Protein–RNA interactions for Protein: Q9ULT6

ZNRF3, E3 ubiquitin-protein ligase ZNRF3, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF3Q9ULT6 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
ZNRF3Q9ULT6 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.69□□□□□ -1.66
ZNRF3Q9ULT6 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
ZNRF3Q9ULT6 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
ZNRF3Q9ULT6 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
ZNRF3Q9ULT6 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.69□□□□□ -1.66
ZNRF3Q9ULT6 RNA5SP52-201ENST00000362448 134 ntBASIC4.69□□□□□ -1.66
ZNRF3Q9ULT6 SNORD3E-201ENST00000362899 217 ntBASIC4.69□□□□□ -1.66
ZNRF3Q9ULT6 SNORA22B-201ENST00000383876 138 ntBASIC4.69□□□□□ -1.66
ZNRF3Q9ULT6 RNU6-310P-201ENST00000384655 107 ntBASIC4.69□□□□□ -1.66
ZNRF3Q9ULT6 MIR514A1-201ENST00000385133 98 ntBASIC4.69□□□□□ -1.66
ZNRF3Q9ULT6 HDGFP1-201ENST00000405943 252 ntBASIC4.69□□□□□ -1.66
ZNRF3Q9ULT6 MIR1251-201ENST00000408552 70 ntBASIC4.69□□□□□ -1.66
ZNRF3Q9ULT6 RNU6-293P-201ENST00000411259 106 ntBASIC4.69□□□□□ -1.66
ZNRF3Q9ULT6 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.69□□□□□ -1.66
ZNRF3Q9ULT6 RPL31P12-201ENST00000422587 358 ntBASIC4.69□□□□□ -1.66
ZNRF3Q9ULT6 AL590632.1-201ENST00000424289 371 ntBASIC4.69□□□□□ -1.66
ZNRF3Q9ULT6 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.69□□□□□ -1.66
ZNRF3Q9ULT6 AC083863.1-201ENST00000438811 231 ntBASIC4.69□□□□□ -1.66
ZNRF3Q9ULT6 TXNP1-201ENST00000441872 371 ntBASIC4.69□□□□□ -1.66
ZNRF3Q9ULT6 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC4.69□□□□□ -1.66
ZNRF3Q9ULT6 RPL23AP31-201ENST00000456160 467 ntBASIC4.69□□□□□ -1.66
ZNRF3Q9ULT6 AP000942.1-201ENST00000463969 747 ntBASIC4.69□□□□□ -1.66
ZNRF3Q9ULT6 Y_RNA.708-201ENST00000516950 96 ntBASIC4.69□□□□□ -1.66
ZNRF3Q9ULT6 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC4.69□□□□□ -1.66
ZNRF3Q9ULT6 AC022634.1-201ENST00000520765 532 ntBASIC4.69□□□□□ -1.66
ZNRF3Q9ULT6 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.69□□□□□ -1.66
ZNRF3Q9ULT6 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.69□□□□□ -1.66
ZNRF3Q9ULT6 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.69□□□□□ -1.66
ZNRF3Q9ULT6 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.69□□□□□ -1.66
ZNRF3Q9ULT6 RMST_9.1-201ENST00000619945 193 ntBASIC4.69□□□□□ -1.66
ZNRF3Q9ULT6 AC098657.3-201ENST00000620434 263 ntBASIC4.69□□□□□ -1.66
ZNRF3Q9ULT6 uc_338.22-201ENST00000622722 187 ntBASIC4.69□□□□□ -1.66
ZNRF3Q9ULT6 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
ZNRF3Q9ULT6 AL136964.1-201ENST00000622038 2990 ntBASIC4.69□□□□□ -1.66
ZNRF3Q9ULT6 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
ZNRF3Q9ULT6 AC092435.4-201ENST00000623012 4159 ntBASIC4.69□□□□□ -1.66
ZNRF3Q9ULT6 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC4.69□□□□□ -1.66
ZNRF3Q9ULT6 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
ZNRF3Q9ULT6 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
ZNRF3Q9ULT6 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
ZNRF3Q9ULT6 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
ZNRF3Q9ULT6 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.68□□□□□ -1.66
ZNRF3Q9ULT6 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
ZNRF3Q9ULT6 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
ZNRF3Q9ULT6 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
ZNRF3Q9ULT6 Y_RNA.111-201ENST00000363248 100 ntBASIC4.68□□□□□ -1.66
ZNRF3Q9ULT6 Y_RNA.145-201ENST00000363527 102 ntBASIC4.68□□□□□ -1.66
ZNRF3Q9ULT6 MIR634-201ENST00000385208 97 ntBASIC4.68□□□□□ -1.66
ZNRF3Q9ULT6 RNU6-308P-201ENST00000390957 107 ntBASIC4.68□□□□□ -1.66
ZNRF3Q9ULT6 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
ZNRF3Q9ULT6 RN7SKP177-201ENST00000410567 355 ntBASIC4.68□□□□□ -1.66
ZNRF3Q9ULT6 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.68□□□□□ -1.66
ZNRF3Q9ULT6 AC063979.1-201ENST00000415539 377 ntBASIC4.68□□□□□ -1.66
ZNRF3Q9ULT6 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.68□□□□□ -1.66
ZNRF3Q9ULT6 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC4.68□□□□□ -1.66
ZNRF3Q9ULT6 AC073063.1-201ENST00000434352 607 ntBASIC4.68□□□□□ -1.66
ZNRF3Q9ULT6 MIR2053-201ENST00000459295 91 ntBASIC4.68□□□□□ -1.66
ZNRF3Q9ULT6 RNU7-138P-201ENST00000459479 64 ntBASIC4.68□□□□□ -1.66
ZNRF3Q9ULT6 AC087588.1-201ENST00000462203 316 ntBASIC4.68□□□□□ -1.66
ZNRF3Q9ULT6 AC022795.1-201ENST00000473808 480 ntBASIC4.68□□□□□ -1.66
ZNRF3Q9ULT6 AC096745.1-201ENST00000509945 370 ntBASIC4.68□□□□□ -1.66
ZNRF3Q9ULT6 APOOP4-201ENST00000513530 597 ntBASIC4.68□□□□□ -1.66
ZNRF3Q9ULT6 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.68□□□□□ -1.66
ZNRF3Q9ULT6 RNA5SP164-201ENST00000516533 110 ntBASIC4.68□□□□□ -1.66
ZNRF3Q9ULT6 RNU6-1213P-201ENST00000517075 94 ntBASIC4.68□□□□□ -1.66
ZNRF3Q9ULT6 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.68□□□□□ -1.66
ZNRF3Q9ULT6 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.68□□□□□ -1.66
ZNRF3Q9ULT6 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.68□□□□□ -1.66
ZNRF3Q9ULT6 NEAT1-202ENST00000501122 22743 ntBASIC4.68□□□□□ -1.66
ZNRF3Q9ULT6 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.68□□□□□ -1.66
ZNRF3Q9ULT6 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.68□□□□□ -1.66
ZNRF3Q9ULT6 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.68□□□□□ -1.66
ZNRF3Q9ULT6 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
ZNRF3Q9ULT6 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
ZNRF3Q9ULT6 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.68□□□□□ -1.66
ZNRF3Q9ULT6 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
ZNRF3Q9ULT6 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
ZNRF3Q9ULT6 AL049781.1-201ENST00000623195 3585 ntBASIC4.67□□□□□ -1.66
ZNRF3Q9ULT6 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
ZNRF3Q9ULT6 RNU6-371P-201ENST00000364283 108 ntBASIC4.67□□□□□ -1.66
ZNRF3Q9ULT6 RNU6-1303P-201ENST00000364841 107 ntBASIC4.67□□□□□ -1.66
ZNRF3Q9ULT6 RNU6-1040P-201ENST00000383974 107 ntBASIC4.67□□□□□ -1.66
ZNRF3Q9ULT6 Y_RNA.534-201ENST00000384599 112 ntBASIC4.67□□□□□ -1.66
ZNRF3Q9ULT6 Y_RNA.646-201ENST00000410980 101 ntBASIC4.67□□□□□ -1.66
ZNRF3Q9ULT6 RPL7P37-201ENST00000425095 738 ntBASIC4.67□□□□□ -1.66
ZNRF3Q9ULT6 AL592045.1-201ENST00000429867 352 ntBASIC4.67□□□□□ -1.66
ZNRF3Q9ULT6 CYCSP32-201ENST00000440548 321 ntBASIC4.67□□□□□ -1.66
ZNRF3Q9ULT6 SNORA59A-201ENST00000459326 152 ntBASIC4.67□□□□□ -1.66
ZNRF3Q9ULT6 RPL5P30-201ENST00000465511 891 ntBASIC4.67□□□□□ -1.66
ZNRF3Q9ULT6 AC084198.1-201ENST00000477747 402 ntBASIC4.67□□□□□ -1.66
ZNRF3Q9ULT6 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.67□□□□□ -1.66
ZNRF3Q9ULT6 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.67□□□□□ -1.66
ZNRF3Q9ULT6 RNU6-976P-201ENST00000516086 111 ntBASIC4.67□□□□□ -1.66
ZNRF3Q9ULT6 AC022695.1-201ENST00000522089 237 ntBASIC4.67□□□□□ -1.66
ZNRF3Q9ULT6 MIR3921-201ENST00000577308 85 ntBASIC4.67□□□□□ -1.66
ZNRF3Q9ULT6 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.67□□□□□ -1.66
ZNRF3Q9ULT6 AC073539.2-201ENST00000597113 165 ntBASIC4.67□□□□□ -1.66
ZNRF3Q9ULT6 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC4.67□□□□□ -1.66
ZNRF3Q9ULT6 AC005000.2-201ENST00000605468 310 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 132.1 ms