Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AC008413.1-201ENST00000511864 177 ntBASIC2.93□□□□□ -1.94
CLIP2Q9UDT6 TTC39CP1-201ENST00000512513 755 ntBASIC2.93□□□□□ -1.94
CLIP2Q9UDT6 RNU6-1256P-201ENST00000516539 103 ntBASIC2.93□□□□□ -1.94
CLIP2Q9UDT6 AC060788.1-201ENST00000521318 469 ntBASIC2.93□□□□□ -1.94
CLIP2Q9UDT6 HMGN1P28-201ENST00000521340 364 ntBASIC2.93□□□□□ -1.94
CLIP2Q9UDT6 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.93□□□□□ -1.94
CLIP2Q9UDT6 AP003122.3-201ENST00000526316 255 ntBASIC2.93□□□□□ -1.94
CLIP2Q9UDT6 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.93□□□□□ -1.94
CLIP2Q9UDT6 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.93□□□□□ -1.94
CLIP2Q9UDT6 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.93□□□□□ -1.94
CLIP2Q9UDT6 AC009163.5-201ENST00000575421 637 ntBASIC2.93□□□□□ -1.94
CLIP2Q9UDT6 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.93□□□□□ -1.94
CLIP2Q9UDT6 AC090616.2-202ENST00000584248 222 ntBASIC2.93□□□□□ -1.94
CLIP2Q9UDT6 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.93□□□□□ -1.94
CLIP2Q9UDT6 AL031281.1-201ENST00000604049 488 ntBASIC2.93□□□□□ -1.94
CLIP2Q9UDT6 AL049779.4-201ENST00000604500 156 ntBASIC2.93□□□□□ -1.94
CLIP2Q9UDT6 AL136363.1-201ENST00000605349 337 ntBASIC2.93□□□□□ -1.94
CLIP2Q9UDT6 AL136981.2-201ENST00000617319 734 ntBASIC2.93□□□□□ -1.94
CLIP2Q9UDT6 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.93□□□□□ -1.94
CLIP2Q9UDT6 AC079597.1-201ENST00000624306 508 ntBASIC2.93□□□□□ -1.94
CLIP2Q9UDT6 CTSLP2-204ENST00000629029 392 ntBASIC2.93□□□□□ -1.94
CLIP2Q9UDT6 AC022336.2-201ENST00000568966 2538 ntBASIC2.93□□□□□ -1.94
CLIP2Q9UDT6 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.93□□□□□ -1.94
CLIP2Q9UDT6 AL049641.1-201ENST00000441055 1948 ntBASIC2.93□□□□□ -1.94
CLIP2Q9UDT6 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
CLIP2Q9UDT6 ZNF271P-202ENST00000465539 1970 ntBASIC2.92□□□□□ -1.94
CLIP2Q9UDT6 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CLIP2Q9UDT6 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.92□□□□□ -1.94
CLIP2Q9UDT6 AL138713.1-201ENST00000624026 2130 ntBASIC2.92□□□□□ -1.94
CLIP2Q9UDT6 AC007785.2-201ENST00000598627 1916 ntBASIC2.92□□□□□ -1.94
CLIP2Q9UDT6 RNA5SP289-201ENST00000362332 137 ntBASIC2.92□□□□□ -1.94
CLIP2Q9UDT6 RNU6-223P-201ENST00000362830 107 ntBASIC2.92□□□□□ -1.94
CLIP2Q9UDT6 Y_RNA.77-201ENST00000362962 107 ntBASIC2.92□□□□□ -1.94
CLIP2Q9UDT6 SNORA23-201ENST00000365128 182 ntBASIC2.92□□□□□ -1.94
CLIP2Q9UDT6 RNU1-100P-201ENST00000365255 165 ntBASIC2.92□□□□□ -1.94
CLIP2Q9UDT6 OR5H15-201ENST00000383696 930 ntBASIC2.92□□□□□ -1.94
CLIP2Q9UDT6 RNU6-1035P-201ENST00000384477 107 ntBASIC2.92□□□□□ -1.94
CLIP2Q9UDT6 Y_RNA.559-201ENST00000384686 107 ntBASIC2.92□□□□□ -1.94
CLIP2Q9UDT6 MIR320C1-201ENST00000408566 88 ntBASIC2.92□□□□□ -1.94
CLIP2Q9UDT6 RNU6-648P-201ENST00000410190 107 ntBASIC2.92□□□□□ -1.94
CLIP2Q9UDT6 MTCO1P17-201ENST00000411522 491 ntBASIC2.92□□□□□ -1.94
CLIP2Q9UDT6 PIGPP2-201ENST00000411569 458 ntBASIC2.92□□□□□ -1.94
CLIP2Q9UDT6 AC080125.1-201ENST00000414888 684 ntBASIC2.92□□□□□ -1.94
CLIP2Q9UDT6 Z85995.1-201ENST00000415547 335 ntBASIC2.92□□□□□ -1.94
CLIP2Q9UDT6 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.92□□□□□ -1.94
CLIP2Q9UDT6 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CLIP2Q9UDT6 AC092427.1-202ENST00000430569 476 ntBASIC2.92□□□□□ -1.94
CLIP2Q9UDT6 MTCYBP3-201ENST00000445588 1137 ntBASIC2.92□□□□□ -1.94
CLIP2Q9UDT6 AL606662.1-201ENST00000445763 553 ntBASIC2.92□□□□□ -1.94
CLIP2Q9UDT6 AP000542.1-201ENST00000448473 371 ntBASIC2.92□□□□□ -1.94
CLIP2Q9UDT6 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.92□□□□□ -1.94
CLIP2Q9UDT6 MTND2P24-201ENST00000453434 806 ntBASIC2.92□□□□□ -1.94
CLIP2Q9UDT6 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CLIP2Q9UDT6 AC034222.1-201ENST00000494052 532 ntBASIC2.92□□□□□ -1.94
CLIP2Q9UDT6 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC2.92□□□□□ -1.94
CLIP2Q9UDT6 RPL37P25-201ENST00000507308 276 ntBASIC2.92□□□□□ -1.94
CLIP2Q9UDT6 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.92□□□□□ -1.94
CLIP2Q9UDT6 RNU6-928P-201ENST00000516876 104 ntBASIC2.92□□□□□ -1.94
CLIP2Q9UDT6 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.92□□□□□ -1.94
CLIP2Q9UDT6 MTND1P5-201ENST00000517906 940 ntBASIC2.92□□□□□ -1.94
CLIP2Q9UDT6 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.92□□□□□ -1.94
CLIP2Q9UDT6 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.92□□□□□ -1.94
CLIP2Q9UDT6 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.92□□□□□ -1.94
CLIP2Q9UDT6 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.92□□□□□ -1.94
CLIP2Q9UDT6 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CLIP2Q9UDT6 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CLIP2Q9UDT6 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC2.92□□□□□ -1.94
CLIP2Q9UDT6 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC2.92□□□□□ -1.94
CLIP2Q9UDT6 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.92□□□□□ -1.94
CLIP2Q9UDT6 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.92□□□□□ -1.94
CLIP2Q9UDT6 AC010546.1-201ENST00000569391 485 ntBASIC2.92□□□□□ -1.94
CLIP2Q9UDT6 AC136618.2-201ENST00000575091 400 ntBASIC2.92□□□□□ -1.94
CLIP2Q9UDT6 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.92□□□□□ -1.94
CLIP2Q9UDT6 AC078795.2-201ENST00000602835 1252 ntBASIC2.92□□□□□ -1.94
CLIP2Q9UDT6 AC103710.4-201ENST00000609301 899 ntBASIC2.92□□□□□ -1.94
CLIP2Q9UDT6 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CLIP2Q9UDT6 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.92□□□□□ -1.94
CLIP2Q9UDT6 AC025034.2-201ENST00000623264 286 ntBASIC2.92□□□□□ -1.94
CLIP2Q9UDT6 AC073308.1-201ENST00000623696 305 ntBASIC2.92□□□□□ -1.94
CLIP2Q9UDT6 AF246928.1-201ENST00000623768 87 ntBASIC2.92□□□□□ -1.94
CLIP2Q9UDT6 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC2.92□□□□□ -1.94
CLIP2Q9UDT6 AC019226.1-201ENST00000625666 515 ntBASIC2.92□□□□□ -1.94
CLIP2Q9UDT6 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.92□□□□□ -1.94
CLIP2Q9UDT6 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.92□□□□□ -1.94
CLIP2Q9UDT6 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CLIP2Q9UDT6 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
CLIP2Q9UDT6 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CLIP2Q9UDT6 Y_RNA.41-201ENST00000362646 102 ntBASIC2.91□□□□□ -1.94
CLIP2Q9UDT6 RNU6-1200P-201ENST00000384162 107 ntBASIC2.91□□□□□ -1.94
CLIP2Q9UDT6 MIR325-201ENST00000385260 98 ntBASIC2.91□□□□□ -1.94
CLIP2Q9UDT6 MIR767-201ENST00000390228 109 ntBASIC2.91□□□□□ -1.94
CLIP2Q9UDT6 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CLIP2Q9UDT6 MTCO3P30-201ENST00000426425 670 ntBASIC2.91□□□□□ -1.94
CLIP2Q9UDT6 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.91□□□□□ -1.94
CLIP2Q9UDT6 AL512844.2-201ENST00000433990 593 ntBASIC2.91□□□□□ -1.94
CLIP2Q9UDT6 CR769767.1-201ENST00000436337 346 ntBASIC2.91□□□□□ -1.94
CLIP2Q9UDT6 MTCO1P19-201ENST00000443487 500 ntBASIC2.91□□□□□ -1.94
CLIP2Q9UDT6 RPL7P36-201ENST00000444633 681 ntBASIC2.91□□□□□ -1.94
CLIP2Q9UDT6 CBWD4P-201ENST00000445695 655 ntBASIC2.91□□□□□ -1.94
CLIP2Q9UDT6 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms