC5.25□□□□□ -1.57
RTCBQ9Y3I0 SNORA57.3-201ENST00000411095 141 ntBASIC5.25□□□□□ -1.57
RTCBQ9Y3I0 AC006011.1-201ENST00000442758 349 ntBASIC5.25□□□□□ -1.57
RTCBQ9Y3I0 RPS3AP12-201ENST00000443616 753 ntBASIC5.25□□□□□ -1.57
RTCBQ9Y3I0 snoU13.24-201ENST00000458998 104 ntBASIC5.25□□□□□ -1.57
RTCBQ9Y3I0 AC069499.1-201ENST00000489433 509 ntBASIC5.25□□□□□ -1.57
RTCBQ9Y3I0 RNU7-4P-201ENST00000516961 62 ntBASIC5.25□□□□□ -1.57
RTCBQ9Y3I0 TRAPPC2P2-201ENST00000517589 409 ntBASIC5.25□□□□□ -1.57
RTCBQ9Y3I0 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC5.25□□□□□ -1.57
RTCBQ9Y3I0 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5.25□□□□□ -1.57
RTCBQ9Y3I0 AC087369.1-201ENST00000520775 996 ntBASIC5.25□□□□□ -1.57
RTCBQ9Y3I0 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
RTCBQ9Y3I0 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC5.25□□□□□ -1.57
RTCBQ9Y3I0 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC5.25□□□□□ -1.57
RTCBQ9Y3I0 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC5.25□□□□□ -1.57
RTCBQ9Y3I0 MIR3936-201ENST00000584304 110 ntBASIC5.25□□□□□ -1.57
RTCBQ9Y3I0 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.25□□□□□ -1.57
RTCBQ9Y3I0 AL355810.1-201ENST00000614629 552 ntBASIC5.25□□□□□ -1.57
RTCBQ9Y3I0 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
RTCBQ9Y3I0 AC091953.5-201ENST00000622919 233 ntBASIC5.25□□□□□ -1.57
RTCBQ9Y3I0 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.25□□□□□ -1.57
RTCBQ9Y3I0 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
RTCBQ9Y3I0 AL450326.2-201ENST00000421913 1962 ntBASIC5.25□□□□□ -1.57
RTCBQ9Y3I0 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.25□□□□□ -1.57
RTCBQ9Y3I0 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC5.25□□□□□ -1.57
RTCBQ9Y3I0 AL451142.2-201ENST00000429076 2090 ntBASIC5.25□□□□□ -1.57
RTCBQ9Y3I0 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RTCBQ9Y3I0 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
RTCBQ9Y3I0 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
RTCBQ9Y3I0 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
RTCBQ9Y3I0 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
RTCBQ9Y3I0 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
RTCBQ9Y3I0 Y_RNA.14-201ENST00000362415 103 ntBASIC5.24□□□□□ -1.57
RTCBQ9Y3I0 SNORA20.1-201ENST00000364790 130 ntBASIC5.24□□□□□ -1.57
RTCBQ9Y3I0 Y_RNA.376-201ENST00000365638 108 ntBASIC5.24□□□□□ -1.57
RTCBQ9Y3I0 RNU1-44P-201ENST00000384453 163 ntBASIC5.24□□□□□ -1.57
RTCBQ9Y3I0 Y_RNA.526-201ENST00000384572 110 ntBASIC5.24□□□□□ -1.57
RTCBQ9Y3I0 MIR1179-201ENST00000408703 91 ntBASIC5.24□□□□□ -1.57
RTCBQ9Y3I0 AL030996.1-201ENST00000411430 235 ntBASIC5.24□□□□□ -1.57
RTCBQ9Y3I0 SSXP9-201ENST00000417503 292 ntBASIC5.24□□□□□ -1.57
RTCBQ9Y3I0 ELOCP20-201ENST00000422460 345 ntBASIC5.24□□□□□ -1.57
RTCBQ9Y3I0 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC5.24□□□□□ -1.57
RTCBQ9Y3I0 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC5.24□□□□□ -1.57
RTCBQ9Y3I0 EIF4A1P11-201ENST00000451239 222 ntBASIC5.24□□□□□ -1.57
RTCBQ9Y3I0 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RTCBQ9Y3I0 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC5.24□□□□□ -1.57
RTCBQ9Y3I0 SNORA25.11-201ENST00000515935 105 ntBASIC5.24□□□□□ -1.57
RTCBQ9Y3I0 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC5.24□□□□□ -1.57
RTCBQ9Y3I0 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC5.24□□□□□ -1.57
RTCBQ9Y3I0 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC5.24□□□□□ -1.57
RTCBQ9Y3I0 HSPE1P20-201ENST00000538133 289 ntBASIC5.24□□□□□ -1.57
RTCBQ9Y3I0 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC5.24□□□□□ -1.57
RTCBQ9Y3I0 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC5.24□□□□□ -1.57
RTCBQ9Y3I0 MIR4273-201ENST00000582824 84 ntBASIC5.24□□□□□ -1.57
RTCBQ9Y3I0 OR1M4P-201ENST00000589199 287 ntBASIC5.24□□□□□ -1.57
RTCBQ9Y3I0 AC007179.3-201ENST00000604976 235 ntBASIC5.24□□□□□ -1.57
RTCBQ9Y3I0 AC019176.2-201ENST00000611579 315 ntBASIC5.24□□□□□ -1.57
RTCBQ9Y3I0 AC005344.1-201ENST00000613391 459 ntBASIC5.24□□□□□ -1.57
RTCBQ9Y3I0 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
RTCBQ9Y3I0 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC5.24□□□□□ -1.57
RTCBQ9Y3I0 AC005183.1-201ENST00000603687 1979 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms