Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 RSL24D1P6-201ENST00000426934 401 ntBASIC4.27□□□□□ -1.73
PPARGC1AQ9UBK2 AL035666.1-201ENST00000446195 348 ntBASIC4.27□□□□□ -1.73
PPARGC1AQ9UBK2 SNORD5.1-201ENST00000458800 75 ntBASIC4.27□□□□□ -1.73
PPARGC1AQ9UBK2 AC104472.2-201ENST00000469035 601 ntBASIC4.27□□□□□ -1.73
PPARGC1AQ9UBK2 RN7SL604P-201ENST00000492589 296 ntBASIC4.27□□□□□ -1.73
PPARGC1AQ9UBK2 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
PPARGC1AQ9UBK2 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PPARGC1AQ9UBK2 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.27□□□□□ -1.73
PPARGC1AQ9UBK2 SNORA31.9-201ENST00000516429 84 ntBASIC4.27□□□□□ -1.73
PPARGC1AQ9UBK2 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.27□□□□□ -1.73
PPARGC1AQ9UBK2 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC4.27□□□□□ -1.73
PPARGC1AQ9UBK2 AC018555.1-201ENST00000567548 1980 ntBASIC4.27□□□□□ -1.73
PPARGC1AQ9UBK2 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PPARGC1AQ9UBK2 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.27□□□□□ -1.73
PPARGC1AQ9UBK2 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PPARGC1AQ9UBK2 USP8P1-201ENST00000494673 3183 ntBASIC4.26□□□□□ -1.73
PPARGC1AQ9UBK2 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
PPARGC1AQ9UBK2 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PPARGC1AQ9UBK2 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PPARGC1AQ9UBK2 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PPARGC1AQ9UBK2 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.26□□□□□ -1.73
PPARGC1AQ9UBK2 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PPARGC1AQ9UBK2 RNU6-629P-201ENST00000384061 103 ntBASIC4.26□□□□□ -1.73
PPARGC1AQ9UBK2 MIR514A1-201ENST00000385133 98 ntBASIC4.26□□□□□ -1.73
PPARGC1AQ9UBK2 MIR301A-201ENST00000385261 86 ntBASIC4.26□□□□□ -1.73
PPARGC1AQ9UBK2 SNORA75.6-201ENST00000391318 127 ntBASIC4.26□□□□□ -1.73
PPARGC1AQ9UBK2 MIR1290-201ENST00000408735 78 ntBASIC4.26□□□□□ -1.73
PPARGC1AQ9UBK2 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC4.26□□□□□ -1.73
PPARGC1AQ9UBK2 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.26□□□□□ -1.73
PPARGC1AQ9UBK2 RPL21P90-201ENST00000415692 466 ntBASIC4.26□□□□□ -1.73
PPARGC1AQ9UBK2 RAC1P3-201ENST00000416129 580 ntBASIC4.26□□□□□ -1.73
PPARGC1AQ9UBK2 AC108032.1-201ENST00000416706 207 ntBASIC4.26□□□□□ -1.73
PPARGC1AQ9UBK2 CYP4F29P-201ENST00000420685 446 ntBASIC4.26□□□□□ -1.73
PPARGC1AQ9UBK2 HIGD1AP11-201ENST00000438361 280 ntBASIC4.26□□□□□ -1.73
PPARGC1AQ9UBK2 AL360271.2-201ENST00000447710 161 ntBASIC4.26□□□□□ -1.73
PPARGC1AQ9UBK2 RPS24P6-201ENST00000452670 400 ntBASIC4.26□□□□□ -1.73
PPARGC1AQ9UBK2 MTND5P22-201ENST00000458380 195 ntBASIC4.26□□□□□ -1.73
PPARGC1AQ9UBK2 AC084198.1-201ENST00000477747 402 ntBASIC4.26□□□□□ -1.73
PPARGC1AQ9UBK2 HMGB1P22-201ENST00000505315 124 ntBASIC4.26□□□□□ -1.73
PPARGC1AQ9UBK2 AC008716.1-201ENST00000511084 513 ntBASIC4.26□□□□□ -1.73
PPARGC1AQ9UBK2 AC026782.1-201ENST00000512952 449 ntBASIC4.26□□□□□ -1.73
PPARGC1AQ9UBK2 SCARNA15.2-201ENST00000516409 127 ntBASIC4.26□□□□□ -1.73
PPARGC1AQ9UBK2 RNU6-307P-201ENST00000516743 106 ntBASIC4.26□□□□□ -1.73
PPARGC1AQ9UBK2 RNU6-1073P-201ENST00000517182 106 ntBASIC4.26□□□□□ -1.73
PPARGC1AQ9UBK2 RN7SKP295-201ENST00000517264 153 ntBASIC4.26□□□□□ -1.73
PPARGC1AQ9UBK2 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PPARGC1AQ9UBK2 ATP5F1P5-201ENST00000526403 760 ntBASIC4.26□□□□□ -1.73
PPARGC1AQ9UBK2 PARP1P2-201ENST00000556806 195 ntBASIC4.26□□□□□ -1.73
PPARGC1AQ9UBK2 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.26□□□□□ -1.73
PPARGC1AQ9UBK2 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.26□□□□□ -1.73
PPARGC1AQ9UBK2 AC103858.2-201ENST00000621471 543 ntBASIC4.26□□□□□ -1.73
PPARGC1AQ9UBK2 AC008785.1-201ENST00000624475 456 ntBASIC4.26□□□□□ -1.73
PPARGC1AQ9UBK2 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.26□□□□□ -1.73
PPARGC1AQ9UBK2 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.26□□□□□ -1.73
PPARGC1AQ9UBK2 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.26□□□□□ -1.73
PPARGC1AQ9UBK2 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PPARGC1AQ9UBK2 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PPARGC1AQ9UBK2 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PPARGC1AQ9UBK2 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
PPARGC1AQ9UBK2 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
PPARGC1AQ9UBK2 Y_RNA.144-201ENST00000363521 113 ntBASIC4.25□□□□□ -1.73
PPARGC1AQ9UBK2 Y_RNA.252-201ENST00000364556 101 ntBASIC4.25□□□□□ -1.73
PPARGC1AQ9UBK2 RNU6-1050P-201ENST00000410388 107 ntBASIC4.25□□□□□ -1.73
PPARGC1AQ9UBK2 RNU6-607P-201ENST00000411283 108 ntBASIC4.25□□□□□ -1.73
PPARGC1AQ9UBK2 RNU2-71P-201ENST00000411395 189 ntBASIC4.25□□□□□ -1.73
PPARGC1AQ9UBK2 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC4.25□□□□□ -1.73
PPARGC1AQ9UBK2 AL353621.1-201ENST00000418219 243 ntBASIC4.25□□□□□ -1.73
PPARGC1AQ9UBK2 HSPD1P21-201ENST00000436541 245 ntBASIC4.25□□□□□ -1.73
PPARGC1AQ9UBK2 AC006011.1-201ENST00000442758 349 ntBASIC4.25□□□□□ -1.73
PPARGC1AQ9UBK2 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.25□□□□□ -1.73
PPARGC1AQ9UBK2 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.25□□□□□ -1.73
PPARGC1AQ9UBK2 RPS20P22-201ENST00000473700 357 ntBASIC4.25□□□□□ -1.73
PPARGC1AQ9UBK2 AC006517.1-201ENST00000480485 328 ntBASIC4.25□□□□□ -1.73
PPARGC1AQ9UBK2 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.25□□□□□ -1.73
PPARGC1AQ9UBK2 HMGB1P30-201ENST00000492455 606 ntBASIC4.25□□□□□ -1.73
PPARGC1AQ9UBK2 AC009901.1-201ENST00000506703 541 ntBASIC4.25□□□□□ -1.73
PPARGC1AQ9UBK2 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.25□□□□□ -1.73
PPARGC1AQ9UBK2 RNU6-143P-201ENST00000516942 93 ntBASIC4.25□□□□□ -1.73
PPARGC1AQ9UBK2 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.25□□□□□ -1.73
PPARGC1AQ9UBK2 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC4.25□□□□□ -1.73
PPARGC1AQ9UBK2 AC025423.5-201ENST00000550230 219 ntBASIC4.25□□□□□ -1.73
PPARGC1AQ9UBK2 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PPARGC1AQ9UBK2 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.25□□□□□ -1.73
PPARGC1AQ9UBK2 AC002545.1-201ENST00000592511 181 ntBASIC4.25□□□□□ -1.73
PPARGC1AQ9UBK2 AC073539.2-201ENST00000597113 165 ntBASIC4.25□□□□□ -1.73
PPARGC1AQ9UBK2 AC002044.1-201ENST00000606707 158 ntBASIC4.25□□□□□ -1.73
PPARGC1AQ9UBK2 DLEU2_5.1-201ENST00000615567 84 ntBASIC4.25□□□□□ -1.73
PPARGC1AQ9UBK2 AL031601.2-202ENST00000622650 282 ntBASIC4.25□□□□□ -1.73
PPARGC1AQ9UBK2 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PPARGC1AQ9UBK2 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
PPARGC1AQ9UBK2 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PPARGC1AQ9UBK2 AL049641.1-201ENST00000441055 1948 ntBASIC4.25□□□□□ -1.73
PPARGC1AQ9UBK2 ZNF285B-201ENST00000561698 1767 ntBASIC4.25□□□□□ -1.73
PPARGC1AQ9UBK2 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PPARGC1AQ9UBK2 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.24□□□□□ -1.73
PPARGC1AQ9UBK2 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PPARGC1AQ9UBK2 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4.24□□□□□ -1.73
PPARGC1AQ9UBK2 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.24□□□□□ -1.73
PPARGC1AQ9UBK2 UBE2L2-201ENST00000254302 429 ntBASIC4.24□□□□□ -1.73
PPARGC1AQ9UBK2 SNORA60-201ENST00000362396 134 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms