Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC4.56□□□□□ -1.68
VTI1BQ9UEU0 AC007656.2-201ENST00000624902 4547 ntBASIC4.56□□□□□ -1.68
VTI1BQ9UEU0 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VTI1BQ9UEU0 SRP72P2-201ENST00000344851 1979 ntBASIC4.56□□□□□ -1.68
VTI1BQ9UEU0 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.56□□□□□ -1.68
VTI1BQ9UEU0 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VTI1BQ9UEU0 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
VTI1BQ9UEU0 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
VTI1BQ9UEU0 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
VTI1BQ9UEU0 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
VTI1BQ9UEU0 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
VTI1BQ9UEU0 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VTI1BQ9UEU0 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
VTI1BQ9UEU0 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VTI1BQ9UEU0 Y_RNA.133-201ENST00000363428 110 ntBASIC4.55□□□□□ -1.68
VTI1BQ9UEU0 RNU6-1035P-201ENST00000384477 107 ntBASIC4.55□□□□□ -1.68
VTI1BQ9UEU0 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VTI1BQ9UEU0 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.55□□□□□ -1.68
VTI1BQ9UEU0 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.55□□□□□ -1.68
VTI1BQ9UEU0 MTCYBP10-201ENST00000424905 650 ntBASIC4.55□□□□□ -1.68
VTI1BQ9UEU0 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.55□□□□□ -1.68
VTI1BQ9UEU0 HMGB3P8-201ENST00000449709 577 ntBASIC4.55□□□□□ -1.68
VTI1BQ9UEU0 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.55□□□□□ -1.68
VTI1BQ9UEU0 RPL7AP28-201ENST00000464513 571 ntBASIC4.55□□□□□ -1.68
VTI1BQ9UEU0 AC084357.1-201ENST00000473404 255 ntBASIC4.55□□□□□ -1.68
VTI1BQ9UEU0 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.55□□□□□ -1.68
VTI1BQ9UEU0 AP005902.1-201ENST00000521358 186 ntBASIC4.55□□□□□ -1.68
VTI1BQ9UEU0 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.55□□□□□ -1.68
VTI1BQ9UEU0 AC011602.1-201ENST00000546484 331 ntBASIC4.55□□□□□ -1.68
VTI1BQ9UEU0 AC133555.2-201ENST00000550213 292 ntBASIC4.55□□□□□ -1.68
VTI1BQ9UEU0 MIR4436B2-201ENST00000581415 91 ntBASIC4.55□□□□□ -1.68
VTI1BQ9UEU0 MIR4436B1-201ENST00000583272 91 ntBASIC4.55□□□□□ -1.68
VTI1BQ9UEU0 AL049539.1-201ENST00000611964 459 ntBASIC4.55□□□□□ -1.68
VTI1BQ9UEU0 MIR7154-201ENST00000620673 73 ntBASIC4.55□□□□□ -1.68
VTI1BQ9UEU0 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
VTI1BQ9UEU0 CUL1P1-201ENST00000509510 2425 ntBASIC4.55□□□□□ -1.68
VTI1BQ9UEU0 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.55□□□□□ -1.68
VTI1BQ9UEU0 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VTI1BQ9UEU0 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
VTI1BQ9UEU0 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VTI1BQ9UEU0 AC005592.1-201ENST00000566527 1640 ntBASIC4.54□□□□□ -1.68
VTI1BQ9UEU0 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.54□□□□□ -1.68
VTI1BQ9UEU0 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.54□□□□□ -1.68
VTI1BQ9UEU0 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.54□□□□□ -1.68
VTI1BQ9UEU0 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.54□□□□□ -1.68
VTI1BQ9UEU0 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.54□□□□□ -1.68
VTI1BQ9UEU0 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
VTI1BQ9UEU0 Y_RNA.48-201ENST00000362710 103 ntBASIC4.54□□□□□ -1.68
VTI1BQ9UEU0 RNU6-884P-201ENST00000363889 107 ntBASIC4.54□□□□□ -1.68
VTI1BQ9UEU0 Y_RNA.577-201ENST00000384794 101 ntBASIC4.54□□□□□ -1.68
VTI1BQ9UEU0 MIR518D-201ENST00000385014 87 ntBASIC4.54□□□□□ -1.68
VTI1BQ9UEU0 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VTI1BQ9UEU0 RPS29P13-201ENST00000402041 169 ntBASIC4.54□□□□□ -1.68
VTI1BQ9UEU0 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.54□□□□□ -1.68
VTI1BQ9UEU0 EIF4EP2-201ENST00000422816 654 ntBASIC4.54□□□□□ -1.68
VTI1BQ9UEU0 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.54□□□□□ -1.68
VTI1BQ9UEU0 CEP57L1P1-201ENST00000430943 1201 ntBASIC4.54□□□□□ -1.68
VTI1BQ9UEU0 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.54□□□□□ -1.68
VTI1BQ9UEU0 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.54□□□□□ -1.68
VTI1BQ9UEU0 HIGD1AP2-201ENST00000446367 280 ntBASIC4.54□□□□□ -1.68
VTI1BQ9UEU0 BTF3P15-201ENST00000455606 336 ntBASIC4.54□□□□□ -1.68
VTI1BQ9UEU0 RNA5SP310-201ENST00000459084 116 ntBASIC4.54□□□□□ -1.68
VTI1BQ9UEU0 AC092324.1-201ENST00000468671 324 ntBASIC4.54□□□□□ -1.68
VTI1BQ9UEU0 AL132838.2-201ENST00000492041 314 ntBASIC4.54□□□□□ -1.68
VTI1BQ9UEU0 AC008897.1-201ENST00000494006 347 ntBASIC4.54□□□□□ -1.68
VTI1BQ9UEU0 AC015911.1-201ENST00000495111 156 ntBASIC4.54□□□□□ -1.68
VTI1BQ9UEU0 UBE2CP3-201ENST00000502715 450 ntBASIC4.54□□□□□ -1.68
VTI1BQ9UEU0 RNU6-764P-201ENST00000516396 105 ntBASIC4.54□□□□□ -1.68
VTI1BQ9UEU0 RNA5SP309-201ENST00000516670 106 ntBASIC4.54□□□□□ -1.68
VTI1BQ9UEU0 RNU6-612P-201ENST00000516909 102 ntBASIC4.54□□□□□ -1.68
VTI1BQ9UEU0 AP004607.1-201ENST00000524456 203 ntBASIC4.54□□□□□ -1.68
VTI1BQ9UEU0 AP000889.1-201ENST00000530968 660 ntBASIC4.54□□□□□ -1.68
VTI1BQ9UEU0 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
VTI1BQ9UEU0 LINC00933-203ENST00000559812 219 ntBASIC4.54□□□□□ -1.68
VTI1BQ9UEU0 MTND6P33-201ENST00000571794 183 ntBASIC4.54□□□□□ -1.68
VTI1BQ9UEU0 MIR4737-201ENST00000583979 81 ntBASIC4.54□□□□□ -1.68
VTI1BQ9UEU0 AC012468.1-201ENST00000604888 430 ntBASIC4.54□□□□□ -1.68
VTI1BQ9UEU0 AC008962.1-201ENST00000605729 304 ntBASIC4.54□□□□□ -1.68
VTI1BQ9UEU0 AL162373.1-201ENST00000620433 407 ntBASIC4.54□□□□□ -1.68
VTI1BQ9UEU0 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
VTI1BQ9UEU0 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.54□□□□□ -1.68
VTI1BQ9UEU0 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.54□□□□□ -1.68
VTI1BQ9UEU0 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
VTI1BQ9UEU0 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.54□□□□□ -1.68
VTI1BQ9UEU0 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VTI1BQ9UEU0 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
VTI1BQ9UEU0 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
VTI1BQ9UEU0 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.53□□□□□ -1.68
VTI1BQ9UEU0 AL353746.1-201ENST00000566293 6881 ntBASIC4.53□□□□□ -1.68
VTI1BQ9UEU0 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.53□□□□□ -1.68
VTI1BQ9UEU0 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.53□□□□□ -1.68
VTI1BQ9UEU0 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.53□□□□□ -1.68
VTI1BQ9UEU0 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VTI1BQ9UEU0 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VTI1BQ9UEU0 RNY1P16-201ENST00000363063 111 ntBASIC4.53□□□□□ -1.68
VTI1BQ9UEU0 RNU6-1309P-201ENST00000363305 108 ntBASIC4.53□□□□□ -1.68
VTI1BQ9UEU0 RNA5SP28-201ENST00000363841 119 ntBASIC4.53□□□□□ -1.68
VTI1BQ9UEU0 RN7SKP280-201ENST00000364196 304 ntBASIC4.53□□□□□ -1.68
VTI1BQ9UEU0 RNU6-336P-201ENST00000364891 107 ntBASIC4.53□□□□□ -1.68
VTI1BQ9UEU0 RNA5SP22-201ENST00000365393 109 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms